BAC Information

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BAC

Clone NameB6Ng01-098F12
Chromosome4 (Build37)
Map Location 16,370,436 - 16,455,508
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040095, LOC633695, Calb1, Decr1, Nbn, Osgin2, Ripk2, LOC667150, LOC383994
Downstream geneLOC100040154, LOC667212, LOC100040173
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098F12.bB6Ng01-098F12.g
ACCDH908464DH908465
length1,0831,126
definitionDH908464|Mus musculus domesticus DNA, BAC clone: B6Ng01-098F12, 5' end.DH908465|Mus musculus domesticus DNA, BAC clone: B6Ng01-098F12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(16,370,436 - 16,371,447)(16,454,385 - 16,455,508)
sequence
gaattcaggtttttaaaagtatgtacttatgattctatggctttcctcag
tatttatttttatcttcctcttttttttcttattttggatatttttaatt
ggtatatattttaatttggatgtttctccctgagttttagttattttgga
taagggtttttctattgagttgattttctcaaagaatcaactctttgttt
tattgattccttttattgttctttttgcttctaactggtggatatcagtc
ctgagtttcactatttccttccatctaccccttttgggtgtgtctagtcc
tttttgttctagagtttttaagtgtgctgttaattttatagtatgagatc
tctccatttttaaaaatatatgtacttagtaccatgaacctgcatctaaa
accccttttattgtgtccataagtttgggtgtgctgtgtgttcattttca
ttgcagtctagacagtgtttaatttcttctattatttctgtcttgatttt
acttttcatttagtagagagttatttggttttcatgagtttataaacttt
ctgttattcttgctactgagatttaatctgtggtgtataataattttgaa
tcagaagtactatatataattatatgctttatattatgaaggcaacaatt
atccattttcttataaaaccaatgtgctgatgagatgaagttttatactg
agctaattgtacaaaagttctttagaaaaacatttaaactttaaaggtta
aagttggaattgtttaatctagcattttttccatttaactaaatgtcata
attgctttttggtgtggtgataaaatattctgacaaaagaaacttaagag
agaaagaatttgctttgtcttatagttcaaggtgtagtccattatgctgg
agacctcaggtagcaggagttaaagcagctggtcacatgatctacaatca
gaaagctgagagccatcaatggtacttctgctcagtgtcttctcactaat
atcattcatattccagccgaaaatcaagtaccacatgatcagacttcctc
acttcaaaacgcatcaggtaattcaccacaagt
gaattcaaatcaaattaaacattaatatttatatttccctttaaatattt
tacattcatgaaatcatccattttatgtggggggaaatgggtcatttaat
tgattttcaccttttctcaatgagtaccaccagcttcaggcaaaattcat
tagagtaacatctctaggaaaatgaaacacaaaacgaatgtacacttaca
ttcaacatttggaaattcaagctctaggctgatggaaatgactcacattt
actgcctctcattaatatccgaggccaaagcaaagaggatgtgtcattct
aaatgagcaaatatttcaactgttgttcacacagatttttagttatcggt
gtaggtagataattcatggcaaaaatcatctattatgtatgaatgtcaga
aatacatcatagtgtataaaaacatacatattaaaattcaaatacaaata
aaagaagacccactattaaaaatacagccaatgaatgtcatattagtatc
atttccaaatgttaagcaagtatttgcttatctgtattcttctctattgt
ctaaggaaaagcttctttcttgttgttgttgtgttgttttgttttatttt
tccagacaggtttatagtactggctgtcctggaactcactctgtagacca
ggctggcctcaaactcagagatccacctgcctctgcttttgtgtgtttat
catatagttataatttattcaatgtagctcaagaaatattactttaattt
attttgttttggatatttaaccaaaagatcgttttcaattttacaacatg
tcaatggtattaaaaatacttgatctagaaaataagtataaaaattagct
agtttcaaccccaagacctataaacattcgctttaccggataaaactgtg
ggcttcagtttttcttttttgagagtgccacccagacactattgcagatg
caaacaagagcttgctgacaggagcctgatatactgtctcctgagtggct
ttgcttagtgccttgacaaataacagtagtgatgctcacagccattacat
tggacagaacccatggttcctcattgaggagctagtgatactcaagagct
gaagggtttgcaagtcccgttagtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_16370436_16371447
seq2: B6Ng01-098F12.b_131_1128

seq1  TGGATATTTTTAATTGGTATATATTTTAATTTGGATGTTTCTCCCTGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATTTTTAATTGGTATATATTTTAATTTGGATGTTTCTCCCTGAGT  50

seq1  TTTAGTTATTTTGGATAAGGGTTTTTCTATTGAGTTGATTTTCTCAAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTATTTTGGATAAGGGTTTTTCTATTGAGTTGATTTTCTCAAAGA  100

seq1  ATCAACTCTTTGTTTTATTGATTCCTTTTATTGTTCTTTTTGCTTCTAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACTCTTTGTTTTATTGATTCCTTTTATTGTTCTTTTTGCTTCTAAC  150

seq1  TGGTGGATATCAGTCCTGAGTTTCACTATTTCCTTCCATCTACCCCTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGATATCAGTCCTGAGTTTCACTATTTCCTTCCATCTACCCCTTTT  200

seq1  GGGTGTGTCTAGTCCTTTTTGTTCTAGAGTTTTTAAGTGTGCTGTTAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTGTCTAGTCCTTTTTGTTCTAGAGTTTTTAAGTGTGCTGTTAATT  250

seq1  TTATAGTATGAGATCTCTCCATTTTTAAAAATATATGTACTTAGTACCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGTATGAGATCTCTCCATTTTTAAAAATATATGTACTTAGTACCAT  300

seq1  GAACCTGCATCTAAAACCCCTTTTATTGTGTCCATAAGTTTGGGTGTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTGCATCTAAAACCCCTTTTATTGTGTCCATAAGTTTGGGTGTGCT  350

seq1  GTGTGTTCATTTTCATTGCAGTCTAGACAGTGTTTAATTTCTTCTATTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTCATTTTCATTGCAGTCTAGACAGTGTTTAATTTCTTCTATTAT  400

seq1  TTCTGTCTTGATTTTACTTTTCATTTAGTAGAGAGTTATTTGGTTTTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCTTGATTTTACTTTTCATTTAGTAGAGAGTTATTTGGTTTTCAT  450

seq1  GAGTTTATAAACTTTCTGTTATTCTTGCTACTGAGATTTAATCTGTGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTATAAACTTTCTGTTATTCTTGCTACTGAGATTTAATCTGTGGTG  500

seq1  TATAATAATTTTGAATCAGAAGTACTATATATAATTATATGCTTTATATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATAATTTTGAATCAGAAGTACTATATATAATTATATGCTTTATATT  550

seq1  ATGAAGGCAACAATTATCCATTTTCTTATAAAACCAATGTGCTGATGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGGCAACAATTATCCATTTTCTTATAAAACCAATGTGCTGATGAGA  600

seq1  TGAAGTTTTATACTGAGCTAATTGTACAAAAGTTCTTTAGAAAAACATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTTTTATACTGAGCTAATTGTACAAAAGTTCTTTAGAAAAACATTT  650

seq1  AAACTTTAAAGGTTAAAGTTGGAATTGTTTAATCTAGCATTTTTTCCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTAAAGGTTAAAGTTGGAATTGTTTAATCTAGCATTTTTTCCATT  700

seq1  TAACTAAATGTCATAATTGCTTTTTGGTGTGGTGATAAAATATTCTGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAAATGTCATAATTGCTTTTTGGTGTGGTGATAAAATATTCTGACA  750

seq1  AAAGAAACTTAAGAGAGAAAGAATTTGCTTTGTCTTATAGTTCAAGGTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAAGAAACTTAAGAGAGAAAGAATTTGCTTTGTCTTATAGTTCAAGG-TG  799

seq1  TAGTCCATTATGCTGGAGACCTCAGGGTAGCAGGAGTTTAAAGCAGCTGG  850
      |||||||||||||||||||||||| ||||||||||| |||||||||||||
seq2  TAGTCCATTATGCTGGAGACCTCA-GGTAGCAGGAG-TTAAAGCAGCTGG  847

seq1  TCACATGATCTACAATCAGAAAGCTGAGAGCCATCAATGGTACTTCTGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGATCTACAATCAGAAAGCTGAGAGCCATCAATGGTACTTCTGCT  897

seq1  CAGTGTTCTTTCTCCACTAATATCATTCATAATTCCAGCCGGAGAATCAA  950
      ||||||   |||| |||||||||||||||| ||||||||| || ||||||
seq2  CAGTGT--CTTCT-CACTAATATCATTCAT-ATTCCAGCC-GAAAATCAA  942

seq1  GTACTCACAGTGAATCAGACTT-CTCACTTCAAAAAACAGCATCAAGTTA  999
      |||| |||| || ||||||||| ||||||||||||    ||||| || ||
seq2  GTAC-CACA-TG-ATCAGACTTCCTCACTTCAAAA---CGCATC-AGGTA  985

seq1  ATTCACCACAAGT  1012
      |||||||||||||
seq2  ATTCACCACAAGT  998

seq1: chr4_16454385_16455508
seq2: B6Ng01-098F12.g_68_1193 (reverse)

seq1  CTACT-ACGGGAC-TGCAAACCCTTCAGCTTCTTGAGTATTTCACTAGCT  48
      ||||| ||||||| ||||||||||||||| |||||||||  |||||||||
seq2  CTACTAACGGGACTTGCAAACCCTTCAGC-TCTTGAGTA--TCACTAGCT  47

seq1  CCTTCATTGGGGACCCTGTGTTCTGTCCAATGT-ATGGCTGTGAGCATCC  97
      |||  ||  || ||| || |||||||||||||| |||||||||||||| |
seq2  CCTCAATGAGGAACCATGGGTTCTGTCCAATGTAATGGCTGTGAGCAT-C  96

seq1  ACTACTG-TATTTGTC-AGGCACT-AGCAAAGCCACTCAGGAGACAGTTA  144
      ||||||| |||||||| ||||||| |||||||||||||||||||||| ||
seq2  ACTACTGTTATTTGTCAAGGCACTAAGCAAAGCCACTCAGGAGACAG-TA  145

seq1  TATCAGGCTCCTGTCAGCAAGCTCTTGTTTGCATCTGCAATAGTGTCTGG  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGGCTCCTGTCAGCAAGCTCTTGTTTGCATCTGCAATAGTGTCTGG  195

seq1  GTGGCACTCTC-ACAAAGAAAAACTGAAGCCCACAGTTTTATCCGGTAAA  243
      ||||||||||| | ||||||||||||||||||||||||||||||||||||
seq2  GTGGCACTCTCAAAAAAGAAAAACTGAAGCCCACAGTTTTATCCGGTAAA  245

seq1  GCGAATGTTTATAGGTCTTGGGGTTGAAACTAGCTAATTTTTATACTTAT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAATGTTTATAGGTCTTGGGGTTGAAACTAGCTAATTTTTATACTTAT  295

seq1  TTTCTAGATCAAGTATTTTTAATACCATTGACATGTTGTAAAATTGAAAA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGATCAAGTATTTTTAATACCATTGACATGTTGTAAAATTGAAAA  345

seq1  CGATCTTTTGGTTAAATATCCAAAACAAAATAAATTAAAGTAATATTTCT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATCTTTTGGTTAAATATCCAAAACAAAATAAATTAAAGTAATATTTCT  395

seq1  TGAGCTACATTGAATAAATTATAACTATATGATAAACACACAAAAGCAGA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTACATTGAATAAATTATAACTATATGATAAACACACAAAAGCAGA  445

seq1  GGCAGGTGGATCTCTGAGTTTGAGGCCAGCCTGGTCTACAGAGTGAGTTC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGTGGATCTCTGAGTTTGAGGCCAGCCTGGTCTACAGAGTGAGTTC  495

seq1  CAGGACAGCCAGTACTATAAACCTGTCTGGAAAAATAAAACAAAACAACA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAGCCAGTACTATAAACCTGTCTGGAAAAATAAAACAAAACAACA  545

seq1  CAACAACAACAAGAAAGAAGCTTTTCCTTAGACAATAGAGAAGAATACAG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACAACAAGAAAGAAGCTTTTCCTTAGACAATAGAGAAGAATACAG  595

seq1  ATAAGCAAATACTTGCTTAACATTTGGAAATGATACTAATATGACATTCA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCAAATACTTGCTTAACATTTGGAAATGATACTAATATGACATTCA  645

seq1  TTGGCTGTATTTTTAATAGTGGGTCTTCTTTTATTTGTATTTGAATTTTA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTGTATTTTTAATAGTGGGTCTTCTTTTATTTGTATTTGAATTTTA  695

seq1  ATATGTATGTTTTTATACACTATGATGTATTTCTGACATTCATACATAAT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTATGTTTTTATACACTATGATGTATTTCTGACATTCATACATAAT  745

seq1  AGATGATTTTTGCCATGAATTATCTACCTACACCGATAACTAAAAATCTG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGATTTTTGCCATGAATTATCTACCTACACCGATAACTAAAAATCTG  795

seq1  TGTGAACAACAGTTGAAATATTTGCTCATTTAGAATGACACATCCTCTTT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAACAACAGTTGAAATATTTGCTCATTTAGAATGACACATCCTCTTT  845

seq1  GCTTTGGCCTCGGATATTAATGAGAGGCAGTAAATGTGAGTCATTTCCAT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGGCCTCGGATATTAATGAGAGGCAGTAAATGTGAGTCATTTCCAT  895

seq1  CAGCCTAGAGCTTGAATTTCCAAATGTTGAATGTAAGTGTACATTCGTTT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTAGAGCTTGAATTTCCAAATGTTGAATGTAAGTGTACATTCGTTT  945

seq1  TGTGTTTCATTTTCCTAGAGATGTTACTCTAATGAATTTTGCCTGAAGCT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTCATTTTCCTAGAGATGTTACTCTAATGAATTTTGCCTGAAGCT  995

seq1  GGTGGTACTCATTGAGAAAAGGTGAAAATCAATTAAATGACCCATTTCCC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTACTCATTGAGAAAAGGTGAAAATCAATTAAATGACCCATTTCCC  1045

seq1  CCCACATAAAATGGATGATTTCATGAATGTAAAATATTTAAAGGGAAATA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACATAAAATGGATGATTTCATGAATGTAAAATATTTAAAGGGAAATA  1095

seq1  TAAATATTAATGTTTAATTTGATTTGAATTC  1124
      |||||||||||||||||||||||||||||||
seq2  TAAATATTAATGTTTAATTTGATTTGAATTC  1126