BAC Information

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BAC

Clone NameB6Ng01-098O23
Chromosome4 (Build37)
Map Location 65,041,633 - 65,211,495
singlet/doubletdoublet
Overlap geneAstn2
Upstream genePappa
Downstream geneTrim32
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098O23.bB6Ng01-098O23.g
ACCDH908871DH908872
length1,103331
definitionDH908871|Mus musculus domesticus DNA, BAC clone: B6Ng01-098O23, 5' end.DH908872|Mus musculus domesticus DNA, BAC clone: B6Ng01-098O23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,210,387 - 65,211,495)(65,041,633 - 65,041,963)
sequence
gaattcataatagtataggctttggaagtatagaaaatggaatttaattc
ataggcttaatggtattctgtgtgcattgtcctaaacatcttaataaaat
gcaggttgtttacgtagagtttagaattcctcaggcactatcataatctt
agagctggaaagtctcctttctttgtcttctcacaatctcctatgtatat
gacttcacaacatttgaaccatagtaattataattgtttgtgtgttatct
ttaccattaaactatagtccttcaaaattaaccactgggccttgttcacc
ctttcttaattttggtcagtaagtaatatttattgaacttaatttaactg
tcaataatgtatcattgtcctctacattttgcacacagggaaactgaggt
ttaacaagaggatccatttatgcaagttcaaataagaaagaaacaatagt
gttaggaataaatcctagtttattttgattgcttaacatttctgtgactg
cttttctcctcctgctcaacttggtttactaactgattagcttgaacttg
gaaacatttatgagttctggaattgcagaccttttttgttatgaaatgca
atgaccatgctaatgttgatcccatcaaatgctaggagtcagagtgcttg
cagtatatactttcatttgtttctaagaacacacacacagagagagagaa
acatgtgtgcatatgaacaggtagtgcaggcatactcacacaaacattca
tacacttataaatatatgatcaaaaacagagaaactaaaattagatttta
aatgaaatcctggcatgtattgttccaaatgatctagtaagaacaatgac
agataaagcaatcctctgctacatatgcagctggagccgtgggccctcct
tgtgtactctctggttgctggtttagtccctgggagctctgggggtaggg
gtgcagtgggtccagttagtcgatatgttcttcttataggaaagcaatcc
cttcagctctcagtccttccctaactttactatggtgtccccgagctcag
tttgatactggcctgtggcatgtctgtatcctaatctggcatcagtagta
gga
attcatccatggccaacctgctactacctagattgcttctctacagtaat
cactagactataagtccttacaggtcagaaaactcctaagcctgttttgt
tgaacctgtgtcttccatttagtacctcattaatcaatatgtgtttcatg
catagacagagattcctcagacatacttcatcggtaagaaacatcaccca
ggcaaaaagagagacaataggaattttaatgcacagaaagtcctgtagag
acccacaggtagcagaaagaagcactgggcctgcaaactcaataatggag
aaagagaaagagggagggagggagggaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_65210387_65211495
seq2: B6Ng01-098O23.b_48_1150 (reverse)

seq1  TCCTTCTACTGATGCCAGATAAGGATACAGACATG-CACAGCCAAGTATC  49
      |||| ||||||||||||||| |||||||||||||| ||||| | ||||||
seq2  TCCTACTACTGATGCCAGATTAGGATACAGACATGCCACAGGCCAGTATC  50

seq1  AAACTGAGCTCGGGGACACCAATAGAAAAGTTAGGGGAAGGACTGAAGGA  99
      |||||||||||||||||||| |||| ||||||| ||||||||||||  ||
seq2  AAACTGAGCTCGGGGACACC-ATAGTAAAGTTA-GGGAAGGACTGA--GA  96

seq1  GCTGAAGGGGATTGCTATCCTATAGGAAGAACAATATCGACTAACTGGAC  149
      |||||| ||||||||| ||||||| ||||||| |||||||||||||||||
seq2  GCTGAA-GGGATTGCTTTCCTATAAGAAGAAC-ATATCGACTAACTGGAC  144

seq1  CCACCTGCACCCCTACCCCCAGAGCTCCCAGGGACTAAACCAGCAACCAG  199
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCA-CTGCACCCCTACCCCCAGAGCTCCCAGGGACTAAACCAGCAACCAG  193

seq1  AGAGTACACAAGGAGGGCCCACGGCTCCAGCTGCATATGTAGCAGAGGAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTACACAAGGAGGGCCCACGGCTCCAGCTGCATATGTAGCAGAGGAT  243

seq1  TGCTTTATCTGTCATTGTTCTTACTAGATCATTTGGAACAATACATGCCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTATCTGTCATTGTTCTTACTAGATCATTTGGAACAATACATGCCA  293

seq1  GGATTTCATTTAAAATCTAATTTTAGTTTCTCTGTTTTTGATCATATATT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCATTTAAAATCTAATTTTAGTTTCTCTGTTTTTGATCATATATT  343

seq1  TATAAGTGTATGAATGTTTGTGTGAGTATGCCTGCACTACCTGTTCATAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGTGTATGAATGTTTGTGTGAGTATGCCTGCACTACCTGTTCATAT  393

seq1  GCACACATGTTTCTCTCTCTCTGTGTGTGTGTTCTTAGAAACAAATGAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACATGTTTCTCTCTCTCTGTGTGTGTGTTCTTAGAAACAAATGAAA  443

seq1  GTATATACTGCAAGCACTCTGACTCCTAGCATTTGATGGGATCAACATTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATACTGCAAGCACTCTGACTCCTAGCATTTGATGGGATCAACATTA  493

seq1  GCATGGTCATTGCATTTCATAACAAAAAAGGTCTGCAATTCCAGAACTCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGTCATTGCATTTCATAACAAAAAAGGTCTGCAATTCCAGAACTCA  543

seq1  TAAATGTTTCCAAGTTCAAGCTAATCAGTTAGTAAACCAAGTTGAGCAGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTTTCCAAGTTCAAGCTAATCAGTTAGTAAACCAAGTTGAGCAGG  593

seq1  AGGAGAAAAGCAGTCACAGAAATGTTAAGCAATCAAAATAAACTAGGATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAAAAGCAGTCACAGAAATGTTAAGCAATCAAAATAAACTAGGATT  643

seq1  TATTCCTAACACTATTGTTTCTTTCTTATTTGAACTTGCATAAATGGATC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCTAACACTATTGTTTCTTTCTTATTTGAACTTGCATAAATGGATC  693

seq1  CTCTTGTTAAACCTCAGTTTCCCTGTGTGCAAAATGTAGAGGACAATGAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTTAAACCTCAGTTTCCCTGTGTGCAAAATGTAGAGGACAATGAT  743

seq1  ACATTATTGACAGTTAAATTAAGTTCAATAAATATTACTTACTGACCAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATTGACAGTTAAATTAAGTTCAATAAATATTACTTACTGACCAAA  793

seq1  ATTAAGAAAGGGTGAACAAGGCCCAGTGGTTAATTTTGAAGGACTATAGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGAAAGGGTGAACAAGGCCCAGTGGTTAATTTTGAAGGACTATAGT  843

seq1  TTAATGGTAAAGATAACACACAAACAATTATAATTACTATGGTTCAAATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGGTAAAGATAACACACAAACAATTATAATTACTATGGTTCAAATG  893

seq1  TTGTGAAGTCATATACATAGGAGATTGTGAGAAGACAAAGAAAGGAGACT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAAGTCATATACATAGGAGATTGTGAGAAGACAAAGAAAGGAGACT  943

seq1  TTCCAGCTCTAAGATTATGATAGTGCCTGAGGAATTCTAAACTCTACGTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGCTCTAAGATTATGATAGTGCCTGAGGAATTCTAAACTCTACGTA  993

seq1  AACAACCTGCATTTTATTAAGATGTTTAGGACAATGCACACAGAATACCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACCTGCATTTTATTAAGATGTTTAGGACAATGCACACAGAATACCA  1043

seq1  TTAAGCCTATGAATTAAATTCCATTTTCTATACTTCCAAAGCCTATACTA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCCTATGAATTAAATTCCATTTTCTATACTTCCAAAGCCTATACTA  1093

seq1  TTATGAATTC  1109
      ||||||||||
seq2  TTATGAATTC  1103

seq1: chr4_65041633_65041963
seq2: B6Ng01-098O23.g_75_405

seq1  ATTCATCCATGGCCAACCTGCTACTACCTAGATTGCTTCTCTACAGTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCCATGGCCAACCTGCTACTACCTAGATTGCTTCTCTACAGTAAT  50

seq1  CACTAGACTATAAGTCCTTACAGGTCAGAAAACTCCTAAGCCTGTTTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGACTATAAGTCCTTACAGGTCAGAAAACTCCTAAGCCTGTTTTGT  100

seq1  TGAACCTGTGTCTTCCATTTAGTACCTCATTAATCAATATGTGTTTCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCTGTGTCTTCCATTTAGTACCTCATTAATCAATATGTGTTTCATG  150

seq1  CATAGACAGAGATTCCTCAGACATACTTCATCGGTAAGAAACATCACCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGACAGAGATTCCTCAGACATACTTCATCGGTAAGAAACATCACCCA  200

seq1  GGCAAAAAGAGAGACAATAGGAATTTTAATGCACAGAAAGTCCTGTAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAAAGAGAGACAATAGGAATTTTAATGCACAGAAAGTCCTGTAGAG  250

seq1  ACCCACAGGTAGCAGAAAGAAGCACTGGGCCTGCAAACTCAATAATGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACAGGTAGCAGAAAGAAGCACTGGGCCTGCAAACTCAATAATGGAG  300

seq1  AAAGAGAAAGAGGGAGGGAGGGAGGGAGGGA  331
      |||||||||||||||||||||||||||||||
seq2  AAAGAGAAAGAGGGAGGGAGGGAGGGAGGGA  331