BAC Information

Click to search

BAC

Clone NameB6Ng01-101K07
Chromosome4 (Build37)
Map Location 146,521,119 - 146,587,981
singlet/doubletdoublet
Overlap geneOTTMUSG00000010657, LOC384087, LOC666546
Upstream geneLOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570
Downstream geneLOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101K07.bB6Ng01-101K07.g
ACCDH910763DH910764
length1,0861,024
definitionDH910763|Mus musculus domesticus DNA, BAC clone: B6Ng01-101K07, 5' end.DH910764|Mus musculus domesticus DNA, BAC clone: B6Ng01-101K07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(146,586,889 - 146,587,981)(146,521,119 - 146,522,154)
sequence
gaattcctgtgtacaaatacagatacttccaaggatctaagaggttattt
tagaaaaatattcttgggctggagagatggctcagtggttaagagcactg
attgctcttccgaaggtcctgagttcaaatcccagcaaccacatgatggc
tcacaaccatctgtaatgagatctgacgccctcttctggtgtatctaaaa
gacaactacagtgtacttagatataataataaataaatcttttaaaaaat
agaaaaatattctggaacttataaaattaattaaaacatcaccaaaaccc
ccaggttcatagtatctcaaacttctccaaaatggtaagatatccatgac
agaattgtgagagtggcaggagaaaataaacccctgcccacaccttgttc
ttctcctgcccatttcccagcccaacagctgctctgaccttgaagttaaa
agtactagctgctgaatattctgtaaggcacagcaactgcagcttaagga
ggtaccacaaatactctgactactctcccactatcacttcctgaccatga
tgcagccgagatacattgtcttttatatatgaaggacaggcccccttcaa
tttagaaattgcctttcctctaatggacatgttcaagttcattctatgct
ttttggtaatatacatgaaggtaaggattagtttaatttcttaacaaaag
cttgttgattttcctatgaaagtaacttagcaagatcttacattacaaat
caccattgcactcagaaaactggtcctgcattcctgcaaagctgttagct
cagcttgggtatttaacccctgttttaatccctgagatttaaaacagaca
aatgttacatatgtcctgtcttttcgaaagtttgcctttatgcctgtatg
tatgtatgcttaattctcattgttatttatgccttggcctaacctgggga
aactttcaaaaatatgatacagtatttgtttcatagtttataatgccagg
cctcaaaatcagaaaatacattgttaaacttaaacgcattttaaattcat
gtttgactcttagtttctcatagttcactgacttac
gaattcaactttggactcacacttaattaaatgctctgaggaaaaggctt
ttatttctttccttaactcaactcagatgcattattaaccaccagtatgt
ttaatctactcacatatgaagaatcaattaacttgtgacctttttttttt
tttttttttgcataagtacaatatgggaaaaactaaaagtcaccacaatg
ggaaactagtagccctgccatctgaaaggtgttcatgggctttgaaccct
gttctttaaagtcagacccccaggtttgggcttgtgcttctgagctctcg
cctccatgctgagctagaatccattttaacctctcataatcatcacaaca
ggttttgaacctaagaggtcacatgagaatcctggaactcattacaatca
tgaaaagagttgacttcctagcaatagtctaatgagacttgggtaaatct
cgagtcttctttccccagcttatactgatatgcatgggtgtcatagagtg
tttcagtgaacaatcaggaaactatttatcaacaaacagtgcagtgtgta
ttgtaattttgttctagtttttctttctttccttcttacttttttttctt
cttcttcttttttttttttttcacttttttgacaaaaatctagacagttt
tccaaaggagtttctcttaattgcctcacccttcaagcagtaaataatat
tgtgccttgacttaatatcattttaattcaccattttctttgactgaggt
acccacctcctctaccttttctttaagtctgataatctgtctcccacagt
ttctctatgtttttgtttttgtttttttaacctcactacattttcttttc
aggtggtttttttttgttttttgtttttggtttgtttgtttttggcattc
ctgagcactaattgaactcaatttatattttatagtgtctcaggcatctg
gtattattttcttgttcatggttcattttgttcttgtctgagtggattca
catggttacaaacctttaatgtcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146586889_146587981
seq2: B6Ng01-101K07.b_48_1133 (reverse)

seq1  GTAATGTCAGTGGACTATGAGAAACTAAGAGTCAAACATGAATTTTAATA  50
      |||| ||||||| ||||||||||||||||||||||||||||| ||||| |
seq2  GTAA-GTCAGTGAACTATGAGAAACTAAGAGTCAAACATGAA-TTTAAAA  48

seq1  TGCGTTTTAAGTTTAAACAATGGTATTTTCTGATTTTGAGGCCTTGGCAT  100
      |||| ||||||||| |||||| ||||||||||||||||||||| ||||||
seq2  TGCG-TTTAAGTTT-AACAAT-GTATTTTCTGATTTTGAGGCC-TGGCAT  94

seq1  TATAAACTAATGAAACAAATACTGTATCATATTTTTGAAAGTTTCCCCAG  150
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACT-ATGAAACAAATACTGTATCATATTTTTGAAAGTTTCCCCAG  143

seq1  GTTAGGCCAAGGCATAAATAACAATGAGAATTAAGCATACATACATACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGCCAAGGCATAAATAACAATGAGAATTAAGCATACATACATACAG  193

seq1  GCATAAAGGCAAACTTTCGAAAAGACAGGACATATGTAACATTTGTCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAAAGGCAAACTTTCGAAAAGACAGGACATATGTAACATTTGTCTGT  243

seq1  TTTAAATCTCAGGGATTAAAACAGGGGTTAAATACCCAAGCTGAGCTAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATCTCAGGGATTAAAACAGGGGTTAAATACCCAAGCTGAGCTAAC  293

seq1  AGCTTTGCAGGAATGCAGGACCAGTTTTCTGAGTGCAATGGTGATTTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGCAGGAATGCAGGACCAGTTTTCTGAGTGCAATGGTGATTTGTA  343

seq1  ATGTAAGATCTTGCTAAGTTACTTTCATAGGAAAATCAACAAGCTTTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAGATCTTGCTAAGTTACTTTCATAGGAAAATCAACAAGCTTTTGT  393

seq1  TAAGAAATTAAACTAATCCTTACCTTCATGTATATTACCAAAAAGCATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAATTAAACTAATCCTTACCTTCATGTATATTACCAAAAAGCATAG  443

seq1  AATGAACTTGAACATGTCCATTAGAGGAAAGGCAATTTCTAAATTGAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACTTGAACATGTCCATTAGAGGAAAGGCAATTTCTAAATTGAAGG  493

seq1  GGGCCTGTCCTTCATATATAAAAGACAATGTATCTCGGCTGCATCATGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTGTCCTTCATATATAAAAGACAATGTATCTCGGCTGCATCATGGT  543

seq1  CAGGAAGTGATAGTGGGAGAGTAGTCAGAGTATTTGTGGTACCTCCTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGTGATAGTGGGAGAGTAGTCAGAGTATTTGTGGTACCTCCTTAA  593

seq1  GCTGCAGTTGCTGTGCCTTACAGAATATTCAGCAGCTAGTACTTTCAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GCTGCAGTTGCTGTGCCTTACAGAATATTCAGCAGCTAGTACTTTTAACT  643

seq1  TCAAGGTCAGAGCAGCTGTTGGGCTGGGAAATGGGCAGGAGAAGAACAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGTCAGAGCAGCTGTTGGGCTGGGAAATGGGCAGGAGAAGAACAAG  693

seq1  GTGTGGGCAGGGGTTTATTTTCTCCTGCCACTCTCACAATTCTGTCATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGGCAGGGGTTTATTTTCTCCTGCCACTCTCACAATTCTGTCATGG  743

seq1  ATATCTTACCATTTTGGAGAAGTTTGAGATACTATGAACCTGGGGGTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTTACCATTTTGGAGAAGTTTGAGATACTATGAACCTGGGGGTTTT  793

seq1  GGTGATGTTTTAATTAATTTTATAAGTTCCAGAATATTTTTCTATTTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATGTTTTAATTAATTTTATAAGTTCCAGAATATTTTTCTATTTTTT  843

seq1  AAAAGATTTATTTATTATTATATCTAAGTACACTGTAGTTGTCTTTTAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATTTATTTATTATTATATCTAAGTACACTGTAGTTGTCTTTTAGA  893

seq1  TACACCAGAAGAGGGCATCAGATCTCATTACAGATGGTTGTGAGCCATCA  950
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TACACCAGAAGAGGGCGTCAGATCTCATTACAGATGGTTGTGAGCCATCA  943

seq1  TGTGGTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAATCAGTGCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAATCAGTGCT  993

seq1  CTTAACCACTGAGCCATCTCTCCAGCCCAAGAATATTTTTCTAAAATAAC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACCACTGAGCCATCTCTCCAGCCCAAGAATATTTTTCTAAAATAAC  1043

seq1  CTCTTAGATCCTTGGAAGTATCTGTATTTGTACACAGGAATTC  1093
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAGATCCTTGGAAGTATCTGTATTTGTACACAGGAATTC  1086

seq1: chr4_146521119_146522154
seq2: B6Ng01-101K07.g_69_1092

seq1  GAATTCAACTTTGGACTCACACTTAATTAAATGCTCTGAGGAAAAGGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTTTGGACTCACACTTAATTAAATGCTCTGAGGAAAAGGCTT  50

seq1  TTATTTCTTTCCTTAACTCAACTCAGATGCATTATTAACCACCAGTATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCTTTCCTTAACTCAACTCAGATGCATTATTAACCACCAGTATGT  100

seq1  TTAATCTACTCACATATGAAGAATCAATTAACTTGTGACCTTTTTTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||     |||||
seq2  TTAATCTACTCACATATGAAGAATCAATTAACTTGTGACC-----TTTTT  145

seq1  TTTTTTTTTTTTTTGCATAAGTACAATATGGGAAAAACTAAAAGTCACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTGCATAAGTACAATATGGGAAAAACTAAAAGTCACCA  195

seq1  CAATGGGAAACTAGTAGCCCTGCCATCTGAAAGGTGTTCATGGGCTTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGGAAACTAGTAGCCCTGCCATCTGAAAGGTGTTCATGGGCTTTGA  245

seq1  ACCCTGTTCTTTAAAGTCAGACCCCCAGGTTTGGGCTTGTGCTTCTGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTTCTTTAAAGTCAGACCCCCAGGTTTGGGCTTGTGCTTCTGAGC  295

seq1  TCTCGCCTCCATGCTGAGCTAGAATCCATTTTAACCTCTCATAATCATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGCCTCCATGCTGAGCTAGAATCCATTTTAACCTCTCATAATCATCA  345

seq1  CAACAGGTTTTGAACCTAAGAGGTCACATGAGAATCCTGGAACTCATTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGGTTTTGAACCTAAGAGGTCACATGAGAATCCTGGAACTCATTAC  395

seq1  AATCATGAAAAGAGTTGACTTCCTAGCAATAGTCTAATGAGACTTGGGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATGAAAAGAGTTGACTTCCTAGCAATAGTCTAATGAGACTTGGGTA  445

seq1  AATCTCGAGTCTTCTTTCCCCAGCTTATACTGATATGCATGGGTGTCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCGAGTCTTCTTTCCCCAGCTTATACTGATATGCATGGGTGTCATA  495

seq1  GAGTGTTTCAGTGAACAATCAGGAAACTATTTATCAACAAACAGTGCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTTTCAGTGAACAATCAGGAAACTATTTATCAACAAACAGTGCAGT  545

seq1  GTGTATTGTAATTTTGTTCTAGTTTTTCTTTCTTTCCTTCTTACTTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATTGTAATTTTGTTCTAGTTTTTCTTTCTTTCCTTCTTACTTTTTT  595

seq1  TTCTTCTTCTTC---TTTTTTTTTTTCACTTTTTTGACAAAAATCTAGAC  647
      ||||||||||||   |||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTCTTCTTTTTTTTTTTTTTCACTTTTTTGACAAAAATCTAGAC  645

seq1  AGTTTTCCAAAGGAGTTTCTCTTAATTGCCTCACCCTTCAAGCAGTAAAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCCAAAGGAGTTTCTCTTAATTGCCTCACCCTTCAAGCAGTAAAT  695

seq1  AATATTGTGCCTTGACTTAATATCATTTTAATTCACCATTTTCTTTGACT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGTGCCTTGACTTAATATCATTTTAATTCACCATTTTCTTTGACT  745

seq1  GAGGTACCCACCTCCTCTACCTTTTCTTTAAGTCTGATAATCTGTCTCCC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTACCCACCTCCTCTACCTTTTCTTTAAGTCTGATAATCTGTCTCCC  795

seq1  ACAGTTTCTCTATGTTTTTGTTTTTGTTTTTTTTAACCTCACTACATTTT  847
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ACAGTTTCTCTATGTTTTTGTTTTTG-TTTTTTTAACCTCACTACATTTT  844

seq1  CTTTTCAGGTGTTTTTTTGTTTGTTTTTTTGTTTTTTGGTTTTGTTTTGT  897
      ||||||||||| |||||| |||| ||||||||||||  | |||||||   
seq2  CTTTTCAGGTGGTTTTTT-TTTG-TTTTTTGTTTTT--GGTTTGTTT--G  888

seq1  TTTTTGGCATTCCTGAGCACCTATTGAACTCAATTTTAATATTTTATAGT  947
      ||||||||||||||||||||  ||||||||||||||  ||||||||||||
seq2  TTTTTGGCATTCCTGAGCACTAATTGAACTCAATTT--ATATTTTATAGT  936

seq1  GTCCTCAGGCATCTGGTATTATTTTCTTGTTCATGGTTCATTTTGTTCCT  997
      || ||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GT-CTCAGGCATCTGGTATTATTTTCTTGTTCATGGTTCATTTTGTTCTT  985

seq1  GTCTGAGTGGATTCACATGGTTTACAAA-CTTTAATGTCC  1036
      |||||||||||||||||||| ||||||| |||||||||||
seq2  GTCTGAGTGGATTCACATGG-TTACAAACCTTTAATGTCC  1024