BAC Information

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BAC

Clone NameB6Ng01-099P08
Chromosome4 (Build37)
Map Location 127,908,522 - 127,909,336
singlet/doubletsinglet
Overlap genenone
Upstream geneDlgap3, BC003266, Gja4, Gjb3, Gjb4, Gjb5, LOC667296, LOC635169, 4930465A12Rik
Downstream geneHmgb4, 4930546G22Rik, Zscan20, Tlr12, Phc2, A3galt2, BC039093, LOC667354, Trim62, Adc, Ak2, Ibrdc3, Tmem54, Hpca, Fndc5, S100pbp, Yars, C77080
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099P08.bB6Ng01-099P08.g
ACCDH909602DH909603
length1,162816
definitionDH909602|Mus musculus domesticus DNA, BAC clone: B6Ng01-099P08, 5' end.DH909603|Mus musculus domesticus DNA, BAC clone: B6Ng01-099P08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggagatcagtctggctgttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaagatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctggccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatactcaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgtccctccttagaagtgggag
caaaacacccttggaaggagttacagagacaaagtttggagctgagataa
aaggatggaccatgtagacactaccatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcagattatgctgaaag
gaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaagca
tagaagtggatgctcacagtcggctattggatggatcacatggcctccat
ggaggagctagagaaagtaccaagaagctaaacggatctgcaacacttat
aggtggacaacatttatgactaccagatcccggagctcttgactctagct
gcatatgcatcaaaagaatggcctagtcgcatcactgcagagagcccatt
gaccgcactttatttgctccagttcaggaacgcaaggcataaagggaagt
gtggtggatagg
gaattcatcatcgaaatctacatatttcaatcccctgatatgtgctcaga
ttcctaacctgattaatatgtaaagtgctttatcctaggacttactaaga
gtgaacccagcgtggttctcaggaccagcatggctcctggcctccgggga
tctgtcacgtgtaagagataccagggtaccaggttgggaggggccgtgga
agttcatcacctactgggtcaaggtatcaaagggtccagctgagagggca
catcagacccctggacgggtcagtactgtgatttcaaacatccctgcttg
gtatcccaaaaagacatcgctgtgtggctcagcacacagcaccccaaact
gatgcagcctatatcctagtgtctataaaccccaatgagatacagctccc
ttctacgtagaaggccagccaataacattacctgtgtgacaacaccaccc
ggccagatctttgtgctgtctctgcatgtcctcttacaaagaaaaccaaa
gtttggcaagaagcctttcagccttcctccacagccagagccctggctct
gcccttactgccaccagccaatctcttgccataccccaaatccctcactt
taagacagagctcaaaacctctgtcatctcaggcaaaatctctccacctg
agatcttggtgttgacttaaattggaacagttagggtctatatcttcttg
ggctcagattattggctccatacagagatagcccttgcccctctgatcac
atacaggaggttaatgctgtaaagtgctactctctctctctctctctctc
tctctctctctcacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_127908522_127909336
seq2: B6Ng01-099P08.g_68_883

seq1  GAATTCATCATCGAAATCTACATATTTCAATCCCCTGATATGTGCTCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCATCGAAATCTACATATTTCAATCCCCTGATATGTGCTCAGA  50

seq1  TTCCTAACCTGATTAATATGTAAAGTGCTTTATCCTAGGACTTACTAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAACCTGATTAATATGTAAAGTGCTTTATCCTAGGACTTACTAAGA  100

seq1  GTGAACCCAGCGTGGTTCTCAGGACCAGCATGGCTCCTGGCCTCCGGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACCCAGCGTGGTTCTCAGGACCAGCATGGCTCCTGGCCTCCGGGGA  150

seq1  TCTGTCACGTGTAAGAGATACCAGGGTACCAGGTTGGGAGGGGCCGTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCACGTGTAAGAGATACCAGGGTACCAGGTTGGGAGGGGCCGTGGA  200

seq1  AGTTCATCACCTACTGGGTCAAGGTATCAAAGGGTCCAGCTGAGAGGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATCACCTACTGGGTCAAGGTATCAAAGGGTCCAGCTGAGAGGGCA  250

seq1  CATCAGACCCCTGGACGGGTCAGTACTGTGATTTCAAACATCCCTGCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGACCCCTGGACGGGTCAGTACTGTGATTTCAAACATCCCTGCTTG  300

seq1  GTATCCCAAAAAGACATCGCTGTGTGGCTCAGCACACAGCACCCCAAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCCCAAAAAGACATCGCTGTGTGGCTCAGCACACAGCACCCCAAACT  350

seq1  GATGCAGCCTATATCCTAGTGTCTATAAACCCCAATGAGATACAGCTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAGCCTATATCCTAGTGTCTATAAACCCCAATGAGATACAGCTCCC  400

seq1  TTCTACGTAGAAGGCCAGCCAATAACATTACCTGTGTGACAACACCACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACGTAGAAGGCCAGCCAATAACATTACCTGTGTGACAACACCACCC  450

seq1  GGCCAGATCTTTGTGCTGTCTCTGCATGTCCTCTTACAAAGAAAACCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGATCTTTGTGCTGTCTCTGCATGTCCTCTTACAAAGAAAACCAAA  500

seq1  GTTTGGCAAGAAGCCTTTCAGCCTTCCTCCACAGCCAGAGCCCTGGCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGCAAGAAGCCTTTCAGCCTTCCTCCACAGCCAGAGCCCTGGCTCT  550

seq1  GCCCTTACTGCCACCAGCCAATCTCTTGCCATACCCCAAATCCCTCACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTACTGCCACCAGCCAATCTCTTGCCATACCCCAAATCCCTCACTT  600

seq1  TAAGACAGAGCTCAAAACCTCTGTCATCTCAGGCAAAATCTCTCCACCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACAGAGCTCAAAACCTCTGTCATCTCAGGCAAAATCTCTCCACCTG  650

seq1  AGATCTTGGTGTTGACTTAAATTGGAACAGTTAGGGTCTATATCTTCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTTGGTGTTGACTTAAATTGGAACAGTTAGGGTCTATATCTTCTTG  700

seq1  GGCTCAGATTATTGGCTCCATACAGAGATAGCCCTTGCCCCTCTGATCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCAGATTATTGGCTCCATACAGAGATAGCCCTTGCCCCTCTGATCAC  750

seq1  ATACAGGAGGTTAATGCTGT-AAGTGCTACTCTCTCTCTCTCTCTCTCTC  799
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ATACAGGAGGTTAATGCTGTAAAGTGCTACTCTCTCTCTCTCTCTCTCTC  800

seq1  TCTCTCTCTCTCACAC  815
      ||||||||||||||||
seq2  TCTCTCTCTCTCACAC  816