BAC Information

Click to search

BAC

Clone NameB6Ng01-098I07
Chromosome4 (Build37)
Map Location 61,865,287 - 61,972,299
singlet/doubletdoublet
Overlap geneZfp37, Slc31a2, Fkbp15
Upstream geneLOC100039089, LOC667239, LOC100039116, LOC667242, LOC100039150, LOC100039019, LOC100039177, LOC621093, LOC100039206, LOC621127, LOC100039228, LOC384021, LOC100039247, LOC667278, Mup5, LOC435785, LOC667295, LOC100039305, LOC546832, OTTMUSG00000007485, Mup3, LOC100039345, OTTMUSG00000000231
Downstream geneSlc31a1, Cdc26, Prpf4, Rnf183, Wdr31, Bspry, Hdhd3, Alad, Pole3, 4933430I17Rik, Rgs3, Zfp618, Ambp, Kif12, Col27a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098I07.bB6Ng01-098I07.g
ACCDH908587DH908588
length2321,118
definitionDH908587|Mus musculus domesticus DNA, BAC clone: B6Ng01-098I07, 5' end.DH908588|Mus musculus domesticus DNA, BAC clone: B6Ng01-098I07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,972,068 - 61,972,299)(61,865,287 - 61,866,426)
sequence
aaggccagcctcctccacataatgagctccaggtcagccaacattacata
gtcaaactttgtctctaaaaagaaaaagaaaaacaacaacaacaaaaaaa
tccctcattcctattattttgtgtatgggtgtgtgtgtgtgtgtgtatat
atgtgtatatatatatatatatatatatatatgcacacacacacacacaa
atacagtgtgtcagatattttggagttaaagt
gaattccttttctcctgagagattctggttgttttgttttgttttttgtt
ttttttgtttttgtttttgttttttctactagttcctggttaaaaaaaga
aaacctaggacttttaagaaaaaaaattttttttccatattgggaattaa
atctaggtccttgtgagaaatcactctattctgagctgtattcccagctc
taataaaagtttacaaattactctttgaagaattccaaacttaccgccaa
gaaacgaaaaacttacttgcacttgttcctgctgtcttgggccttgctat
ttttttcagactacttgggctggcttttttcccctttcccgatgatggct
cttcttcttccaacacggagactatgtcttgtttgggatcttgatttcct
actcataagaaatgagacactgagtgttggaccaaacatctcagaaatca
agccctgatgatgtctgtacttcagggtctttcaaggctaataaacatat
atggtttctaatatttcacaataaggatgcccatgtacctcaactgagta
aaccttcccttttggatgcaatggcacaagcatcattcctggtactgaaa
agggattaaaactccctgaccaaccaccatcactatcactacaatcacca
ccaccaccaccaccactactaccaaaataaaataaaattaaacaaaacaa
gaaaacatcaaggacttgagaaagaagggattgcagtgaacatgttctgg
gtggtggggaactatccttacccagggaggctggattgctgcagttctct
agcttcgtatccttgtacacatctctctgcacaggttccagctgctccca
ttccttctaagtaaaagccacagataaatctatgatgttactgattccta
tcatattctagattcctatatatgcctacatattcctatcatattctcag
tctggcacttctcaatctccacattctgatttcttctcacctcactattc
actattgccacatacactttaaacatgccctctcaacatgtaaacaacct
ccagaccacatggtgacttggatctgtcactatctcacctcagacttcag
tcaactcttaaaaacccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_61972068_61972299
seq2: B6Ng01-098I07.b_53_284 (reverse)

seq1  ACTTTAACTCCAAAATATCTGACACACTCTTTTGGTTTCCTGAG-GCACC  49
      |||||||||||||||||||||||||||| | || || |  || | |    
seq2  ACTTTAACTCCAAAATATCTGACACACTGTATTTGTGT-GTGTGTGTGTG  49

seq1  CATATATATATATATATATATATATATACACATATATACACACACACACA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATATATATATATATATATATATACACATATATACACACACACACA  99

seq1  CACACCCATACACAAAATAATAGGAATGAGGGATTTTTTTGTTGTTGTTG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCCATACACAAAATAATAGGAATGAGGGATTTTTTTGTTGTTGTTG  149

seq1  TTTTTCTTTTTCTTTTTAGAGACAAAGTTTGACTATGTAATGTTGGCTGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTTTTCTTTTTAGAGACAAAGTTTGACTATGTAATGTTGGCTGA  199

seq1  CCTGGAGCTCATTATGTGGAGGAGGCTGGCCTT  232
      |||||||||||||||||||||||||||||||||
seq2  CCTGGAGCTCATTATGTGGAGGAGGCTGGCCTT  232

seq1: chr4_61865287_61866426
seq2: B6Ng01-098I07.g_67_1184

seq1  GAATTCCTTTTCTCCTGAGAGATTCTGGTTGTTTTGTTTTGTTTTTTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTTCTCCTGAGAGATTCTGGTTGTTTTGTTTTGTTTTTTGTT  50

seq1  TTTTTTGTTTTTGTTTTTGTTTTTTCTACTAGTTCCTGGTTAAAAAAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTTTTTGTTTTTGTTTTTTCTACTAGTTCCTGGTTAAAAAAAGA  100

seq1  AAACCTAGGACTTTTAAGAAAAAAAATTTTTTTTCCATATTGGGAATTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTAGGACTTTTAAGAAAAAAAATTTTTTTTCCATATTGGGAATTAA  150

seq1  ATCTAGGTCCTTGTGAGAAATCACTCTATTCTGAGCTGTATTCCCAGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGGTCCTTGTGAGAAATCACTCTATTCTGAGCTGTATTCCCAGCTC  200

seq1  TAATAAAAGTTTACAAATTACTCTTTGAAGAATTCCAAACTTACCGCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAAGTTTACAAATTACTCTTTGAAGAATTCCAAACTTACCGCCAA  250

seq1  GAAACGAAAAACTTACTTGCACTTGTTCCTGCTGTCTTGGGCCTTGCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACGAAAAACTTACTTGCACTTGTTCCTGCTGTCTTGGGCCTTGCTAT  300

seq1  TTTTTTCAGACTACTTGGGCTGGCTTTTTTCCCCTTTCCCGATGATGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCAGACTACTTGGGCTGGCTTTTTTCCCCTTTCCCGATGATGGCT  350

seq1  CTTCTTCTTCCAACACGGAGACTATGTCTTGTTTGGGATCTTGATTTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCTTCCAACACGGAGACTATGTCTTGTTTGGGATCTTGATTTCCT  400

seq1  ACTCATAAGAAATGAGACACTGAGTGTTGGACCAAACATCTCAGAAATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATAAGAAATGAGACACTGAGTGTTGGACCAAACATCTCAGAAATCA  450

seq1  AGCCCTGATGATGTCTGTACTTCAGGGTCTTTCAAGGCTAATAAACATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTGATGATGTCTGTACTTCAGGGTCTTTCAAGGCTAATAAACATAT  500

seq1  ATGGTTTCTAATATTTCACAATAAGGATGCCCATGTACCTCAACTGAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTCTAATATTTCACAATAAGGATGCCCATGTACCTCAACTGAGTA  550

seq1  AACCTTCCCTTTTGGATGCAATGGCACAAGCATCATTCCTGGTACTGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTCCCTTTTGGATGCAATGGCACAAGCATCATTCCTGGTACTGAAA  600

seq1  AGGGATTAAAACTCCCTGACCAACCACCATCACTATCACTACAATCACCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATTAAAACTCCCTGACCAACCACCATCACTATCACTACAATCACCA  650

seq1  CCACCACCACCACCACTACTACCAAAATAAAATAAAATTAAACAAAACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACCACCACCACTACTACCAAAATAAAATAAAATTAAACAAAACAA  700

seq1  GAAAACATCAAGGACTTGAGAAAGAAGGGATTGCAGTGAACATGTTCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACATCAAGGACTTGAGAAAGAAGGGATTGCAGTGAACATGTTCTGG  750

seq1  GTGGTGGGGAACTATCCTTACCCATGGAGGCTGGATTGCTGCAGTTCTCT  800
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GTGGTGGGGAACTATCCTTACCCAGGGAGGCTGGATTGCTGCAGTTCTCT  800

seq1  AGCTTCGTATCCTTGTACACATCTCTCTGCACAGGTTCCAGCTGCTCCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCGTATCCTTGTACACATCTCTCTGCACAGGTTCCAGCTGCTCCCA  850

seq1  TTCCTTCTAAGTAAAAGCCACAGATAAATCTATGAATGTTACTGATTCCT  900
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTCCTTCTAAGTAAAAGCCACAGATAAATCTATG-ATGTTACTGATTCCT  899

seq1  ATCATATTCTAGATTCCTATTATATGCCTACATATTCCTATCATATTCTC  950
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATCATATTCTAGATTCCTA-TATATGCCTACATATTCCTATCATATTCTC  948

seq1  AGTCTGGCACTTCTCAAATCTCCACATTCCTGAGTTTCTTCTCACCTCAA  1000
      ||||||||||||||| |||||||||||| |||| |||||||||||||| |
seq2  AGTCTGGCACTTCTC-AATCTCCACATT-CTGA-TTTCTTCTCACCTC-A  994

seq1  CTATTCACTATTGCCCACAATACACATTTAAACATGCCCTCTCAACATGT  1050
      ||||||||||||| |||| |||||| ||||||||||||||||||||||||
seq2  CTATTCACTATTG-CCAC-ATACAC-TTTAAACATGCCCTCTCAACATGT  1041

seq1  AAAAGCAACCCTCACAGACCAGCAATGTGTGACTTGGATCTGTCACTAAT  1100
      |||  ||| |||| |||||||   ||| ||||||||||||||||||| ||
seq2  AAA--CAA-CCTC-CAGACCA--CATG-GTGACTTGGATCTGTCACT-AT  1083

seq1  CTCCACCTCACAGACTTCCAGTCTAACTCTTAATAACCCC  1140
      || |||||  ||||||| ||||| ||||||||| ||||||
seq2  CT-CACCT--CAGACTT-CAGTC-AACTCTTAAAAACCCC  1118