BAC Information

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BAC

Clone NameB6Ng01-096F08
Chromosome4 (Build37)
Map Location 91,754,285 - 91,755,522
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC664848, LOC100042274, Elavl2, LOC664864, LOC620016, LOC654475, 4930577H14Rik
Downstream geneLOC664886, 1700011H22Rik, LOC68280
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096F08.bB6Ng01-096F08.g
ACCDH907021DH907022
length1,2301,218
definitionDH907021|Mus musculus domesticus DNA, BAC clone: B6Ng01-096F08, 5' end.DH907022|Mus musculus domesticus DNA, BAC clone: B6Ng01-096F08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcccccacctgatagtcaatcagcttatgtgccaaaaaacggg
tcatcgggccctcggtcccagggccctcaaagatatgggaaccggtttgt
caggacccaggaagcagtcagagaggcgacccaggaagacccacaagggt
ggacctgcgtgccgcctccgacttcctattaatgcctcaaatgagtattc
agccggtgccagtggagcctataccatccttgcccccgggaaccatgggc
cttattctcggccggggttcactcaccttgcagggcttagtagtccaccc
tggagttatggattgtcaacattcccctgaaatacaggtcctgtgctcaa
gccctaagggcgttttttctattagtaaaggagataggatagctcagctg
ctgctcctccctgataataccagggagaaatctgcaggacctgagataaa
gaaaatgggctcctcaggaaatgattctgcctatttggttgtatctttga
atgatagacctaagctccgccttaagatcaacggaaaagagtttgaaggc
atccttgataccggagcagataaaagtataatctctacacattggtggcc
caaagcatggcccaccacagagtcatctcattcattacagggcctaggat
atcaatcatgtcccactataagctccgttgccttgacgtgagaatcctct
gaaggacagcaagggaaattcataccttatgtgctcccactcccggttaa
cctctggggaagggatattatgcagcatttgggccttattttgtccaatg
aaaacgccccatcgggagggtattcaactaaagcaaaaaatatcatggca
aagatgggttataaagaaggaaaagggttaggacatcaagaacaggaagg
atagagcctatcttacctaatggaaaccaagacagacagggtctgggttt
ccatagcggccattggggcagcacgcccataccatgaaaacagggaccca
gtgtgggtctcatgcacctatcctctgaaaactagaagctgtgatcactg
tagagacataaactagcatattgagccatctacctcacctgaatactccc
atttttgtaatagaaagtcaggaaagtggaactgctcatgacttgacatt
atagacaatgactattgggccatacaagtcctgtactccgcctacatggc
tgaatatcttatgtagacaagagggtagtc
gaattctctgatgcctttgtgaaaattcaacataaatttttaatttttac
aaagtgcctaaggacagatgaaaagcaattttcaacactggacactaagg
ataagaatggaaataaagaagagcctctagaaaactacgcaggaaaaaga
gaggagggtaattaatgtgtaactaagcacttctaaaaacagaatcataa
gtaggcagtgaaacactcctgcttgtagcagaatagctaagttcagaact
aacccatgtgtctagatgaaagaactaatataatcaattatattcttaca
atggaatattattcaagcctaaaaaaaggaaataacatattatgagtcaa
aattgacaataccatgctaattcaaataaaatctatacggaggagaaaca
attgaatggttctacataatgaagcacttagagtagaccaatttctgatg
gcaggaagaaataaatagacagtgatcattgagtatgaagtttcattttt
gtcagactggaacagttaacagcatgggtgtgtttgacagcagtaactta
tgcaaaaaaattcaaaataccaaacattatcttatcctttgccctaatgt
acatgtaatacatggaaatattttaaataggcaaacattataagaattgg
ctatacgtaaatgcaatttcttagttgtaaactataaattcttaattaag
aaaactccttggtaaaaatgtcaaaaaattgattatgactctatggatca
ctaacaagtattcaaaagcaaaaaacaaaaggagaccatttcaagatcac
aaagtctcaaacaattaaacaagagtgtgccaaaatatataaaacattat
cacacaaaaacttaagccaagggacaaaatggagaaattatgcttataga
taaaaatctggttctgtgaaaatatatattctcctgtaactcagatccaa
tctaatcattcatttgataggagttttatagactagaatattcacaaaag
actttactgacgctttgcttctgcgatactgtagctatcataattcacta
ttgagaaagtatgcattaagaaagagtaaaaaaaatagaaacacttcctg
aaattgttataggaattctgaatgacccacagactagggaacctgtttac
tactttatcttaaaaaaatggaagccatgaactgtactctctatcagtca
agtgctagttaataccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_91754285_91755522
seq2: B6Ng01-096F08.g_68_1285 (reverse)

seq1  TGGGTATATAACTAGCCACTTGACTGATAGAGAGATACAGTCTATGTGTC  50
      ||||||| ||||||| |||||||||||||||||| ||||||  ||| |  
seq2  TGGGTAT-TAACTAG-CACTTGACTGATAGAGAG-TACAGTTCATG-GCT  46

seq1  TTCATCTTTTTTAGATAAGGTAGATTAAAAACAGTTTTCCTAAGTCTGTG  100
      | ||| ||||| |||||| ||||     |||||| || ||| ||||||||
seq2  TCCATTTTTTTAAGATAAAGTAG----TAAACAGGTTCCCT-AGTCTGTG  91

seq1  TGTCATCAAGAATCCCTATTAACATTTTCAGGAAGTTGTTCTATTTTTTT  150
       |||||  ||||| |||| ||||| |||||||||||  ||||||||||||
seq2  GGTCATTCAGAATTCCTA-TAACAATTTCAGGAAGTGTTTCTATTTTTTT  140

seq1  TTTAACTCTTTCTTAATGCATACTTTCTTCAATAGTGAATTTTATGATAG  200
      |   ||||||||||||||||||||||| |||||||||||  |||||||||
seq2  T---ACTCTTTCTTAATGCATACTTTC-TCAATAGTGAA--TTATGATAG  184

seq1  CTTACAGTATTTGGCAG-AGCAAAGCGTTCAGTAAAGTC-TTTGTGAATA  248
      | |||||||  | |||| ||||||||| ||||||||||| ||||||||||
seq2  C-TACAGTA--TCGCAGAAGCAAAGCG-TCAGTAAAGTCTTTTGTGAATA  230

seq1  TTCTAGTCTAT-AGACTCCTATCAAATGAATGATTAGAATTGGATCTTGA  297
      ||||||||||| | ||||||||||||||||||||||| |||||||| |||
seq2  TTCTAGTCTATAAAACTCCTATCAAATGAATGATTAG-ATTGGATC-TGA  278

seq1  GTTACAGGAGAATATATATTTTCACAGAACCAGATTTTTTATCTATAAGC  347
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GTTACAGGAGAATATATATTTTCACAGAACCAGA-TTTTTATCTATAAGC  327

seq1  ATAATTTCTCCATTTTGTCCCTTGGCTTAAGTTTTTGTGTGATAATGTTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTCTCCATTTTGTCCCTTGGCTTAAGTTTTTGTGTGATAATGTTT  377

seq1  TATATATTTTGGCACACTCTTGTTTAATTGTTTGAGACTTTGTGATCTTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATTTTGGCACACTCTTGTTTAATTGTTTGAGACTTTGTGATCTTG  427

seq1  AAATGGTCTCCTTTTGTTTTTTGCTTTTGAATACTTGTTAGTGATCCATA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTCTCCTTTTGTTTTTTGCTTTTGAATACTTGTTAGTGATCCATA  477

seq1  GAGTCATAATCAATTTTTTGACATTTTTACCAAGGAGTTTTCTTAATTAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCATAATCAATTTTTTGACATTTTTACCAAGGAGTTTTCTTAATTAA  527

seq1  GAATTTATAGTTTACAACTAAGAAATTGCATTTACGTATAGCCAATTCTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTATAGTTTACAACTAAGAAATTGCATTTACGTATAGCCAATTCTT  577

seq1  ATAATGTTTGCCTATTTAAAATATTTCCATGTATTACATGTACATTAGGG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTTTGCCTATTTAAAATATTTCCATGTATTACATGTACATTAGGG  627

seq1  CAAAGGATAAGATAATGTTTGGTATTTTGAATTTTTTTGCATAAGTTACT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGATAAGATAATGTTTGGTATTTTGAATTTTTTTGCATAAGTTACT  677

seq1  GCTGTCAAACACACCCATGCTGTTAACTGTTCCAGTCTGACAAAAATGAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCAAACACACCCATGCTGTTAACTGTTCCAGTCTGACAAAAATGAA  727

seq1  ACTTCATACTCAATGATCACTGTCTATTTATTTCTTCCTGCCATCAGAAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCATACTCAATGATCACTGTCTATTTATTTCTTCCTGCCATCAGAAA  777

seq1  TTGGTCTACTCTAAGTGCTTCATTATGTAGAACCATTCAATTGTTTCTCC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCTACTCTAAGTGCTTCATTATGTAGAACCATTCAATTGTTTCTCC  827

seq1  TCCGTATAGATTTTATTTGAATTAGCATGGTATTGTCAATTTTGACTCAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTATAGATTTTATTTGAATTAGCATGGTATTGTCAATTTTGACTCAT  877

seq1  AATATGTTATTTCCTTTTTTTAGGCTTGAATAATATTCCATTGTAAGAAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTTATTTCCTTTTTTTAGGCTTGAATAATATTCCATTGTAAGAAT  927

seq1  ATAATTGATTATATTAGTTCTTTCATCTAGACACATGGGTTAGTTCTGAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTGATTATATTAGTTCTTTCATCTAGACACATGGGTTAGTTCTGAA  977

seq1  CTTAGCTATTCTGCTACAAGCAGGAGTGTTTCACTGCCTACTTATGATTC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCTATTCTGCTACAAGCAGGAGTGTTTCACTGCCTACTTATGATTC  1027

seq1  TGTTTTTAGAAGTGCTTAGTTACACATTAATTACCCTCCTCTCTTTTTCC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTAGAAGTGCTTAGTTACACATTAATTACCCTCCTCTCTTTTTCC  1077

seq1  TGCGTAGTTTTCTAGAGGCTCTTCTTTATTTCCATTCTTATCCTTAGTGT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTAGTTTTCTAGAGGCTCTTCTTTATTTCCATTCTTATCCTTAGTGT  1127

seq1  CCAGTGTTGAAAATTGCTTTTCATCTGTCCTTAGGCACTTTGTAAAAATT  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGTTGAAAATTGCTTTTCATCTGTCCTTAGGCACTTTGTAAAAATT  1177

seq1  AAAAATTTATGTTGAATTTTCACAAAGGCATCAGAGAATTC  1238
      |||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTTATGTTGAATTTTCACAAAGGCATCAGAGAATTC  1218