BAC Information

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BAC

Clone NameB6Ng01-101G06
Chromosome4 (Build37)
Map Location 135,578,577 - 135,735,210
singlet/doubletdoublet
Overlap geneRpl11, Id3, E2f2
Upstream geneRunx3, Clic4, LOC676072, Srrm1, A330049M08Rik, LOC665287, Dscr1l2, Npal3, 4930555I21Rik, Grhl3, 1700029M20Rik, Il28ra, Il22ra1, LOC665334, Myom3, Fusip1, Pnrc2, Cnr2, Fuca1, Hmgcl, Gale, Lypla2, 1110049F12Rik, LOC669445, Tceb3
Downstream geneDdefl1, Tcea3, Zfp46, Hnrpr, Htr1d, LOC100042540, Luzp1, Aof2, LOC667080, LOC433770, 4930549C01Rik, BC029684, Ephb2, C1qb, C1qc, C1qa, Epha8, Zbtb40
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101G06.bB6Ng01-101G06.g
ACCDH910587DH910588
length889111
definitionDH910587|Mus musculus domesticus DNA, BAC clone: B6Ng01-101G06, 5' end.DH910588|Mus musculus domesticus DNA, BAC clone: B6Ng01-101G06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(135,734,322 - 135,735,210)(135,578,577 - 135,578,685)
sequence
gaattccctccacctcagctttagaaaggttctagccctgtggttctcac
ccttccaaatgctacagtcctttaatacagtttcctcctgttgtggtgat
ccacaacggtaaaattctttttgcttcttcctaactgtaatcttgctact
gttatgaatcataaggtagatatctgtgttttctggtggtcctaggtgag
cccagtgaaagaggcattcgacccccatgggggccttgacccaaaggccg
agaaccgttgctctagctggacagcctggagaccttcaggtggtagactg
gattattccagattttgcttcctttgaatcacttagcagtctgtatgtgg
gaggcagaccctgcttagcttctaatcctcccagagctctctctctttta
gaaaaaggtctgataaacccaaatatggaaaactttaaaaaaaaaaaaaa
aagctcccaaataaacactagtcatcgtggttagctctgggggaagggta
gggcaggtgcctaaagtacaggaagccattcaaggcgttagtcctgactc
cactgactagctgtgtgaccctggccaagtcctgagttacctcatcagga
atcggaacgtaactatcttctgaacagaatcaatcgtgagaatacacaag
aaaccttggaaaagggaattgtctgataggcgcctgcgctggtgacaggg
tgggggctcctgcctcgtgccaccccaccataggtgcccatcagaagctc
ttacttttggggcttggcaaaccatccacgcggatgcacttccccttggg
ggtccggaattcagggaccgtaggcctcccaatgccctccaggtcaactt
ctttttgggcctttgacagacagaggggggggggagaaa
ccggacagccagggctatacagagaaaccctgtctcgaaaaaccaaaaaa
gaaaaaaagaaaagaaaagagccaggcagtggtgatgcatgcctttaatc
ccagcacttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_135734322_135735210
seq2: B6Ng01-101G06.b_45_933 (reverse)

seq1  TTTCTCCCCCCCCCCTCTGTCTGTCAAAGG-CCAAAAGGAAGTTGGACCT  49
      |||||||||||||||||||||||||||||| |||||| |||||| |||||
seq2  TTTCTCCCCCCCCCCTCTGTCTGTCAAAGGCCCAAAAAGAAGTT-GACCT  49

seq1  GGAGGGCATTGGGAGGCCTACGGTCCCTGAATTCCGGACCCCCAAGGGGA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGCATTGGGAGGCCTACGGTCCCTGAATTCCGGACCCCCAAGGGGA  99

seq1  AGTGCATCCGCGTGGATGGTTTGCCAAGCCCCAAAAGTAAGAGCTTCTGA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCATCCGCGTGGATGGTTTGCCAAGCCCCAAAAGTAAGAGCTTCTGA  149

seq1  TGGGCACCTATGGTGGGGTGGCACGAGGCAGGAGCCCCCACCCTGTCACC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCACCTATGGTGGGGTGGCACGAGGCAGGAGCCCCCACCCTGTCACC  199

seq1  AGCGCAGGCGCCTATCAGACAATTCCCTTTTCCAAGGTTTCTTGTGTATT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCAGGCGCCTATCAGACAATTCCCTTTTCCAAGGTTTCTTGTGTATT  249

seq1  CTCACGATTGATTCTGTTCAGAAGATAGTTACGTTCCGATTCCTGATGAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACGATTGATTCTGTTCAGAAGATAGTTACGTTCCGATTCCTGATGAG  299

seq1  GTAACTCAGGACTTGGCCAGGGTCACACAGCTAGTCAGTGGAGTCAGGAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTCAGGACTTGGCCAGGGTCACACAGCTAGTCAGTGGAGTCAGGAC  349

seq1  TAACGCCTTGAATGGCTTCCTGTACTTTAGGCACCTGCCCTACCCTTCCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGCCTTGAATGGCTTCCTGTACTTTAGGCACCTGCCCTACCCTTCCC  399

seq1  CCAGAGCTAACCACGATGACTAGTGTTTATTTGGGAGCTTTTTTTTTTTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGCTAACCACGATGACTAGTGTTTATTTGGGAGCTTTTTTTTTTTT  449

seq1  TTTTAAAGTTTTCCATATTTGGGTTTATCAGACCTTTTTCTAAAAGAGAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAGTTTTCCATATTTGGGTTTATCAGACCTTTTTCTAAAAGAGAG  499

seq1  AGAGCTCTGGGAGGATTAGAAGCTAAGCAGGGTCTGCCTCCCACATACAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTCTGGGAGGATTAGAAGCTAAGCAGGGTCTGCCTCCCACATACAG  549

seq1  ACTGCTAAGTGATTCAAAGGAAGCAAAATCTGGAATAATCCAGTCTACCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTAAGTGATTCAAAGGAAGCAAAATCTGGAATAATCCAGTCTACCA  599

seq1  CCTGAAGGTCTCCAGGCTGTCCAGCTAGAGCAACGGTTCTCGGCCTTTGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAGGTCTCCAGGCTGTCCAGCTAGAGCAACGGTTCTCGGCCTTTGG  649

seq1  GTCAAGGCCCCCATGGGGGTCGAATGCCTCTTTCACTGGGCTCACCTAGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGGCCCCCATGGGGGTCGAATGCCTCTTTCACTGGGCTCACCTAGG  699

seq1  ACCACCAGAAAACACAGATATCTACCTTATGATTCATAACAGTAGCAAGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCAGAAAACACAGATATCTACCTTATGATTCATAACAGTAGCAAGA  749

seq1  TTACAGTTAGGAAGAAGCAAAAAGAATTTTACCGTTGTGGATCACCACAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGTTAGGAAGAAGCAAAAAGAATTTTACCGTTGTGGATCACCACAA  799

seq1  CAGGAGGAAACTGTATTAAAGGACTGTAGCATTTGGAAGGGTGAGAACCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGAAACTGTATTAAAGGACTGTAGCATTTGGAAGGGTGAGAACCA  849

seq1  CAGGGCTAGAACCTTTCTAAAGCTGAGGTGGAGGGAATTC  889
      ||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTAGAACCTTTCTAAAGCTGAGGTGGAGGGAATTC  889

seq1: chr4_135578577_135578685
seq2: B6Ng01-101G06.g_77_185

seq1  GGACAGCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAACCAAAAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAACCAAAAAAGA  50

seq1  AAAAAAGAAAAGAAAAGAGCCAGGCAGTGGTGATGCATGCCTTTAATCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGAAAAGAAAAGAGCCAGGCAGTGGTGATGCATGCCTTTAATCCC  100

seq1  AGCACTTGG  109
      |||||||||
seq2  AGCACTTGG  109