BAC Information

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BAC

Clone NameB6Ng01-101F04
Chromosome4 (Build37)
Map Location 11,949,839 - 12,081,031
singlet/doubletdoublet
Overlap geneTmem67, C430048L16Rik, LOC230010, LOC623671, LOC100039958, Rbm12b, 6720467C03Rik
Upstream gene2310030N02Rik, LOC546828, LOC666897, Trp53inp1, Ccne2, Ints8, Dpy19l4, Rbm35a, LOC634834, 1110037F02Rik, LOC100039847, E130016E03Rik, LOC100039862, Gem, Cdh17, Ppm2c
Downstream geneLOC545592, OTTMUSG00000004461
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101F04.bB6Ng01-101F04.g
ACCDH910543DH910544
length887697
definitionDH910543|Mus musculus domesticus DNA, BAC clone: B6Ng01-101F04, 5' end.DH910544|Mus musculus domesticus DNA, BAC clone: B6Ng01-101F04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,080,139 - 12,081,031)(11,949,839 - 11,950,534)
sequence
gaattcacatttctgtttttatgtcatctaacttgcaaatgtagaatcac
tttaaactcacttgacaggttaaactgtaaaatgaaatgctattatgaaa
ctgggggcagaggggaaattaaaggaaattatgctgattaaaaaaaagat
ttttttttctggattacatagtctttctttcatcatcctacatatggtag
tgtatatttttctatatatgttctattaaaaaagattgtatttctaagca
tttcagatttaatgcactataaattcatgtgtgactcacaaaatcacata
cctattaaaggtgaagaaagtatgtgagtaacaaaagatttaataatgcc
tcatactttcttttaggataaaatttgaggttttgattaccagaagaggt
cagttaataatcctatgccctaatgccttaagtaaaaacactgcttcttt
tacttttattatataaccttatgtttcatcatctggtatgaaaatttagt
gtttttaactaaaattgaacacagtaatgatttgagatactgataacagg
ttttataagtgtatatataaatgattacattctaattttaaaaggccaca
ttcaacctttcgtgttttaaaacaaaactgctctcactctacagctctgc
acattctacttgtataagttattaataattggaaggcaagtactttgcta
aaaatgttgccttatcttagaatgtcataaagcataaacacactctgctg
tcttatcaagccaccactgtcaacatgtaattgctttactcctaagctac
aaaatattgtatatcttaccattttcttttggttaagaaccatgcttttg
tgactctcaagcatgatcaaacaagaaaggtttgttt
gaattctcatttctgctcaaaccagaagattgaaacaaattctgtcaaaa
gctgtaagtactgtggaaaaatagttttcagtttaataattggaaaagag
aaggagaaatagaagctaagtgtagttctgaggattcaagtctccagtta
ctgagaaaatcacaggctggaagatagcttggccaatccatatgctgcct
cagccattatcctcttcagcagttggctctgtagaatacgacgacattta
ataatactggataaggaggttgttctgcttaaaaatatatcttttaaaat
gcatatgccttttcaattcgtatataattgatataagtataaagttttag
ctaaatggtcattctcagactttattaaaggaaataaactcatcaaatgc
ttgtggattggagactgggaagatggctcagttgataaagtgcttgggag
gcaagcataaggactgagctcagacgctgagcatgcacataagaagccaa
tgtggcatcgtgtgactgtaatcccagccccgaggagacaaggcccatgg
ggcttgtaaacctgcctgggattgctcagtgagttcccagactgtcataa
aaacatggtgggaagtgactgaggaagacactagcctccacacataggta
catatgtgcttgcttaataccatacaatattcatgcaagtgcatgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_12080139_12081031
seq2: B6Ng01-101F04.b_46_932 (reverse)

seq1  AAACAAACTTTTCTGTTTTGATCATTGCTTTGAGAGTCACAAAAGCATGG  50
      |||||||| |||||  |||||||| ||| |||||||||||||||||||||
seq2  AAACAAACCTTTCTTGTTTGATCA-TGC-TTGAGAGTCACAAAAGCATGG  48

seq1  TTCTTTACCAAAAGAAAATGGTAAGATATAACAAATATTTTGTAGCTTTA  100
      ||||| ||||||||||||||||||||||||   ||||||||||||| |||
seq2  TTCTTAACCAAAAGAAAATGGTAAGATATA--CAATATTTTGTAGC-TTA  95

seq1  GGAGTAAAGCATATACATGTTGACAGTGGTGGCTTGATAAGACAGCAGAG  150
      |||||||||||  |||||||||||||||||||||||||||||||||||||
seq2  GGAGTAAAGCAATTACATGTTGACAGTGGTGGCTTGATAAGACAGCAGAG  145

seq1  TGTGTTTAATGCTTTATGACATTCTAAGATAAGGCAACATTTTTAGCAAA  200
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTT-ATGCTTTATGACATTCTAAGATAAGGCAACATTTTTAGCAAA  194

seq1  GTACTTGCCTTCCAATTATTAATAACTTATACAAGTAGAATGTGCAGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTGCCTTCCAATTATTAATAACTTATACAAGTAGAATGTGCAGAGC  244

seq1  TGTAGAGTGAGAGCAGTTTTGTTTTAAAACACGAAAGGTTGAATGTGGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAGTGAGAGCAGTTTTGTTTTAAAACACGAAAGGTTGAATGTGGCC  294

seq1  TTTTAAAATTAGAATGTAATCATTTATATATACACTTATAAAACCTGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAATTAGAATGTAATCATTTATATATACACTTATAAAACCTGTTA  344

seq1  TCAGTATCTCAAATCATTACTGTGTTCAATTTTAGTTAAAAACACTAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTATCTCAAATCATTACTGTGTTCAATTTTAGTTAAAAACACTAAAT  394

seq1  TTTCATACCAGATGATGAAACATAAGGTTATATAATAAAAGTAAAAGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATACCAGATGATGAAACATAAGGTTATATAATAAAAGTAAAAGAAG  444

seq1  CAGTGTTTTTACTTAAGGCATTAGGGCATAGGATTATTAACTGACCTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTTTTTACTTAAGGCATTAGGGCATAGGATTATTAACTGACCTCTT  494

seq1  CTGGTAATCAAAACCTCAAATTTTATCCTAAAAGAAAGTATGAGGCATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAATCAAAACCTCAAATTTTATCCTAAAAGAAAGTATGAGGCATTA  544

seq1  TTAAATCTTTTGTTACTCACATACTTTCTTCACCTTTAATAGGTATGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATCTTTTGTTACTCACATACTTTCTTCACCTTTAATAGGTATGTGA  594

seq1  TTTTGTGAGTCACACATGAATTTATAGTGCATTAAATCTGAAATGCTTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTGAGTCACACATGAATTTATAGTGCATTAAATCTGAAATGCTTAG  644

seq1  AAATACAATCTTTTTTAATAGAACATATATAGAAAAATATACACTACCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAATCTTTTTTAATAGAACATATATAGAAAAATATACACTACCAT  694

seq1  ATGTAGGATGATGAAAGAAAGACTATGTAATCCAGAAAAAAAAATCTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGGATGATGAAAGAAAGACTATGTAATCCAGAAAAAAAAATCTTTT  744

seq1  TTTTAATCAGCATAATTTCCTTTAATTTCCCCTCTGCCCCCAGTTTCATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATCAGCATAATTTCCTTTAATTTCCCCTCTGCCCCCAGTTTCATA  794

seq1  ATAGCATTTCATTTTACAGTTTAACCTGTCAAGTGAGTTTAAAGTGATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCATTTCATTTTACAGTTTAACCTGTCAAGTGAGTTTAAAGTGATTC  844

seq1  TACATTTGCAAGTTAGATGACATAAAAACAGAAATGTGAATTC  893
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTGCAAGTTAGATGACATAAAAACAGAAATGTGAATTC  887

seq1: chr4_11949839_11950534
seq2: B6Ng01-101F04.g_70_766

seq1  GAATTCTCATTTCTGCTCAAACCAGAAGATTGAAACAAATTCTGTCAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATTTCTGCTCAAACCAGAAGATTGAAACAAATTCTGTCAAAA  50

seq1  GCTGTAAGTACTGTGGAAAAATAGTTTTCAGTTTAATAATTGGAAAAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAAGTACTGTGGAAAAATAGTTTTCAGTTTAATAATTGGAAAAGAG  100

seq1  AAGGAGAAATAGAAGCTAAGTGTAGTTCTGAGGATTCAAGTCTCCAGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAAATAGAAGCTAAGTGTAGTTCTGAGGATTCAAGTCTCCAGTTA  150

seq1  CTGAGAAAATCACAGGCTGGAAGATAGCTTGGCCAATCCATATGCTGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAAAATCACAGGCTGGAAGATAGCTTGGCCAATCCATATGCTGCCT  200

seq1  CAGCCATTATCCTCTTCAGCAGTTGGCTCTGTAGAATACGACGACATTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCATTATCCTCTTCAGCAGTTGGCTCTGTAGAATACGACGACATTTA  250

seq1  ATAATACTGGATAAGGAGGTTGTTCTGCTTAAAAATATATCTTTTAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATACTGGATAAGGAGGTTGTTCTGCTTAAAAATATATCTTTTAAAAT  300

seq1  GCATATGCCTTTTCAATTCGTATATAATTGATATAAGTATAAAGTTTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATGCCTTTTCAATTCGTATATAATTGATATAAGTATAAAGTTTTAG  350

seq1  CTAAATGGTCATTCTCAGACTTTATTAAAGGAAATAAACTCATCAAATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATGGTCATTCTCAGACTTTATTAAAGGAAATAAACTCATCAAATGC  400

seq1  TTGTGGATTGGAGACTGGGAAGATGGCTCAGTTGATAAAGTGCTTGGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGATTGGAGACTGGGAAGATGGCTCAGTTGATAAAGTGCTTGGGAG  450

seq1  GCAAGCATAAGGACTGAGCTCAGACGCTGAGCATGCACATAAGAAGCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCATAAGGACTGAGCTCAGACGCTGAGCATGCACATAAGAAGCCAA  500

seq1  TGTGGCATCGTGTGACTGTAATCCCAGCCCCGAGGAGACAAGGCCCATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCATCGTGTGACTGTAATCCCAGCCCCGAGGAGACAAGGCCCATGG  550

seq1  GGCTTGTAAACCTGCCTGGGATTGCTCAGTGAGTTCCCAGACTGTCATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGTAAACCTGCCTGGGATTGCTCAGTGAGTTCCCAGACTGTCATAA  600

seq1  AAACATGGTGGGAAGTGACTGAGGAAGACACTAGCCTCCACACATAGGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGGTGGGAAGTGACTGAGGAAGACACTAGCCTCCACACATAGGTA  650

seq1  CATATGTGCATGC-TAATACCATACAATATTCATGCAAGTGCATGCT  696
      ||||||||| ||| |||||||||||||||||||||||||||||||||
seq2  CATATGTGCTTGCTTAATACCATACAATATTCATGCAAGTGCATGCT  697