BAC Information

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BAC

Clone NameB6Ng01-100F03
Chromosome4 (Build37)
Map Location 16,644,085 - 16,755,244
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040095, LOC633695, Calb1, Decr1, Nbn, Osgin2, Ripk2, LOC667150, LOC383994
Downstream geneLOC100040154, LOC667212, LOC100040173
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100F03.bB6Ng01-100F03.g
ACCDH909852DH909853
length8771,155
definitionDH909852|Mus musculus domesticus DNA, BAC clone: B6Ng01-100F03, 5' end.DH909853|Mus musculus domesticus DNA, BAC clone: B6Ng01-100F03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(16,754,366 - 16,755,244)(16,644,085 - 16,645,250)
sequence
gaattcatctgaaataataaaccctcatttaatgtttaggtacttaattt
tcagacatgggtttttaaatgtatttttcttataacaaacacaatttcag
tttggatttattttcaactatgcttatgtaagaccataaggccttagtat
tgagtgcatgaccccccaaaacacaactggacaatagatcactgcaatgg
caaaaggttaattgttccaacgtgtgtggggttgctcaacctcacaggga
gagtcaactctggattcaaaaagcacagctcttttttactcttttttggg
atgggtgaacagctacattataattggtcaacaaagcagcaatatgtata
tttttaaactcagtggttgcagggaattctggcggcaaggtcggggcagt
ttgtggtttctttcagaattcagtgtggggcagggtaggggaatttttct
gagaactgctttggatttttgttgttgttgttgttgttgttatagttatt
gtttttgagaacagctaatcttgttttggcagctgtagacttagtctggt
cattttgactgctaaaattatacagtttagaaagttccttcaaaggggga
ctgagccaggtggtcttgaatttattttggattcttcatcctcccccctt
tttctctggtgcatttcaatcctgaaatgatgtctcactttttgcaccgt
ccgatattgttgtctgagcatcaaaatttgtatttgtacttaagcaatta
gggatgcatgggccaaaggctaagaacagaagcagattaagaagcggtag
taaacgggactaggtaggaacctttcagtgaggctccagggtctgggcac
atctcttttttttttttttccattttt
gaattcattgacattctggaacacaggctatttttgtgttgcttatgaag
tttggaaattggttctgactgatcaacagtgaaacatgtggaagattcca
atctgtttgttgtgtatatacagagtttagacaatggtagtttatataga
gatttgaacttttttatatccttataagtgactccttataagtgacacaa
ttactggggaagcaaagaagataagtaagaaacacttcaattgacatata
tttatccaatgaaaaagaaaagatttttttgttttgtgttttgttttgtt
ttgttttcgcttgcatttgaatgaagcaaaactaagttatcctgtcagga
atgattcgatgctcactgtaagtcgttttccacctcactctcccttctac
ctctctctttctctacatccatttcctactacaacacatgtttttatccc
tttagccccctagggaaaaaaaaagtcctcacacagtgagtgctgagcca
caattaaaaagcaatacaaatgcattctgagataccttcatttttaatgt
aaactttcaagcagttggtcattgtcagatggcatcagacacagtgttta
atgagtgcatcgcatagaaaaaactggtcttgtcagccttctaagaaacc
atgaggaaggaagtaatcattttctggagactgtattttgttttactagg
tgtccttattcccctccgacacccagacaaaattcattacacatccactg
accttgtatttccagttatttaattgttatccagctatattctcagcgac
agttattttggatagaatttaattactgtaatagatataagaagcaaccc
tagaaagactgattttgtaatcactatgttgaatagtagtaggtacattt
aacttttggtctcaagtcaattgtattacctaagtagtaaggcaaatgat
aactgctatcaagtatatatggagttcatgacacgccagaccaggtgaac
aggtgaagggaagctggcacatgcctctgctatggttatgtcaagtaagt
tgaggtccccaatgtactattatcagagtctaaatagagaagtgagaaag
aaaagacgcaggtgcagtacatgaaagaactctggacaaacacggttcct
gtgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_16754366_16755244
seq2: B6Ng01-100F03.b_47_923 (reverse)

seq1  AAAAATGGAAAAAAAAAAAAAAGAGATTGTGCCCAGACCCTGGAGCCTCA  50
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AAAAATGGAAAAAAAAAAAAAAGAGA-TGTGCCCAGACCCTGGAGCCTCA  49

seq1  CTGGAAGGGTCCCTACCTAGTCCCGTTTACTACCGCTTCTTATTCTGCTT  100
      || ||| ||| ||||||||||||||||||||||||||||||| |||||||
seq2  CT-GAAAGGTTCCTACCTAGTCCCGTTTACTACCGCTTCTTAATCTGCTT  98

seq1  CTGTTCTTAGCCTTTGGCCCATGCATCCCTAATTGCTTAAGTAC-AATAC  149
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTGTTCTTAGCCTTTGGCCCATGCATCCCTAATTGCTTAAGTACAAATAC  148

seq1  AAATTTTGATGCTCAGACAACAATATCGGACGGTGCAACAAAGTGAGACA  199
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAATTTTGATGCTCAGACAACAATATCGGACGGTGCAA-AAAGTGAGACA  197

seq1  TCATTTCAGGATTGAAATGCACCAGAGAAAAAGGGGGGAGGATGAAGAAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCAGGATTGAAATGCACCAGAGAAAAAGGGGGGAGGATGAAGAAT  247

seq1  CCAAAATAAATTCAAGACCACCTGGCTCAGTCCCCCTTTGAAGGAACTTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATAAATTCAAGACCACCTGGCTCAGTCCCCCTTTGAAGGAACTTT  297

seq1  CTAAACTGTATAATTTTAGCAGTCAAAATGACCAGACTAAGTCTACAGCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACTGTATAATTTTAGCAGTCAAAATGACCAGACTAAGTCTACAGCT  347

seq1  GCCAAAACAAGATTAGCTGTTCTCAAAAACAATAACTATAACAACAACAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAACAAGATTAGCTGTTCTCAAAAACAATAACTATAACAACAACAA  397

seq1  CAACAACAACAAAAATCCAAAGCAGTTCTCAGAAAAATTCCCCTACCCTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACAACAAAAATCCAAAGCAGTTCTCAGAAAAATTCCCCTACCCTG  447

seq1  CCCCACACTGAATTCTGAAAGAAACCACAAACTGCCCCGACCTTGCCGCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACACTGAATTCTGAAAGAAACCACAAACTGCCCCGACCTTGCCGCC  497

seq1  AGAATTCCCTGCAACCACTGAGTTTAAAAATATACATATTGCTGCTTTGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCCCTGCAACCACTGAGTTTAAAAATATACATATTGCTGCTTTGT  547

seq1  TGACCAATTATAATGTAGCTGTTCACCCATCCCAAAAAAGAGTAAAAAAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAATTATAATGTAGCTGTTCACCCATCCCAAAAAAGAGTAAAAAAG  597

seq1  AGCTGTGCTTTTTGAATCCAGAGTTGACTCTCCCTGTGAGGTTGAGCAAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGCTTTTTGAATCCAGAGTTGACTCTCCCTGTGAGGTTGAGCAAC  647

seq1  CCCACACACGTTGGAACAATTAACCTTTTGCCATTGCAGTGATCTATTGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACACGTTGGAACAATTAACCTTTTGCCATTGCAGTGATCTATTGT  697

seq1  CCAGTTGTGTTTTGGGGGGTCATGCACTCAATACTAAGGCCTTATGGTCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTGTGTTTTGGGGGGTCATGCACTCAATACTAAGGCCTTATGGTCT  747

seq1  TACATAAGCATAGTTGAAAATAAATCCAAACTGAAATTGTGTTTGTTATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAGCATAGTTGAAAATAAATCCAAACTGAAATTGTGTTTGTTATA  797

seq1  AGAAAAATACATTTAAAAACCCATGTCTGAAAATTAAGTACCTAAACATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATACATTTAAAAACCCATGTCTGAAAATTAAGTACCTAAACATT  847

seq1  AAATGAGGGTTTATTATTTCAGATGAATTC  879
      ||||||||||||||||||||||||||||||
seq2  AAATGAGGGTTTATTATTTCAGATGAATTC  877

seq1: chr4_16644085_16645250
seq2: B6Ng01-100F03.g_69_1223

seq1  GAATTCATTGACATTCTGGAACACAGGCTATTTTTGTGTTGCTTATGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGACATTCTGGAACACAGGCTATTTTTGTGTTGCTTATGAAG  50

seq1  TTTGGAAATTGGTTCTGACTGATCAACAGTGAAACATGTGGAAGATTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAATTGGTTCTGACTGATCAACAGTGAAACATGTGGAAGATTCCA  100

seq1  ATCTGTTTGTTGTGTATATACAGAGTTTAGACAATGGTAGTTTATATAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTTGTTGTGTATATACAGAGTTTAGACAATGGTAGTTTATATAGA  150

seq1  GATTTGAACTTTTTTATATCCTTATAAGTGACTCCTTATAAGTGACACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGAACTTTTTTATATCCTTATAAGTGACTCCTTATAAGTGACACAA  200

seq1  TTACTGGGGAAGCAAAGAAGATAAGTAAGAAACACTTCAATTGACATATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGGGGAAGCAAAGAAGATAAGTAAGAAACACTTCAATTGACATATA  250

seq1  TTTATCCAATGAAAAAGAAAAGATTTTTTTGTTTTGTGTTTTGTTTTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCCAATGAAAAAGAAAAGATTTTTTTGTTTTGTGTTTTGTTTTGTT  300

seq1  TTGTTTTCGCTTGCATTTGAATGAAGCAAAACTAAGTTATCCTGTCAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTCGCTTGCATTTGAATGAAGCAAAACTAAGTTATCCTGTCAGGA  350

seq1  ATGATTCGATGCTCACTGTAAGTCGTTTTCCACCTCACTCTCCCTTCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTCGATGCTCACTGTAAGTCGTTTTCCACCTCACTCTCCCTTCTAC  400

seq1  CTCTCTCTTTCTCTACATCCATTTCCTACTACAACACATGTTTTTATCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTTTCTCTACATCCATTTCCTACTACAACACATGTTTTTATCCC  450

seq1  TTTAGCCCCCTAGGGAAAAAAAAAGTCCTCACACAGTGAGTGCTGAGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCCCCCTAGGGAAAAAAAAAGTCCTCACACAGTGAGTGCTGAGCCA  500

seq1  CAATTAAAAAGCAATACAAATGCATTCTGAGATACCTTCATTTTTAATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAAAAAGCAATACAAATGCATTCTGAGATACCTTCATTTTTAATGT  550

seq1  AAACTTTCAAGCAGTTGGTCATTGTCAGATGGCATCAGACACAGTGTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTCAAGCAGTTGGTCATTGTCAGATGGCATCAGACACAGTGTTTA  600

seq1  ATGAGTGCATCGCATAGAAAAAACTGGTCTTGTCAGCCTTCTAAGAAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTGCATCGCATAGAAAAAACTGGTCTTGTCAGCCTTCTAAGAAACC  650

seq1  ATGAGGAAGGAAGTAATCATTTTCTGGAGACTGTATTTTGTTTTACTAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGAAGGAAGTAATCATTTTCTGGAGACTGTATTTTGTTTTACTAGG  700

seq1  TGTCCTTATTCCCCTCCGACACCCAGACAAAATTCATTACACATCCACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTATTCCCCTCCGACACCCAGACAAAATTCATTACACATCCACTG  750

seq1  ACCTTGTATTTCCAGTTATTTAATTGTTATCCAGCTATATTCTCAGCGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGTATTTCCAGTTATTTAATTGTTATCCAGCTATATTCTCAGCGAC  800

seq1  AGTAATTTTGGATAGAATTTAATTACTGTAATAGATATAAGAAGCAACCC  850
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATTTTGGATAGAATTTAATTACTGTAATAGATATAAGAAGCAACCC  850

seq1  TAGAAAGACTGATTTTGTAATCACTATGTTGAATAGTAGTAGGTACATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGACTGATTTTGTAATCACTATGTTGAATAGTAGTAGGTACATTT  900

seq1  AACTTTTGGTCTCAAGTCAATTGTATTACCTAAGTTAGTAAGGCAAATGA  950
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AACTTTTGGTCTCAAGTCAATTGTATTACCTAAG-TAGTAAGGCAAATGA  949

seq1  TTAACTGCTATCAAGTATATAT-GAGTTCATGACACGCCAGACCAGGTGA  999
       ||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  -TAACTGCTATCAAGTATATATGGAGTTCATGACACGCCAGACCAGGTGA  998

seq1  ACAAGTGGAAGGGAGGCTGGGCACATGCTCTTGCTTATGGTTAATGTCAA  1049
      ||| || ||||||| ||| |||||||||   ||| ||||||| |||||||
seq2  ACAGGT-GAAGGGAAGCT-GGCACATGCCTCTGC-TATGGTT-ATGTCAA  1044

seq1  GTAGGTTGAGGTCCCCAATGTACTATTATCAGAGTCTAAATAGGAGAGTG  1099
      ||| |||||||||||||||||||||||||||||||||||||||   ||||
seq2  GTAAGTTGAGGTCCCCAATGTACTATTATCAGAGTCTAAATAGAGAAGTG  1094

seq1  AG--AGAAAAGAAGGGCAGGGTGCAGTACCATGGAAGAACTCGTGGACAA  1147
      ||  ||||||||   ||| ||||||||| |||| |||||||| ||||| |
seq2  AGAAAGAAAAGA--CGCA-GGTGCAGTA-CATGAAAGAACTC-TGGAC-A  1138

seq1  AACACAGGTTCCTGGTGAT  1166
      ||||| ||||||| |||||
seq2  AACAC-GGTTCCT-GTGAT  1155