BAC Information

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BAC

Clone NameB6Ng01-098J19
Chromosome4 (Build37)
Map Location 73,816,723 - 73,817,414
singlet/doubletsinglet
Overlap geneFrmd3
Upstream geneOTTMUSG00000001246, LOC100039726, LOC667722, LOC623115, OTTMUSG00000000281, OTTMUSG00000000280, OTTMUSG00000000282, OTTMUSG00000000283, Gm428, Rasef, LOC667768, LOC545637, LOC623272, OTTMUSG00000014862, OTTMUSG00000004010, 2310002L09Rik
Downstream geneLOC100039774, Jmjd2c, LOC100040258, LOC100039814, LOC636847
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098J19.bB6Ng01-098J19.g
ACCDH908652DH908653
length1,235692
definitionDH908652|Mus musculus domesticus DNA, BAC clone: B6Ng01-098J19, 5' end.DH908653|Mus musculus domesticus DNA, BAC clone: B6Ng01-098J19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaatggcatcacagatccaatgtatttaacaaacatctatgaaac
atggcaatcaaacactccagaaaaacatcctctcaagatcctgtggaatt
ttctttaaaatagatcatacaatagaatacaagcaagtctcaacaaataa
gaaaaaaattaaaataatttcttatattctgaatataatggaatatagct
agaaatcaattccaagaaaaaacacagaaaattcacaaagtcatggatag
taaacatcacattactcagtaatgaaatggagccactaagaaaatcaaga
aaactaaaaacaaacaacaatatacctagaattagatgaaagtgaagaac
ataccaaaatatctctaaatacgtgcatcattccctagacattataaaaa
tgtaaaacaatactactttaagacttcattttaggaggctggagagatgg
ctcagcggttaagaacactaactgctcttccagaggtcctgagttcaatt
tccagcaaccacatagtggctcacaaccatctgtaataagatctgatgcc
ctcttctggtgtgtctgagagagctacagtgtactcacataaataaatta
aattaaaataaataaataaataaataaataaataagacttcattgtagac
cattcagaatggcaatgatcagtggaacaacagacaacaaatgttaaaga
gtgaggaagagggaccccattcactacgggtggaattgcaaactggtatt
gtctctatggaaattgttattaaaaaaaattctccaaaaagctcaaaatc
ttactatatggcccacatattagcttacatccaaaggactcaacatcata
ctgcacagatacttgttcagccatgttcaaaggcgaatgttatgttttat
aacacctaggacgaggaaacagcctaagtgttctataaatataaatagat
aatgaaaatgtgtttcctataccctatgggatactatttagcagcaagaa
aaacagaatcataaaaactgcagccaatggatagaactagaaagattcat
attgaggagaatccagacctaagaacaaatgtggtatgtgttctctctta
ctgaggttttcagcccaatcttctatgtgagttccatacccctagtacct
cgaacccaggaagttaatggtaccttcagatctgtatctgaggacattga
gaggtaatagaccatctagaaatcctggctaggga
gaattcaaaatatttctaaaattatttatgaaaaatgtaatggtagcagt
tggaaaagggactgaaagagctaaggcggtttgcagccacataggggaag
caatggtttcaaccggccagaccccccagaactcttggcaactggaccac
caaccaaagaatacacatagagggacccatggctccagccacatatgtgg
cagagaatggctttgttgggcatcagtgagaggagcagcccttgggcctg
agagtatttgattccccagtgtaagggaatgccatattgtgaagatgtgg
gtggggagcattctcatagaggcgagggagggggataagatagggggttt
ctgaaggggaaacctggaaaggggaaaacatttgaaatgcaaataaataa
aatatccaataaaaaagaaaagaaaaagaaaaaagaaaaatgtaacggta
caacacatgtacagttaagcaaggcaattgcttttagtgactattgaaac
tcagttataattcattaaaattagaacccgaactcccaataatgatagct
agattctagtactcagtagccatcagtggctggtggtcactatatccatc
tgaaactaagaacattcttcattgcagaacgttctgatggaaagaatggt
ttttgtactacttaaaattgaattgatgattatgaacaatcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_73816723_73817414
seq2: B6Ng01-098J19.g_66_757

seq1  GAATTCAAAATATTTCTAAAATTATTTATGAAAAATGTAATGGTAGCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATATTTCTAAAATTATTTATGAAAAATGTAATGGTAGCAGT  50

seq1  TGGAAAAGGGACTGAAAGAGCTAAGGCGGTTTGCAGCCACATAGGGGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAGGGACTGAAAGAGCTAAGGCGGTTTGCAGCCACATAGGGGAAG  100

seq1  CAATGGTTTCAACCGGCCAGACCCCCCAGAACTCTTGGCAACTGGACCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGTTTCAACCGGCCAGACCCCCCAGAACTCTTGGCAACTGGACCAC  150

seq1  CAACCAAAGAATACACATAGAGGGACCCATGGCTCCAGCCACATATGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAAAGAATACACATAGAGGGACCCATGGCTCCAGCCACATATGTGG  200

seq1  CAGAGAATGGCTTTGTTGGGCATCAGTGAGAGGAGCAGCCCTTGGGCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAATGGCTTTGTTGGGCATCAGTGAGAGGAGCAGCCCTTGGGCCTG  250

seq1  AGAGTATTTGATTCCCCAGTGTAAGGGAATGCCATATTGTGAAGATGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTATTTGATTCCCCAGTGTAAGGGAATGCCATATTGTGAAGATGTGG  300

seq1  GTGGGGAGCATTCTCATAGAGGCGAGGGAGGGGGATAAGATAGGGGGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGAGCATTCTCATAGAGGCGAGGGAGGGGGATAAGATAGGGGGTTT  350

seq1  CTGAAGGGGAAACCTGGAAAGGGGAAAACATTTGAAATGCAAATAAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGGGAAACCTGGAAAGGGGAAAACATTTGAAATGCAAATAAATAA  400

seq1  AATATCCAATAAAAAAGAAAAGAAAAAGAAAAAAGAAAAATGTAACGGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCCAATAAAAAAGAAAAGAAAAAGAAAAAAGAAAAATGTAACGGTA  450

seq1  CAACACATGTACAGTTAAGCAAGGCAATTGCTTTTAGTGACTATTGAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACATGTACAGTTAAGCAAGGCAATTGCTTTTAGTGACTATTGAAAC  500

seq1  TCAGTTATAATTCATTAAAATTAGAACCCGAACTCCCAATAATGATAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTATAATTCATTAAAATTAGAACCCGAACTCCCAATAATGATAGCT  550

seq1  AGATTCTAGTACTCAGTAGCCATCAGTGGCTGGTGGTCACTATATCCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCTAGTACTCAGTAGCCATCAGTGGCTGGTGGTCACTATATCCATC  600

seq1  TGAAACTAAGAACATTCTTCATTGCAGAACGTCCTGATGGAAAGAATGGT  650
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGAAACTAAGAACATTCTTCATTGCAGAACGTTCTGATGGAAAGAATGGT  650

seq1  TTTTGTACTACTTAAAATTGAATTGATGATTATGAACAATCC  692
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTACTACTTAAAATTGAATTGATGATTATGAACAATCC  692