BAC Information

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BAC

Clone NameB6Ng01-101N24
Chromosome4 (Build37)
Map Location 92,636,398 - 92,662,856
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC664886, 1700011H22Rik, LOC68280
Downstream geneLOC620269, LOC384125, Tusc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101N24.bB6Ng01-101N24.g
ACCDH910928DH910929
length1,0981,078
definitionDH910928|Mus musculus domesticus DNA, BAC clone: B6Ng01-101N24, 5' end.DH910929|Mus musculus domesticus DNA, BAC clone: B6Ng01-101N24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,636,398 - 92,637,496)(92,661,770 - 92,662,856)
sequence
gaattcaggaggctctttggtggtaatatgatccatgaatatcaacatag
acctctgctgcttcatgatcccagacccaacacaggccaggacttcacca
tcagcttaggtagtatggaaggctgctcctatcaggctgttcctctctac
cctcctgtctctagttctccctttcttcatagtgctcaaacagttctgat
cctctctttctcccatctctccatcacatacatgcatattcatatcttag
tgtctctagtatgggcagtccatatggtgggaaaacctctggtgtcttct
gcacacccatgttccccaagcctctcagtcatttgattgttgatcttgaa
ttcacgcagagatgcctcactcacttgttttaatgaagcatttttctctc
atgcactgaaggatgccaagaacagattgcttttggacttagtttccata
tgctcagtcttcaaagtaaagacaaaagctgttaactcagtttcagaaac
tgtgctagatggctcttgttttcaaacatcgttcttttcacagagaagat
aagaagaacctgaagtccagctgtggtttttttcagacacactctaactg
aacagagattttagttgagagaagtgtttcttttgactcaattccttgag
gagcaaatgggtattgactgtcaaaaatacagttgttcggatagtcaagg
aggggctcttgcctttgtaaccagacatatcatgatagaagctacatgtt
ctataggtaatcagtagcatacttgtagagtctgtatttttctcaacatg
tttctttaaaactgagtgtataattcctgctttttgaattaggaggtttc
tgtatcatgggtgtcagtttgactttggggtttaagaacactctagagtt
atccaggaaccaacaatttggaatcagttgaagaacattttttcaggaaa
gtgctgataatctaggtggcactgactatgaccagggtcgcttccacaag
tctgagctacagcttcaaggtatcacatctgcacgtagcagacatgtcag
cttcaaaatcactgtgttaatcatttccacttatgtttacatgccaat
gaattcaaaaattaaataaaaacagaaaataatccaattactaaatatga
aaatgagatgagtagataccaaatgaagaagcacaaatttcttagaaata
cacacagaaaaatgttattcgttttagttactaagggaatgcaaaccaaa
attacattagcacaccattccattccaagcaggagtatattatttggaaa
acaaaatgatatcaaatgttgtaaaatataaaggaaagatccataaaccg
ttggtgaaaatgagaatatgtccaatcagagaccacataagtatataaaa
ctaacctgataaaataaaaatagactcatgccatcattaggatatatgta
tcagccttcatgatgaggacacatatttagcaggatgaaagtcagtacac
tatagatatacctttagagttagggtctgctcttcaatatctccaatgga
atcagtttttaaatcttggtcctcacatatgcaagtgaaataaattgtgg
ctcttatacatagtaagtcaacttatacataaataagaagagttatggaa
aattacttaactggagatcatcatattaagtgaaacatgtggatctcata
gtaacaaataacatactttacctcatattttatgattaagaaaaatacat
gaaaacattggaggtattagaagagttgtggagagggagttaaagagcag
gagaatatgatcaaattatgtttaatgcatgcatttctctgtatattaat
atatgctaataaaactctgactgaataaaagtaaatatcacttgtcactt
gagtttatttagtgaattatatattaaaggatatttcttcttttattgat
tgtgcttttgatatttttattgggtatttatttaatttacatttccaatg
ctatcccaaaagtcccccaaattgctccctcacccactccccaaccctcc
actcccacttcttggccctggcgttccctgtactgagcatataagtttgc
acacccatgggcctctatttcagtgatgcgactaggcatcttctgatcaa
tgcagctagagacctgagctctggaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_92636398_92637496
seq2: B6Ng01-101N24.b_48_1145

seq1  GAATTCAGGAGGCTCTTTGGTGGTAATATGATCCATGAATATCAACATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAGGCTCTTTGGTGGTAATATGATCCATGAATATCAACATAG  50

seq1  ACCTCTGCTGCTTCATGATCCCAGACCCAACACAGGCCAGGACTTCACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTGCTGCTTCATGATCCCAGACCCAACACAGGCCAGGACTTCACCA  100

seq1  TCAGCTTAGGTAGTATGGAAGGCTGCTCCTATCAGGCTGTTCCTCTCTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTAGGTAGTATGGAAGGCTGCTCCTATCAGGCTGTTCCTCTCTAC  150

seq1  CCTCCTGTCTCTAGTTCTCCCTTTCTTCATAGTGCTCAAACAGTTCTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGTCTCTAGTTCTCCCTTTCTTCATAGTGCTCAAACAGTTCTGAT  200

seq1  CCTCTCTTTCTCCCATCTCTCCATCACATACATGCATATTCATATCTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTTTCTCCCATCTCTCCATCACATACATGCATATTCATATCTTAG  250

seq1  TGTCTCTAGTATGGGCAGTCCATATGGTGGGAAAACCTCTGGTGTCTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTAGTATGGGCAGTCCATATGGTGGGAAAACCTCTGGTGTCTTCT  300

seq1  GCACACCCATGTTCCCCAAGCCTCTCAGTCATTTGATTGTTGATCTTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACCCATGTTCCCCAAGCCTCTCAGTCATTTGATTGTTGATCTTGAA  350

seq1  TTCACGCAGAGATGCCTCACTCACTTGTTTTAATGAAGCATTTTTCTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACGCAGAGATGCCTCACTCACTTGTTTTAATGAAGCATTTTTCTCTC  400

seq1  ATGCACTGAAGGATGCCAAGAACAGATTGCTTTTGGACTTAGTTTCCATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACTGAAGGATGCCAAGAACAGATTGCTTTTGGACTTAGTTTCCATA  450

seq1  TGCTCAGTCTTCAAAGTAAAGACAAAAGCTGTTAACTCAGTTTCAGAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGTCTTCAAAGTAAAGACAAAAGCTGTTAACTCAGTTTCAGAAAC  500

seq1  TGTGCTAGATGGCTCTTGTTTTCAAACATCGTTCTTTTCACAGAGAAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTAGATGGCTCTTGTTTTCAAACATCGTTCTTTTCACAGAGAAGAT  550

seq1  AAGAAGAACCTGAAGTCCAGCTGTGGTTTTTTTCAGACACACTCTAACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAACCTGAAGTCCAGCTGTGGTTTTTTTCAGACACACTCTAACTG  600

seq1  AACAGAGATTTTAGTTGAGAGAAGTGTTTCTTTTGACTCAATTCCTTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGATTTTAGTTGAGAGAAGTGTTTCTTTTGACTCAATTCCTTGAG  650

seq1  GAGCAAATGGGTATTGACTGTCAAAAATACAGTTGTTCGGATAGTCAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAATGGGTATTGACTGTCAAAAATACAGTTGTTCGGATAGTCAAGG  700

seq1  AGGGGCTCTTGCCTTTGTAACCAGACATATCATGATAGAAGCTACATGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCTCTTGCCTTTGTAACCAGACATATCATGATAGAAGCTACATGTT  750

seq1  CTATAGGTAATCAGTAGCATACTTGTAGAGTCTGTATTTTTCTCAACATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGGTAATCAGTAGCATACTTGTAGAGTCTGTATTTTTCTCAACATG  800

seq1  TTTCTTTAAAACTGAGTGTATAATTCCTGCTTTTTGAATTAGGAGGTTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTAAAACTGAGTGTATAATTCCTGCTTTTTGAATTAGGAGGTTTC  850

seq1  TGTATCATGGGTGTCAGTTTGACTTTGGGTTTAAGGAACACTCTAGAGTT  900
      ||||||||||||||||||||||||||||| || | |||||||||||||||
seq2  TGTATCATGGGTGTCAGTTTGACTTTGGGGTTTAAGAACACTCTAGAGTT  900

seq1  ATCCA-GAACCAACAA-TTGGAATCAG-TGAAG-ACATGTTTCCAGGAAA  946
      ||||| |||||||||| |||||||||| ||||| |||| ||| |||||||
seq2  ATCCAGGAACCAACAATTTGGAATCAGTTGAAGAACATTTTTTCAGGAAA  950

seq1  GTGCTGATAATCTAGGTGGCACTGACTATGACCAGGGTCGCTTTCCACCA  996
      ||||||||||||||||||||||||||||||||||||||||| ||||| ||
seq2  GTGCTGATAATCTAGGTGGCACTGACTATGACCAGGGTCGC-TTCCA-CA  998

seq1  AGTCCTGAGCTACAGCTTCAAGGTATCACATCTGCCACGTAGCAGACATG  1046
      ||| |||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGT-CTGAGCTACAGCTTCAAGGTATCACATCTG-CACGTAGCAGACATG  1046

seq1  TCCAGCTGCAAAATCACTGTGTTATTCATTTCCACTTATGTTTACATGCC  1096
      | ||||| |||||||||||||||| |||||||||||||||||||||||||
seq2  T-CAGCTTCAAAATCACTGTGTTAATCATTTCCACTTATGTTTACATGCC  1095

seq1  AAT  1099
      |||
seq2  AAT  1098

seq1: chr4_92661770_92662856
seq2: B6Ng01-101N24.g_67_1144 (reverse)

seq1  CCCTCCAGAGCTCATGTCTCTAGCTGCATATGAATCAGAAGATGGCCTAG  50
      |||||||||||||| |||||||||||||| || |||||||||| ||||||
seq2  CCCTCCAGAGCTCAGGTCTCTAGCTGCAT-TG-ATCAGAAGAT-GCCTAG  47

seq1  TCGGCCATCACTGGAAATAGAGGCCCATGGGTTGTGCAAACTTTATATGC  100
      |||  ||||||| |||||||||||||||||| ||||||||| ||||||| 
seq2  TCG--CATCACT-GAAATAGAGGCCCATGGG-TGTGCAAAC-TTATATG-  91

seq1  CTCAGTACAGGGGAACGCCAGGGCCAAGAAGTGGGAGTGGGAGGGTGGGG  150
      ||||||||| |||||||||||||||||||||||||||| ||||||| |||
seq2  CTCAGTACA-GGGAACGCCAGGGCCAAGAAGTGGGAGT-GGAGGGTTGGG  139

seq1  GAGTGGGTGAGGGAGC-ATTTGGGGGACTTTTGGGATAGCATTGGAAATG  199
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GAGTGGGTGAGGGAGCAATTTGGGGGACTTTTGGGATAGCATTGGAAATG  189

seq1  TAAATTAAATAAATACCCAATAAAAATATCAAAAGCACAATCAATAAAAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAAATAAATACCCAATAAAAATATCAAAAGCACAATCAATAAAAG  239

seq1  AAGAAATATCC-TTAATATATAATTCACTAAATAAACTCAAGTGACAAGT  298
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATATCCTTTAATATATAATTCACTAAATAAACTCAAGTGACAAGT  289

seq1  GATATTTACTTTTATTCAGTCAGAGTTTTATTAGCATATATTAATATACA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTACTTTTATTCAGTCAGAGTTTTATTAGCATATATTAATATACA  339

seq1  GAGAAATGCATGCATTAAACATAATTTGATCATATTCTCCTGCTCTTTAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAATGCATGCATTAAACATAATTTGATCATATTCTCCTGCTCTTTAA  389

seq1  CTCCCTCTCCACAACTCTTCTAATACCTCCAATGTTTTCATGTATTTTTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCTCCACAACTCTTCTAATACCTCCAATGTTTTCATGTATTTTTC  439

seq1  TTAATCATAAAATATGAGGTAAAGTATGTTATTTGTTACTATGAGATCCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCATAAAATATGAGGTAAAGTATGTTATTTGTTACTATGAGATCCA  489

seq1  CATGTTTCACTTAATATGATGATCTCCAGTTAAGTAATTTTCCATAACTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTCACTTAATATGATGATCTCCAGTTAAGTAATTTTCCATAACTC  539

seq1  TTCTTATTTATGTATAAGTTGACTTACTATGTATAAGAGCCACAATTTAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATTTATGTATAAGTTGACTTACTATGTATAAGAGCCACAATTTAT  589

seq1  TTCACTTGCATATGTGAGGACCAAGATTTAAAAACTGATTCCATTGGAGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTGCATATGTGAGGACCAAGATTTAAAAACTGATTCCATTGGAGA  639

seq1  TATTGAAGAGCAGACCCTAACTCTAAAGGTATATCTATAGTGTACTGACT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAAGAGCAGACCCTAACTCTAAAGGTATATCTATAGTGTACTGACT  689

seq1  TTCATCCTGCTAAATATGTGTCCTCATCATGAAGGCTGATACATATATCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCCTGCTAAATATGTGTCCTCATCATGAAGGCTGATACATATATCC  739

seq1  TAATGATGGCATGAGTCTATTTTTATTTTATCAGGTTAGTTTTATATACT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATGGCATGAGTCTATTTTTATTTTATCAGGTTAGTTTTATATACT  789

seq1  TATGTGGTCTCTGATTGGACATATTCTCATTTTCACCAACGGTTTATGGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGGTCTCTGATTGGACATATTCTCATTTTCACCAACGGTTTATGGA  839

seq1  TCTTTCCTTTATATTTTACAACATTTGATATCATTTTGTTTTCCAAATAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCTTTATATTTTACAACATTTGATATCATTTTGTTTTCCAAATAA  889

seq1  TATACTCCTGCTTGGAATGGAATGGTGTGCTAATGTAATTTTGGTTTGCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTCCTGCTTGGAATGGAATGGTGTGCTAATGTAATTTTGGTTTGCA  939

seq1  TTCCCTTAGTAACTAAAACGAATAACATTTTTCTGTGTGTATTTCTAAGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTAGTAACTAAAACGAATAACATTTTTCTGTGTGTATTTCTAAGA  989

seq1  AATTTGTGCTTCTTCATTTGGTATCTACTCATCTCATTTTCATATTTAGT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTGCTTCTTCATTTGGTATCTACTCATCTCATTTTCATATTTAGT  1039

seq1  AATTGGATTATTTTCTGTTTTTATTTAATTTTTGAATTC  1087
      |||||||||||||||||||||||||||||||||||||||
seq2  AATTGGATTATTTTCTGTTTTTATTTAATTTTTGAATTC  1078