BAC Information

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BAC

Clone NameB6Ng01-100B05
Chromosome4 (Build37)
Map Location 94,017,546 - 94,187,923
singlet/doubletdoublet
Overlap gene5830433M19Rik
Upstream genenone
Downstream genePlaa, LOC667250, Lrrc19, Ift74, Tek, 4930579C15Rik, LOC100039252, Mysm1, LOC100039265, LOC665029, Jun, LOC100042411
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100B05.bB6Ng01-100B05.g
ACCDH909683DH909684
length1,127938
definitionDH909683|Mus musculus domesticus DNA, BAC clone: B6Ng01-100B05, 5' end.DH909684|Mus musculus domesticus DNA, BAC clone: B6Ng01-100B05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,186,792 - 94,187,923)(94,017,546 - 94,018,488)
sequence
gaattcattgtgtctccctggcacctaacataattctaagaacttgggca
ttaaatgattgaatactattttaaaagtttttatttttattgcttaggca
agatacctgtgtagattctacttcatccctgagagagaacaaacaaccag
aagttttggaatcaaaacaaggtatggatcaaatacttaattttatatag
cttttaccaacggtaaatttccagtctgaaaattcaccttgttttacaga
gagggaaatggagtgctgtatttgtccatgatcttcctagctacttggtg
acctgagtgttgtgtgattggtttcaggtgcctccagaaggttttactat
cttgaatggtttcatttccatgatttctattatgtgttttaggttgcaaa
atagaggtgagttagttgggtacctttgagttatatgtgcaacaacaaag
atgataactttgtagggtaactacccctagtccctgtgagaagatagttt
cccttattttctttcttccttagagaagaaattctttaagtcaatttgac
ataaaccatctggtatatataaagtagtaatattaatttatttaagccat
atagatcaatggggctgattatttaaatgctttaaaaattctcatcttta
ctaggaaaagttggaagtaatatattttttttattgttcaaatgtcatct
tatgtttttttctatttgtaaaatgatgacttaaggaaattttttgtaaa
acttgagctgtaggaactttccagtagagagaagcaggtttctatttctt
ttggcagaagtactgaagcttcatgttgtttactgataattgatataaca
aagtagaaaatacataatttttaaatttgttatatatatctaacgtatat
ataatctagatttttaaatgcaatcatgtttattaatattcttgatgctg
ttggaaattctccaatgcttttagaaattctcttgtattaggctcctaag
ttgcagagaaaataattaatttgttgctgtgactactgagttatctcaca
gatagaaacagatttggttcatcagcaatttctttgtctaaaataacaag
tcataaacacatgtttcagtagtataa
gaattctcctggttggctccatttgcattagttgtcagaagccagcatga
taaaagttctccaggcagagactagaggaggaagaggagctcatgatgtg
aggttccaagccctctaagagaagctggacatactgtgggctgtgtgctt
ggactgagttcaatataaaagctgcatcttgtgcactgctcctctgttcc
catagaccacagcctggtctagtttttgacctttgggtccatgccaggtc
attctgggattcccagtgatccactgattccccatctaagtaccaacatg
atgaacagacatgaagaccccatccagactttttacatctttaagcataa
gtgagaactgaatcagccaaagcttagcccttgatgtcgcatgaacctgg
aggaacaggtgtgaggctggggaagtaacagtcccattggccccgccctc
tgctttgtgcttcagcctcggcagaagggagattgtatgagggaaatgtt
aacaatgataaatgagataccaaaagaaatgccatgcctaggatctacac
atatgtttgctcttccctgtctaagaaaatttaagtaagttgtgatatgt
acctttatcccaacactcaggaagcagaggcaggtagaggatctgcctaa
gtttgaagccagcctagtctacttaatgagctccatgacagctggggcta
cataggaagaccctgtctcaaacaaagggagggaatattgggccccattt
tggctctggtttgggccttgaggcaaacccgagcctggctagagtttctg
cggccttgtggggaaagccttagcctggctcgagttttgagacctgtctc
agtcacttcctatcaggtgactcacaagacctgtttgccctgcctctgcc
tgccatgctgatatagagctttgcattggccctgtcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_94186792_94187923
seq2: B6Ng01-100B05.b_48_1174 (reverse)

seq1  TTATACTAACTGAAAACAATGTGTTTATGACTTGTATTTTTATGACAAAG  50
      ||||||| |||||||   |||||||||||||||||  ||||| |||||||
seq2  TTATACT-ACTGAAA--CATGTGTTTATGACTTGTTATTTTA-GACAAAG  46

seq1  AAA-TGCTGATGAACCAAATCTGTTTCTATCTGTGAGGATACTCAGTAGT  99
      ||| |||||||||||||||||||||||||||||||||   ||||||||||
seq2  AAATTGCTGATGAACCAAATCTGTTTCTATCTGTGAGATAACTCAGTAGT  96

seq1  CACAGC-ACAAATATATAATTTTCTCTGGCAACTTAAGAGCCTAATACAA  148
      |||||| ||||||  || ||||||||| |||||||| |||||||||||||
seq2  CACAGCAACAAATTAATTATTTTCTCT-GCAACTTAGGAGCCTAATACAA  145

seq1  GAGAATTTCTAAAAAGCATTGGAGAATTTCCAACAGCATCAAGAATATTA  198
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTTCT-AAAAGCATTGGAGAATTTCCAACAGCATCAAGAATATTA  194

seq1  ATAAACATGATTGCATTTTAAAAATCTAGATTATATATACGTTAGATATA  248
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATAAACATGATTGCA-TTTAAAAATCTAGATTATATATACGTTAGATATA  243

seq1  TATAACAAATTTAAAAATTATGTATTTTCTACTTTGTTATATCAATTATC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACAAATTTAAAAATTATGTATTTTCTACTTTGTTATATCAATTATC  293

seq1  AGT-AACAACATGAAGCTTCAGTACTTCTGCCTAAAAGAAATAGAAACCT  347
      ||| |||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGTAAACAACATGAAGCTTCAGTACTTCTGCC-AAAAGAAATAGAAACCT  342

seq1  GCTTCTCTCTACTGGAAAGTTCCTACAGCTCAAGTTTTACAAAAAATTTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTCTCTACTGGAAAGTTCCTACAGCTCAAGTTTTACAAAAAATTTC  392

seq1  CTTAAGTCATCATTTTACAAATAGAAAAAAACATAAGATGACATTTGAAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGTCATCATTTTACAAATAGAAAAAAACATAAGATGACATTTGAAC  442

seq1  AATAAAAAAAATATATTACTTCCAACTTTTCCTAGTAAAGATGAGAATTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAAAAATATATTACTTCCAACTTTTCCTAGTAAAGATGAGAATTT  492

seq1  TTAAAGCATTTAAATAATCAGCCCCATTGATCTATATGGCTTAAATAAAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGCATTTAAATAATCAGCCCCATTGATCTATATGGCTTAAATAAAT  542

seq1  TAATATTACTACTTTATATATACCAGATGGTTTATGTCAAATTGACTTAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTACTACTTTATATATACCAGATGGTTTATGTCAAATTGACTTAA  592

seq1  AGAATTTCTTCTCTAAGGAAGAAAGAAAATAAGGGAAACTATCTTCTCAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTCTTCTCTAAGGAAGAAAGAAAATAAGGGAAACTATCTTCTCAC  642

seq1  AGGGACTAGGGGTAGTTACCCTACAAAGTTATCATCTTTGTTGTTGCACA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACTAGGGGTAGTTACCCTACAAAGTTATCATCTTTGTTGTTGCACA  692

seq1  TATAACTCAAAGGTACCCAACTAACTCACCTCTATTTTGCAACCTAAAAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTCAAAGGTACCCAACTAACTCACCTCTATTTTGCAACCTAAAAC  742

seq1  ACATAATAGAAATCATGGAAATGAAACCATTCAAGATAGTAAAACCTTCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAATAGAAATCATGGAAATGAAACCATTCAAGATAGTAAAACCTTCT  792

seq1  GGAGGCACCTGAAACCAATCACACAACACTCAGGTCACCAAGTAGCTAGG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCACCTGAAACCAATCACACAACACTCAGGTCACCAAGTAGCTAGG  842

seq1  AAGATCATGGACAAATACAGCACTCCATTTCCCTCTCTGTAAAACAAGGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCATGGACAAATACAGCACTCCATTTCCCTCTCTGTAAAACAAGGT  892

seq1  GAATTTTCAGACTGGAAATTTACCGTTGGTAAAAGCTATATAAAATTAAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTCAGACTGGAAATTTACCGTTGGTAAAAGCTATATAAAATTAAG  942

seq1  TATTTGATCCATACCTTGTTTTGATTCCAAAACTTCTGGTTGTTTGTTCT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGATCCATACCTTGTTTTGATTCCAAAACTTCTGGTTGTTTGTTCT  992

seq1  CTCTCAGGGATGAAGTAGAATCTACACAGGTATCTTGCCTAAGCAATAAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAGGGATGAAGTAGAATCTACACAGGTATCTTGCCTAAGCAATAAA  1042

seq1  AATAAAAACTTTTAAAATAGTATTCAATCATTTAATGCCCAAGTTCTTAG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAACTTTTAAAATAGTATTCAATCATTTAATGCCCAAGTTCTTAG  1092

seq1  AATTATGTTAGGTGCCAGGGAGACACAATGAATTC  1132
      |||||||||||||||||||||||||||||||||||
seq2  AATTATGTTAGGTGCCAGGGAGACACAATGAATTC  1127

seq1: chr4_94017546_94018488
seq2: B6Ng01-100B05.g_69_1006

seq1  GAATTCTCCTGGTTGGCTCCATTTGCATTAGTTGTCAGAAGCCAGCATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGGTTGGCTCCATTTGCATTAGTTGTCAGAAGCCAGCATGA  50

seq1  TAAAAGTTCTCCAGGCAGAGACTAGAGGAGGAAGAGGAGCTCATGATGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTTCTCCAGGCAGAGACTAGAGGAGGAAGAGGAGCTCATGATGTG  100

seq1  AGGTTCCAAGCCCTCTAAGAGAAGCTGGACATACTGTGGGCTGTGTGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCCAAGCCCTCTAAGAGAAGCTGGACATACTGTGGGCTGTGTGCTT  150

seq1  GGACTGAGTTCAATATAAAAGCTGCATCTTGTGCACTGCTCCTCTGTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGAGTTCAATATAAAAGCTGCATCTTGTGCACTGCTCCTCTGTTCC  200

seq1  CATAGACCACAGCCTGGTCTAGTTTTTGACCTTTGGGTCCATGCCAGGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGACCACAGCCTGGTCTAGTTTTTGACCTTTGGGTCCATGCCAGGTC  250

seq1  ATTCTGGGATTCCCAGTGATCCACTGATTCCCCATCTAAGTACCAACATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGGATTCCCAGTGATCCACTGATTCCCCATCTAAGTACCAACATG  300

seq1  ATGAACAGACATGAAGACCCCATCCAGACTTTTTACATCTTTAAGCATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACAGACATGAAGACCCCATCCAGACTTTTTACATCTTTAAGCATAA  350

seq1  GTGAGAACTGAATCAGCCAAAGCTTAGCCCTTGATGTCGCATGAACCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAACTGAATCAGCCAAAGCTTAGCCCTTGATGTCGCATGAACCTGG  400

seq1  AGGAACAGGTGTGAGGCTGGGGAAGTAACAGTCCCATTGGCCCCGCCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACAGGTGTGAGGCTGGGGAAGTAACAGTCCCATTGGCCCCGCCCTC  450

seq1  TGCTTTGTGCTTCAGCCTCGGCAGAAGGGAGATTGTATGAGGGAAATGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGTGCTTCAGCCTCGGCAGAAGGGAGATTGTATGAGGGAAATGTT  500

seq1  AACAATGATAAATGAGATACCAAAAGAAATGCCATGCCTAGGATCTACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGATAAATGAGATACCAAAAGAAATGCCATGCCTAGGATCTACAC  550

seq1  ATATGTTTGCTCTTCCCTGTCTAAGAAAATTTAAGTAAGTTGTGATATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTTTGCTCTTCCCTGTCTAAGAAAATTTAAGTAAGTTGTGATATGT  600

seq1  ACCTTTATCCCAACACTCAGGAAGCAGAGGCAGGTAGAGGATCTGCCTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTATCCCAACACTCAGGAAGCAGAGGCAGGTAGAGGATCTGCCTAA  650

seq1  GTTTGAAGCCAGCCTAGTCTACTTAATGAGCTCCATGACAGCTGGGGCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAAGCCAGCCTAGTCTACTTAATGAGCTCCATGACAGCTGGGGCTA  700

seq1  CATAGGAAGACCCTGTCTCAAACAAAGGGAGGGAATATTGGGCCCCATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGAAGACCCTGTCTCAAACAAAGGGAGGGAATATTGGGCCCCATTT  750

seq1  TGGCTCTGGTTT-GGCCTTGAGGCCAAACCCGAGCCTGGCTAGAGTTTCT  799
      |||||||||||| |||||||||| ||||||||||||||||||||||||||
seq2  TGGCTCTGGTTTGGGCCTTGAGG-CAAACCCGAGCCTGGCTAGAGTTTCT  799

seq1  GCGGCCTTGT-GGGAAAGCCTAAGCCTGGCTCGAGTTTTGAGACCTGTCT  848
      |||||||||| |||||||||| ||||||||||||||||||||||||||||
seq2  GCGGCCTTGTGGGGAAAGCCTTAGCCTGGCTCGAGTTTTGAGACCTGTCT  849

seq1  CAGTCACTTCCATATCAGGGTGACTCAGCAAGACCTGTTTGGCCCTGCCT  898
      ||||||||||| ||||| ||||||||| |||||||||||| |||||||||
seq2  CAGTCACTTCC-TATCA-GGTGACTCA-CAAGACCTGTTT-GCCCTGCCT  895

seq1  CTGCCTGCCATTGCTGATATAGAGCTTTGCCATTGGCCCTGTCAG  943
      |||||||||| |||||||||||||||||| |||||||||||||||
seq2  CTGCCTGCCA-TGCTGATATAGAGCTTTG-CATTGGCCCTGTCAG  938