BAC Information

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BAC

Clone NameB6Ng01-096B24
Chromosome4 (Build37)
Map Location 89,257,151 - 89,258,272
singlet/doubletsinglet
Overlap genenone
Upstream geneC87499, Ifna13, LOC546834, OTTMUSG00000011275, Ifna2, Ifnab, LOC546835, Klhl9, LOC100040477, Ifnz, LOC100041062, EG545645, LOC668147, OTTMUSG00000011291, OTTMUSG00000011290, OTTMUSG00000011265, Ifnz, OTTMUSG00000011269, OTTMUSG00000011270, OTTMUSG00000011272, OTTMUSG00000011268, OTTMUSG00000011273, OTTMUSG00000011282, OTTMUSG00000011285, OTTMUSG00000011289, Ifna7, Ifna11, Ifna6, Ifna5, Ifna4, Ifna1, Ifne1, LOC100040617, Mtap, LOC625574, Cdkn2a, Cdkn2b, LOC664785
Downstream geneDmrta1, Zfp352, LOC619842, LOC435792
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096B24.bB6Ng01-096B24.g
ACCDH906874DH906875
length1,1201,157
definitionDH906874|Mus musculus domesticus DNA, BAC clone: B6Ng01-096B24, 5' end.DH906875|Mus musculus domesticus DNA, BAC clone: B6Ng01-096B24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctatattttgatccaaatactatttacccagattgtaaaagtgg
tgctttagtcttctggtctgcattgtaacaataccatgagtgatgcctac
tccatttcttatagaacaaaatcattatttactttcttttcagtaagcag
atgacatgtattaacactgtgaaggcccaagggataaactcataaactgt
aaatttaagaatcacttagtttgatgaatctctcctgtgttgctgacata
cccagaacctcagaatgttctcatatttggacatgaggctttaaagggat
ggggaagttaagtaaagctgttagaatgagccccagtccgttcagactga
cttttctataaaatgaagaagatgggagaaatacattatgaaatgcacag
aacaaagacaacatggaaatgctgagaagctaccactgaggaccgagaaa
aaagccattggggaaccaaacccacaactgctgtgatctcaactttgttt
ctagaattgtgtgcaaatgaatgtcttttaagttctctttgtttaaatat
atgtgaccttctgttattatttatccttagtcaatgaagaaaaattatct
ttcccaattgttgaccagatatttcactagtgggtttactctctgcgtga
ccaactaaaagtatatttggagcatgaccagactaggacaggtagccatc
ttaaaaaaaattgaatcattcactgcctcaggaaaccaatattactaaag
tatttgtcagtgaattttgaagaaatgatgatcactttaaaggtaaaaca
gagaagagagaatatagtttatactgtcttcttcactgtttggaaaattc
cagtcctgactttgatgtgaagagacaacaacatgaacttctgcctcatg
gatgtaatttggtcaagttgcctctatttattgactatatttttttatgg
tgatctttatgatgtatcaccttggctaagctacagtcaatgattattta
atacacattaattctagacattgttgctataggtgtttctaggatgtgaa
taagtatactatcaattactaacgggcttaactagggctttatgcagaat
ctgtgaactggactgattta
gaattctgcactaaacccatctggtcctgggctttttttggctgggagac
tattaatgactgcttctatttctttaggggatatgggactgttaagatca
ttaccttgatcctgatttaactttggtacctggtgtctgtctagaaattc
gtccatttcatccaggttttccagttttgttgagtataaccttttgtaga
aggatctgatggtgctttaaattacttcaggatttgttgttatgtctccc
ttttcatttctgattttgttaattaggatgttgtccctatgccctctagt
gagtctagctaaggatttatctatcttgttgattttcccaaagaaccaac
tcctcgtttggttaattctttgaatagttgttgtttaaacttggttgatt
tcacccccctgagtttgattatttcctgccatctactcctcttgggtgaa
tttgcttcctttttttctagagcttttagatgtgttgtcaagtagctagt
atgtgttctctccagtttctttttggaggcactcagagctatgagtttcc
ctcttagaaatgctttcattgtgtcccataagtttgggtatgttgtggct
tcattttcattaaactccaaaaagtctttaatttctttctttattccttc
cttgaccaaggtatcattgagaagagtgttattcagtttctacatgaatg
ttggcgttccattatttatgttgttattgaagatcagccttagtccatgg
tggtctgataggatgcataagacaattttcaatatttatgtatctgttga
ggccttgtttttggtcaattttggaaaaggtctctgtgaaggtgctgaga
agaaggtatatcctttttgttttaaggaataaaatgttctgtagatatct
gttaagtctgtttgtttcataacttctgttagctttcactgtgtcctgtt
tagtttctgtttccaccgatcttgtcattgatgaagtgggtgtgttggaa
gtctcccactactatggtgtgaggtgccatgggtgcgttgagctttacta
aggtcctttatgaatgtggctgccttgacatgtggagccataaaattacg
atgtaagttctctggagattttatttagatggagtatgatgcagtctccg
tgtacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_89257151_89258272
seq2: B6Ng01-096B24.b_44_1163

seq1  GAATTCCTATATTTTGATCCAAATACTATTTACCCAGATTGTAAAAGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATATTTTGATCCAAATACTATTTACCCAGATTGTAAAAGTGG  50

seq1  TGCTTTAGTCTTCTGGTCTGCATTGTAACAATACCATGAGTGATGCCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTAGTCTTCTGGTCTGCATTGTAACAATACCATGAGTGATGCCTAC  100

seq1  TCCATTTCTTATAGAACAAAATCATTATTTACTTTCTTTTCAGTAAGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTCTTATAGAACAAAATCATTATTTACTTTCTTTTCAGTAAGCAG  150

seq1  ATGACATGTATTAACACTGTGAAGGCCCAAGGGATAAACTCATAAACTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATGTATTAACACTGTGAAGGCCCAAGGGATAAACTCATAAACTGT  200

seq1  AAATTTAAGAATCACTTAGTTTGATGAATCTCTCCTGTGTTGCTGACATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAAGAATCACTTAGTTTGATGAATCTCTCCTGTGTTGCTGACATA  250

seq1  CCCAGAACCTCAGAATGTTCTCATATTTGGACATGAGGCTTTAAAGGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAACCTCAGAATGTTCTCATATTTGGACATGAGGCTTTAAAGGGAT  300

seq1  GGGGAAGTTAAGTAAAGCTGTTAGAATGAGCCCCAGTCCGTTCAGACTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAGTTAAGTAAAGCTGTTAGAATGAGCCCCAGTCCGTTCAGACTGA  350

seq1  CTTTTCTATAAAATGAAGAAGATGGGAGAAATACATTATGAAATGCACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTATAAAATGAAGAAGATGGGAGAAATACATTATGAAATGCACAG  400

seq1  AACAAAGACAACATGGAAATGCTGAGAAGCTACCACTGAGGACCGAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGACAACATGGAAATGCTGAGAAGCTACCACTGAGGACCGAGAAA  450

seq1  AAAGCCATTGGGGAACCAAACCCACAACTGCTGTGATCTCAACTTTGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCATTGGGGAACCAAACCCACAACTGCTGTGATCTCAACTTTGTTT  500

seq1  CTAGAATTGTGTGCAAATGAATGTCTTTTAAGTTCTCTTTGTTTAAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAATTGTGTGCAAATGAATGTCTTTTAAGTTCTCTTTGTTTAAATAT  550

seq1  ATGTGACCTTCTGTTATTATTTATCCTTAGTCAATGAAGAAAAATTATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGACCTTCTGTTATTATTTATCCTTAGTCAATGAAGAAAAATTATCT  600

seq1  TTCCCAATTGTTGACCAGATATTTCACTAGTGGGTTTACTCTCTGCGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAATTGTTGACCAGATATTTCACTAGTGGGTTTACTCTCTGCGTGA  650

seq1  CCAACTAAAAGTATATTTGGAGCATGACCAGACTAGGACAGGTAGCCATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTAAAAGTATATTTGGAGCATGACCAGACTAGGACAGGTAGCCATC  700

seq1  TT-AAAAAAATTGAATCATTCACTGCCTCAGGAAACCAATATTACTAAAG  749
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAAAATTGAATCATTCACTGCCTCAGGAAACCAATATTACTAAAG  750

seq1  TATTTGTCAGTGAATTTTGAAGAAATGATGATCACTTTAAAGGTAAAACA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTCAGTGAATTTTGAAGAAATGATGATCACTTTAAAGGTAAAACA  800

seq1  GAGAAGAGAGAATATAGTTTATACTGTCTTCTTCACTGTTTGGAAAATTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAGAGAATATAGTTTATACTGTCTTCTTCACTGTTTGGAAAATTC  850

seq1  CAGTCCTGACTTTGATGTGAAGAGACAACAACATGAAC-TCTGCCTCATG  898
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CAGTCCTGACTTTGATGTGAAGAGACAACAACATGAACTTCTGCCTCATG  900

seq1  GATGTAATTT-GTCAAGTTGCCTCTATTTATTGACTATA-TTTTTTATGG  946
      |||||||||| |||||||||||||||||||||||||||| ||||||||||
seq2  GATGTAATTTGGTCAAGTTGCCTCTATTTATTGACTATATTTTTTTATGG  950

seq1  TGATCTTTATGATGTATCACCTTGGCTAAGCTACAGTCAATGATTATTTA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTTTATGATGTATCACCTTGGCTAAGCTACAGTCAATGATTATTTA  1000

seq1  ATACAACATTAA-TCTAGACATTGTTGCTATAGGGTGTTTCTA-GATGTG  1044
      |||| ||||||| ||||||||||||||||||| |||||||||| ||||||
seq2  ATAC-ACATTAATTCTAGACATTGTTGCTATA-GGTGTTTCTAGGATGTG  1048

seq1  AATAAAGTATACTATCAAATTACTAAGGGGCTTTAACTAAGGGGCTTTAT  1094
      ||| |||||||||||| ||||||||| |||| |||||||  |||||||| 
seq2  AAT-AAGTATACTATC-AATTACTAACGGGC-TTAACTA--GGGCTTTA-  1092

seq1  TGCAGATACTGTGACTGGGCCTGATTTA  1122
      ||||||  ||||||   || ||||||||
seq2  TGCAGAATCTGTGAACTGGACTGATTTA  1120