BAC Information

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BAC

Clone NameB6Ng01-096G01
Chromosome4 (Build37)
Map Location 89,760,249 - 89,761,376
singlet/doubletsinglet
Overlap genenone
Upstream geneMtap, LOC625574, Cdkn2a, Cdkn2b, LOC664785, Dmrta1
Downstream geneZfp352, LOC619842, LOC435792, Ppia-ps4_804.1, LOC664840
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096G01.bB6Ng01-096G01.g
ACCDH907045DH907046
length1,2631,130
definitionDH907045|Mus musculus domesticus DNA, BAC clone: B6Ng01-096G01, 5' end.DH907046|Mus musculus domesticus DNA, BAC clone: B6Ng01-096G01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagttctgtatccaattttaatagggttatttgattct
ctggagtttagtttcttgagttctttgtttatattggatattagctctct
atcagatgtaggattggtaaagatctttttctaatctgttggttgccatt
ttgtcctattgacagtgtcctttgctatacagaagctttgcagttttatg
aggtcccatttgttgattcttgatctcagagcataagccattggtgttct
attcaggaaaaatttccttgtgccatgtgtttaaggctcttccccacatt
tcttctattagttcagtgcatctggttttatgtggaggtccttgatccaa
ctgaagaattccaaatggccaagaagcacctaaagaaatgtttaacatcc
ttagtcatcagggaaatgcaaatcaaaacaaccctgagattccacctcac
accagtcagaatgactaagatcaaaacctcaggtaagagtagatgctggt
gaggatgtggagaaagaagaacactcctccatcattggctggattgcaag
gtagaacaaccactctggaaatcagtctggtggttcctcagaaaattacc
tgaggatttagctttaccactcctgggcatatacccaaaagattttccaa
catatagtaagaacacatgctccactatgttcatagcagccttataatag
gcagaagctgaaaagaacccagatatccttcaacagaggaattgctacag
aaaatgtgatacatttacacaatggagtactactcagctgttaacaatga
actcatgaaattctgaggtaaatggatggaactagaaaatatcatcctga
atgaggtatcctaataacaaaagaacacacatggtatgcattcactgaaa
agtggatattagcccaaatactcagaatacccagatacaattcacagacc
acatgaagcttcaagaaggatggaagtccaaagtgtggatgcttaggtgc
ttcttagaaaggggaagaaatcacctcccctggagcaaatattggagaca
aagcgtagactgaagaaaaaggtcatccaaagaactgttcttacttggga
tccattccataatggcagtacactatccagttcactatgtggggtatgcc
acgaagtatctggctgacggaactacttatctgttttgtggggaatctgg
tcggcctgccaattcagggcgaagccccgatggaacatgtgacatgatat
ctctcacaatgtg
gaattcagagagaataaccaacttaaaaaacaatttgttgcattcatttt
agtgaggcgagcttagggaagaaaacaggtttttctgcagctaaggatag
aaaattatcaggactggcactaagaaatccaagtgagagcctgcagcttc
attacaaataccacctgattgaatcgttttgagaggctgtccgtcttcac
cactcatgtgtgctgtatcttagactgaagtaggagaaaattagcgaact
ttcaaaatgaaaactgatttcataaattacagcccagaaaataacaaaaa
gagctgtcatgccctttagcaacgcttcctttcagctaggcagcatcttt
tgtcttcaacctttgagccttcctattgtcgctattgtactcaaaccaag
gcttttcttcttcagtgcaagtgctagaaaagatacatgatgatttctgt
gctgattagagagactatgcatgtacagataacttttgcaagacaaattg
ttaagatagaggatgtgaaagcctaagacacggggaaaacaagtaacaac
tattaagaatataaagacagatcatcatggtatgaactacacacacaaag
ctcaccaggcccattgccccaaaacgggaaagataattctataaaacagt
gactcaatagctcatcttcggatgtatgagaactatactacctcaacctc
agaaatgtataagtaatgatctcttcaaggcttgtatactaaagaatttt
attcaaagtatttcattgtttattctaaaataatatacatacaaacccat
aaaatacacctataaagggacaacacactcattctgtgtgcatttattca
tgtagtgatcagatattaagtacatctaggctaggtatcataaaagagag
caattaataaatatctccatcttaaaagatatagatgaaatgttatatca
ctaacatgggttgatcatttaaacattctgtaatagagactaaaatagaa
gaaggatggtggaagagcccctcagatattaaaggattttttcttaacag
aaagaatatccactccaaattcattatttctagtataaatattataactg
ttagagttttaaataatgttgaacaataca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_89760249_89761376
seq2: B6Ng01-096G01.g_69_1198 (reverse)

seq1  TGTATTTGTTC-ACATTATTT-AAACTCTTAACAG-TATAATATTTAATA  47
      |||| |||||| ||||||||| |||||| |||||| |||||||||| |||
seq2  TGTA-TTGTTCAACATTATTTAAAACTC-TAACAGTTATAATATTT-ATA  47

seq1  CTTAGAAATAATGAATTTGAAGTGAATA-TCTTTCTGTTAAGAAAAA--T  94
      | ||||||||||||||||| |||| ||| ||||||||||||||||||   
seq2  C-TAGAAATAATGAATTTGGAGTGGATATTCTTTCTGTTAAGAAAAAATC  96

seq1  CTTTATTATCTGA-GTGCTCTTTCACCAT-CTTCTTCTATTTTAGTCTCT  142
      ||||| ||||||| | |||||| |||||| ||||||||||||||||||| 
seq2  CTTTAATATCTGAGGGGCTCTTCCACCATCCTTCTTCTATTTTAGTCTC-  145

seq1  TATTACAGAATGTTTAAATGATCAACCCATGTTAGTGAATATAACATTTC  192
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TATTACAGAATGTTTAAATGATCAACCCATGTTAGTG-ATATAACATTTC  194

seq1  ATCTATATCTTTTAAGATGGAGATATTTATTAATTGCTCTCTTTTATGAT  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATATCTTTTAAGATGGAGATATTTATTAATTGCTCTCTTTTATGAT  244

seq1  ACCTAGCCTAGATGTACTTAATATCTGATCACTACATGAATAAATGCACA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGCCTAGATGTACTTAATATCTGATCACTACATGAATAAATGCACA  294

seq1  CAGAATGAGTGTGTTGTCCCTTTATAGGTGTATTTTATGGGTTTGTATGT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGAGTGTGTTGTCCCTTTATAGGTGTATTTTATGGGTTTGTATGT  344

seq1  ATATTATTTTAGAATAAACAATGAAATACTTTGAATAAAATTCTTTAGTA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATTTTAGAATAAACAATGAAATACTTTGAATAAAATTCTTTAGTA  394

seq1  TACAAGCCTTGAAGAGATCATTACTTATACATTTCTGAGGTTGAGGTAGT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGCCTTGAAGAGATCATTACTTATACATTTCTGAGGTTGAGGTAGT  444

seq1  ATAGTTCTCATACATCCGAAGATGAGCTATTGAGTCACTGTTTTATAGAA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTCTCATACATCCGAAGATGAGCTATTGAGTCACTGTTTTATAGAA  494

seq1  TTATCTTTCCCGTTTTGGGGCAATGGGCCTGGTGAGCTTTGTGTGTGTAG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTTCCCGTTTTGGGGCAATGGGCCTGGTGAGCTTTGTGTGTGTAG  544

seq1  TTCATACCATGATGATCTGTCTTTATATTCTTAATAGTTGTTACTTGTTT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATACCATGATGATCTGTCTTTATATTCTTAATAGTTGTTACTTGTTT  594

seq1  TCCCCGTGTCTTAGGCTTTCACATCCTCTATCTTAACAATTTGTCTTGCA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCGTGTCTTAGGCTTTCACATCCTCTATCTTAACAATTTGTCTTGCA  644

seq1  AAAGTTATCTGTACATGCATAGTCTCTCTAATCAGCACAGAAATCATCAT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTATCTGTACATGCATAGTCTCTCTAATCAGCACAGAAATCATCAT  694

seq1  GTATCTTTTCTAGCACTTGCACTGAAGAAGAAAAGCCTTGGTTTGAGTAC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTTTTCTAGCACTTGCACTGAAGAAGAAAAGCCTTGGTTTGAGTAC  744

seq1  AATAGCGACAATAGGAAGGCTCAAAGGTTGAAGACAAAAGATGCTGCCTA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCGACAATAGGAAGGCTCAAAGGTTGAAGACAAAAGATGCTGCCTA  794

seq1  GCTGAAAGGAAGCGTTGCTAAAGGGCATGACAGCTCTTTTTGTTATTTTC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAAGGAAGCGTTGCTAAAGGGCATGACAGCTCTTTTTGTTATTTTC  844

seq1  TGGGCTGTAATTTATGAAATCAGTTTTCATTTTGAAAGTTCGCTAATTTT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTGTAATTTATGAAATCAGTTTTCATTTTGAAAGTTCGCTAATTTT  894

seq1  CTCCTACTTCAGTCTAAGATACAGCACACATGAGTGGTGAAGACGGACAG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTACTTCAGTCTAAGATACAGCACACATGAGTGGTGAAGACGGACAG  944

seq1  CCTCTCAAAACGATTCAATCAGGTGGTATTTGTAATGAAGCTGCAGGCTC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCAAAACGATTCAATCAGGTGGTATTTGTAATGAAGCTGCAGGCTC  994

seq1  TCACTTGGATTTCTTAGTGCCAGTCCTGATAATTTTCTATCCTTAGCTGC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTGGATTTCTTAGTGCCAGTCCTGATAATTTTCTATCCTTAGCTGC  1044

seq1  AGAAAAACCTGTTTTCTTCCCTAAGCTCGCCTCACTAAAATGAATGCAAC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAACCTGTTTTCTTCCCTAAGCTCGCCTCACTAAAATGAATGCAAC  1094

seq1  AAATTGTTTTTTAAGTTGGTTATTCTCTCTGAATTC  1128
      ||||||||||||||||||||||||||||||||||||
seq2  AAATTGTTTTTTAAGTTGGTTATTCTCTCTGAATTC  1130