BAC Information

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BAC

Clone NameB6Ng01-101G23
Chromosome4 (Build37)
Map Location 79,344,188 - 79,462,404
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040026, LOC100040036, LOC667922
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101G23.bB6Ng01-101G23.g
ACCDH910619DH910620
length1,0641,115
definitionDH910619|Mus musculus domesticus DNA, BAC clone: B6Ng01-101G23, 5' end.DH910620|Mus musculus domesticus DNA, BAC clone: B6Ng01-101G23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,461,325 - 79,462,404)(79,344,188 - 79,345,317)
sequence
gaattccaggacagccaaggctacacagagaaactctgtctcaggaaaaa
aaaaattatactaagaattatctgttactattgctggaaaggttataatc
cagaacatttcgaaatttattctttttttttccacatagcatacagattt
gaactttatttttgtaatatggttataaaacgtttatatcaactgttgaa
aatgatgagatgcgttgttgtcacagtgaaaccatttacataaggctttt
catgtcttgagtgccatcttcaactttacaatattggcacccaaagaaat
gcttttctaagtgtactaccagtgtcaacattgggtttctgtttctgtga
agagacttaaaaggaaaataattaattgggctgggcttacatttcagagg
tttagtctattcttaccattatggtgagaagcctggagtgttcaggcaaa
catggtacagcttgatctgcaggcagcagaaggagacagtgtgccaccct
ggatgcagatagcgcatatgagactcagatcccaacctcctcacagtgat
gctcttctttcaccaaggtataccacatgatagtgcactccctgtgtttc
aatgcaaaaaaaaaaaaaaaaaaaaaagcatcgaaacatatgagttcaca
tcagacattctttttcaaacaactccaaaatggaaggggattttagattg
cctcggtgacaattttaaaagagaacttttcagggcttcacatttaactt
agaaatatttaagaaattctcaaaggaaaaatggcttcaaatttagtgat
ctatatatttctaacaaatattcgttcacccttctggtcagagtctgatg
gaagctttatagatatggtaaaattttctcagtctcaacatgagaatttt
ctaaccatgttattattgagtaactttccagatccatattactttgtata
tatctgtctgtttgtttcttaggcattttgtttcagtataaagtgctatt
acaaacagtagttcgtcgagcacagtgtgatgattataattacgagaaaa
aagtttattgtgtt
gaattcagatccagaaagtttaatagtaattactacaaaaatgatcatta
aactgaagttcattttctcttagtttgcccagaacaatcatttatgtgta
tttttgaagttctttatgaacattatagataatttgtcagtctggaaaac
atatggagtttattaacttacagaaatatttaagcaagcaaacatggcaa
aaatataagattttttttgctgtacatattgtctgccatatttgtaatac
ttatgttaaatataaagtcagaagaaatataatgttaaataggaggtaaa
ttatcttgagttttatttacatatgagaattgggataatagaatccagta
ctaagcaaagtattttgtttgtaatgatacaacacagatttgtagtaatt
tgcttatatgattattttcttttcattttaaatctataacatttttctct
tatgtttctctacaaatggtcatgaatacttattgttacacacacaattt
tcacacatatttgacgtttgcactatatgtatcactgataaaacaaacat
gtgagtccaagcataaaatcattcagtcctaaattttactaaaaatattt
tcaattaaaagacaagtatatgtattatcaatataaattgatgataatat
ttttatatctagttttcaaaatagacatgaatactctaacagttgtttca
tatacgactgtatattagagaaaatttggtaaatttttattataaattaa
cagtatactattgaatgctataaaaattttggaaaagacaaaatagtaaa
aacagaagaataattgactttttgctagtccatctacagatcctactgtc
actacacagcttaccttagataccccagtcatgggtccacaggaaaaaat
tgtcaggtacaacatctcatagaaaaactcaggtcctgttgccataagat
attttttctacttaaacaggtatactcttcataccaatgaagatggaatg
gggtcatcactattctttaaatataagcatttattattttatttttgaga
attttatagatgagtttatatttataattattccattcagcccacacttt
ctctccatctctttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_79461325_79462404
seq2: B6Ng01-101G23.b_47_1110 (reverse)

seq1  AACACATATAACCTTTTTTCTCTGTAATTATAAATCATCCACACTGTGCT  50
      |||||| |||| |||||||||| |||||||| |||||| |||||||||||
seq2  AACACA-ATAAACTTTTTTCTC-GTAATTAT-AATCAT-CACACTGTGCT  46

seq1  CGACGAAAACTACTGTTTTGTAATAGCACTTTATACTGAAACCAAAAATG  100
      |||||  |||||||| ||||||||||||||||||||||||||  ||||||
seq2  CGACG--AACTACTG-TTTGTAATAGCACTTTATACTGAAAC--AAAATG  91

seq1  CCCTAAGGAAAACAAACAAGACAGATTATATACAAAGTAATATGGATTCT  150
       ||||||  |||||||| ||||||| |||||||||||||||||||| |||
seq2  -CCTAAG--AAACAAAC-AGACAGA-TATATACAAAGTAATATGGA-TCT  135

seq1  GGAAAGTTACTTCAATAATAACATGGTTAGAAAATTCTCATGTTGAGACT  200
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGTTAC-TCAATAATAACATGGTTAGAAAATTCTCATGTTGAGACT  184

seq1  GAGAAAATTTTACCATATCTATAAAGCTTCCATCAGACTCTGACCAGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAATTTTACCATATCTATAAAGCTTCCATCAGACTCTGACCAGAAG  234

seq1  GGTGAACGAATATTTGTTAGAAATATATAGATCACTAAATTTGAAGCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAACGAATATTTGTTAGAAATATATAGATCACTAAATTTGAAGCCAT  284

seq1  TTTTCCTTTGAGAATTTCTTAAATATTTCTAAGTTAAATGTGAAGCCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTTTGAGAATTTCTTAAATATTTCTAAGTTAAATGTGAAGCCCTG  334

seq1  AAAAGTTCTCTTTTAAAATTGTCACCGAGGCAATCTAAAATCCCCTTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTCTCTTTTAAAATTGTCACCGAGGCAATCTAAAATCCCCTTCCA  384

seq1  TTTTGGAGTTGTTTGAAAAAGAATGTCTGATGTGAACTCATATGTTTCGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGAGTTGTTTGAAAAAGAATGTCTGATGTGAACTCATATGTTTCGA  434

seq1  TGCTTTTTTTTTTTTTTTTTTTTTTGCATTGAAACACAGGGAGTGCACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTTTTTTTTTTTTTTTTTTTGCATTGAAACACAGGGAGTGCACTA  484

seq1  TCATGTGGTATACCTTGGTGAAAGAAGAGCATCACTGTGAGGAGGTTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGGTATACCTTGGTGAAAGAAGAGCATCACTGTGAGGAGGTTGGG  534

seq1  ATCTGAGTCTCATATGCGCTATCTGCATCCAGGGTGGCACACTGTCTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGTCTCATATGCGCTATCTGCATCCAGGGTGGCACACTGTCTCCT  584

seq1  TCTGCTGCCTGCAGATCAAGCTGTACCATGTTTGCCTGAACACTCCAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGCCTGCAGATCAAGCTGTACCATGTTTGCCTGAACACTCCAGGC  634

seq1  TTCTCACCATAATGGTAAGAATAGACTAAACCTCTGAAATGTAAGCCCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACCATAATGGTAAGAATAGACTAAACCTCTGAAATGTAAGCCCAG  684

seq1  CCCAATTAATTATTTTCCTTTTAAGTCTCTTCACAGAAACAGAAACCCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATTAATTATTTTCCTTTTAAGTCTCTTCACAGAAACAGAAACCCAA  734

seq1  TGTTGACACTGGTAGTACACTTAGAAAAGCATTTCTTTGGGTGCCAATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGACACTGGTAGTACACTTAGAAAAGCATTTCTTTGGGTGCCAATAT  784

seq1  TGTAAAGTTGAAGATGGCACTCAAGACATGAAAAGCCTTATGTAAATGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGTTGAAGATGGCACTCAAGACATGAAAAGCCTTATGTAAATGGT  834

seq1  TTCACTGTGACAACAACGCATCTCATCATTTTCAACAGTTGATATAAACG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGTGACAACAACGCATCTCATCATTTTCAACAGTTGATATAAACG  884

seq1  TTTTATAACCATATTACAAAAATAAAGTTCAAATCTGTATGCTATGTGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAACCATATTACAAAAATAAAGTTCAAATCTGTATGCTATGTGGA  934

seq1  AAAAAAAAGAATAAATTTCGAAATGTTCTGGATTATAACCTTTCCAGCAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAGAATAAATTTCGAAATGTTCTGGATTATAACCTTTCCAGCAA  984

seq1  TAGTAACAGATAATTCTTAGTATAATTTTTTTTTTCCTGAGACAGAGTTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAACAGATAATTCTTAGTATAATTTTTTTTTTCCTGAGACAGAGTTT  1034

seq1  CTCTGTGTAGCCTTGGCTGTCCTGGAATTC  1080
      ||||||||||||||||||||||||||||||
seq2  CTCTGTGTAGCCTTGGCTGTCCTGGAATTC  1064

seq1: chr4_79344188_79345317
seq2: B6Ng01-101G23.g_67_1181

seq1  GAATTCAGATCCAGAAAGTTTAATAGTAATTACTACAAAAATGATCATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATCCAGAAAGTTTAATAGTAATTACTACAAAAATGATCATTA  50

seq1  AACTGAAGTTCATTTTCTCTTAGTTTGCCCAGAACAATCATTTATGTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAGTTCATTTTCTCTTAGTTTGCCCAGAACAATCATTTATGTGTA  100

seq1  TTTTTGAAGTTCTTTATGAACATTATAGATAATTTGTCAGTCTGGAAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAAGTTCTTTATGAACATTATAGATAATTTGTCAGTCTGGAAAAC  150

seq1  ATATGGAGTTTATTAACTTACAGAAATATTTAAGCAAGCAAACATGGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGAGTTTATTAACTTACAGAAATATTTAAGCAAGCAAACATGGCAA  200

seq1  AAATATAAGATTTTTTTTGCTGTACATATTGTCTGCCATATTTGTAATAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAAGATTTTTTTTGCTGTACATATTGTCTGCCATATTTGTAATAC  250

seq1  TTATGTTAAATATAAAGTCAGAAGAAATATAATGTTAAATAGGAGGTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTAAATATAAAGTCAGAAGAAATATAATGTTAAATAGGAGGTAAA  300

seq1  TTATCTTGAGTTTTATTTACATATGAGAATTGGGATAATAGAATCCAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTGAGTTTTATTTACATATGAGAATTGGGATAATAGAATCCAGTA  350

seq1  CTAAGCAAAGTATTTTGTTTGTAATGATACAACACAGATTTGTAGTAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCAAAGTATTTTGTTTGTAATGATACAACACAGATTTGTAGTAATT  400

seq1  TGCTTATATGATTATTTTCTTTTCATTTTAAATCTATAACATTTTTCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTATATGATTATTTTCTTTTCATTTTAAATCTATAACATTTTTCTCT  450

seq1  TATGTTTCTCTACAAATGGTCATGAATACTTATTGTTACACACACAATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTCTCTACAAATGGTCATGAATACTTATTGTTACACACACAATTT  500

seq1  TCACACATATTTGACGTTTGCACTATATGTATCACTGATAAAACAAACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACATATTTGACGTTTGCACTATATGTATCACTGATAAAACAAACAT  550

seq1  GTGAGTCCAAGCATAAAATCATTCAGTCCTAAATTTTACTAAAAATATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTCCAAGCATAAAATCATTCAGTCCTAAATTTTACTAAAAATATTT  600

seq1  TCAATTAAAAGACAAGTATATGTATTATCAATATAAATTGATGATAATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTAAAAGACAAGTATATGTATTATCAATATAAATTGATGATAATAT  650

seq1  TTTTATATCTAGTTTTCAAAATAGACATGAATACTCTAACAGTTGTTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATATCTAGTTTTCAAAATAGACATGAATACTCTAACAGTTGTTTCA  700

seq1  TATACGACTGTATATTAGAGAAAATTTGGTAAATTTTTATTATAAATTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACGACTGTATATTAGAGAAAATTTGGTAAATTTTTATTATAAATTAA  750

seq1  CAGTATACTATTGAATGCTATAAAAATTTTGGAAAAGACAAAATAGTAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATACTATTGAATGCTATAAAAATTTTGGAAAAGACAAAATAGTAAA  800

seq1  AACAGAAGAATAATTGACTTTTTGCTAGTCCATCTACAGATCCTACTGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAGAATAATTGACTTTTTGCTAGTCCATCTACAGATCCTACTGTC  850

seq1  ACTACACAGCTTACCTTAGATACCCCAGTCATGGGTCCACAGGAAAAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACACAGCTTACCTTAGATACCCCAGTCATGGGTCCACAGGAAAAAAT  900

seq1  TGTCAGGGTACAACATCTCATAGAAAAAACTCAGGGTCCTGTTTGCCATA  950
      ||||| ||||||||||||||||| ||||||||| ||||||| ||||||||
seq2  TGTCA-GGTACAACATCTCATAG-AAAAACTCA-GGTCCTG-TTGCCATA  946

seq1  AGATATTTTTTCTACTTAAACAGGTATACTCTTCATACCAATGAAGATGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTTTTTCTACTTAAACAGGTATACTCTTCATACCAATGAAGATGG  996

seq1  AATGGGGGTCATCAACTAATTCTTTAAAATATAAAGCATTTATTATTTTA  1050
      ||| ||||||||| ||| ||||||| |||||| |||||||||||||||||
seq2  AAT-GGGGTCATC-ACT-ATTCTTT-AAATAT-AAGCATTTATTATTTTA  1041

seq1  -TTTTGAGAATTTTATAGATGAGTTTTATATATTTTATATATTTATTCAA  1099
       ||||||||||||||||||||||||   ||||||   |||| |||||| |
seq2  TTTTTGAGAATTTTATAGATGAGTT---TATATT---TATAATTATTCCA  1085

seq1  TTTCCAGCCCACACTTTCTCT-CATCTCTTTC  1130
      ||  ||||||||||||||||| ||||||||||
seq2  TT--CAGCCCACACTTTCTCTCCATCTCTTTC  1115