BAC Information

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BAC

Clone NameB6Ng01-098N11
Chromosome4 (Build37)
Map Location 10,200,038 - 10,200,821
singlet/doubletsinglet
Overlap genenone
Upstream gene4933402J24Rik, Asph, Gdf6, 4930448K20Rik
Downstream geneLOC666840, 1700123O12Rik, LOC383991, LOC100039656, LOC545589, 2610301B20Rik, LOC383992, LOC100039746, Plekhf2, 2310030N02Rik, LOC546828, LOC666897, Trp53inp1, Ccne2, Ints8, Dpy19l4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098N11.bB6Ng01-098N11.g
ACCDH908807DH908808
length9421,286
definitionDH908807|Mus musculus domesticus DNA, BAC clone: B6Ng01-098N11, 5' end.DH908808|Mus musculus domesticus DNA, BAC clone: B6Ng01-098N11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatacttttagagtctacatattagtagaactacacaatatttg
cccttatgtctgatttatttcacttagtaatgaatcttacaaggttcacc
gacattgttgctaatagcataattgtttctttgagaagaatagcattata
ttgtatatgtgaatcatattttaagcccattgatctatagataggcagct
agattgctccatatttgagttagtacagataatgttgcaatgactgtgat
gattcagtttactgaggtattgacttgtttaacttctttcttccttcctt
ccttccttccttccttccttccttcctttctttctttctttctttctttc
tttgttttaattaggtatttaattcatttgcatttccaatgctatcccaa
aagtccccacaagctccccccgcccacccactcccacttcttggccctgg
cgttcccctgtactgaggcatataaagtttgcacgaccaatgggcctctc
tttccactgatggccaactaggccatcttctgatacatatgcagctggag
atacaagctccgaggggtactggttagttcatattgttgttccacctgta
gggttgcagatctcctcagctccttgggtactttctctacctcctccatt
gggggccctgtgatccatccaatagctgactgtgagcatccacttctgtg
tttgctaggcccctgcatagtctcacaagcaacagcaatatcagggtcct
ttcagcaaaatcttgctagtgtatgcaatggtgtcagcgtttggaggctg
attatgggatggatccccgggtattgccgtctctagattgtccatccttt
catctcagctccaaactttgtctctgtactacttccatgggtgctttgtt
cccaattctaagaagggcaaagtgtccacactttggtcttcg
gaattccacataaaaccagagacactgaaacttatagaggagaaagtagg
gaaaatccttgaagatatgggtacaggggaaaaattcctgaatagaacag
caatggcttgtgctgtaagatcaagaatcgataaatgggacctcataaaa
ttgcaaagcttctgcaaagcaaaagacaccatcaataagacaaaaagtcc
accaacagattgggaaaggatctttacctatcccaaatcggataggggac
taatatccaatatatataaagaactcaagaaggtggactccagaaaatca
aataaccccattaaaaatggggctcagagctgaacaaagaattctcacct
gagaaataccgaatggcagagaagcacctgaaaaaatgttcaacatcctt
aatcatcagggaaatgtaaatcaaaacaacactgagattccacttcactc
cagtcagaatggctaagatcaaaaactcaggtgacagcagatgctggcga
ggatgtggagaaagaggaacactcctccattgttagtgggattgcaagct
tgtacaaccactctggaaatcagtctggcggttcctcagaaaattggaca
tagtactacgggaggatccagcaatacctctcctgggcatatatccagaa
gatgtcccaaccggtaagaagaacacatgctccactatcttcatagcagc
cttatttataatagccagaagctggaaagaacccagatgcccctcaacag
aggaatggatacagaaaatgtggtacatttacacaatggaatactactca
gctatttaaaaaatgaatttatgaaattcctagcccaatggatggacctg
gagggtatcatcctgagtgaagtacccatcacaaaggaactcgcacaata
tgtactcactgataagtggatattagcccagaaacttaggatacccaaga
atataagaatacaacttgccaaacgcatgaaattcaagaagaacgaggac
caaagtggggacactctactctttcttagaaatggggacaaacacccata
gaggaggtacagaagacaaaatttgaaccgtggacagaaaagatggaacc
tttccatatggattgtcaattgtagggaatcattcccatatatcagcctt
ccaaatgctgaactcaattcgcatacctgaaaagaattgcgtaaggaacc
agaatatagcctctctcttggaacatcatgccggagctcgatcacatacc
gaagaatgatgtgagacagtatgctatgctatccga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_10200038_10200821
seq2: B6Ng01-098N11.b_49_832

seq1  GAATTCAATACTTTTAGAGTCTACATATTAGTAGAACTACACAATATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATACTTTTAGAGTCTACATATTAGTAGAACTACACAATATTTG  50

seq1  CCCTTATGTCTGATTTATTTCACTTAGTAATGAATCTTACAAGGTTCACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTATGTCTGATTTATTTCACTTAGTAATGAATCTTACAAGGTTCACC  100

seq1  GACATTGTTGCTAATAGCATAATTGTTTCTTTGAGAAGAATAGCATTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTGTTGCTAATAGCATAATTGTTTCTTTGAGAAGAATAGCATTATA  150

seq1  TTGTATATGTGAATCATATTTTAAGCCCATTGATCTATAGATAGGCAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATATGTGAATCATATTTTAAGCCCATTGATCTATAGATAGGCAGCT  200

seq1  AGATTGCTCCATATTTGAGTTAGTACAGATAATGTTGCAATGACTGTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGCTCCATATTTGAGTTAGTACAGATAATGTTGCAATGACTGTGAT  250

seq1  GATTCAGTTTACTGAGGTATTGACTTGTTTAACTTCTTTCTTCCTTCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAGTTTACTGAGGTATTGACTTGTTTAACTTCTTTCTTCCTTCCTT  300

seq1  CCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTC  350

seq1  TTTGTTTTAATTAGGTATTTAATTCATTTGCATTTCCAATGCTATCCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTAATTAGGTATTTAATTCATTTGCATTTCCAATGCTATCCCAA  400

seq1  AAGTCCCCACAAGCTCCCCCCGCCCACCCACTCCCACTTCTTGGCCCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCCCACAAGCTCCCCCCGCCCACCCACTCCCACTTCTTGGCCCTGG  450

seq1  CGTTCCCCTGTACTGAGGCATATAAAGTTTGCACGACCAATGGGCCTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCCCCTGTACTGAGGCATATAAAGTTTGCACGACCAATGGGCCTCTC  500

seq1  TTTCCACTGATGGCCAACTAGGCCATCTTCTGATACATATGCAGCTGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCACTGATGGCCAACTAGGCCATCTTCTGATACATATGCAGCTGGAG  550

seq1  ATACAAGCTCCGAGGGGTACTGGTTAGTTCATATTGTTGTTCCACCTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAGCTCCGAGGGGTACTGGTTAGTTCATATTGTTGTTCCACCTGTA  600

seq1  GGGTTGCAGATCTCCTCAGCTCCTTGGGTACTTTCTCTACCTCCTCCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGCAGATCTCCTCAGCTCCTTGGGTACTTTCTCTACCTCCTCCATT  650

seq1  GGGGGCCCTGTGATCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGCCCTGTGATCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTG  700

seq1  TTTGCTAGGCCCCTGCATAGTCTCACAAGCAACAGCAATATCAGGGTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTAGGCCCCTGCATAGTCTCACAAGCAACAGCAATATCAGGGTCCT  750

seq1  TTCAGCAAAATCTTGCTAGTGTATGCAATGGTGT  784
      ||||||||||||||||||||||||||||||||||
seq2  TTCAGCAAAATCTTGCTAGTGTATGCAATGGTGT  784