BAC Information

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BAC

Clone NameB6Ng01-102B11
Chromosome4 (Build37)
Map Location 16,255,984 - 16,257,125
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040095, LOC633695, Calb1, Decr1, Nbn, Osgin2, Ripk2, LOC667150
Downstream geneLOC383994, LOC100040154, LOC667212, LOC100040173
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102B11.bB6Ng01-102B11.g
ACCDH911080DH911081
length1,2111,134
definitionDH911080|Mus musculus domesticus DNA, BAC clone: B6Ng01-102B11, 5' end.DH911081|Mus musculus domesticus DNA, BAC clone: B6Ng01-102B11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattggcacaggaaaacacttttttaatagtacacttctgtctta
tggtttttattgctttgaagagacactacaatcatggccggtcttataaa
ggaaaacatgtaataggggccggcttacagtcagaggtttagtccttcct
gcctggcatcatggcaggaagcatggtagcacataggcagactcggtgct
ggagatgtagttgggagttctacatctggatcttcacacagcaggaagag
aaagagaggagagagagagagagagagagagagagagagagagagagaga
gagagagagagagagagagagagagagtcttaatcatttgaaatcccaaa
gcccatccccagtgatatagtttccctaactgaccatgcctactccaaca
agaccccttaagagcctatcggggtcatttctgttcaattaccagaactg
atcgcacaggcaccaggaccaacaattcagaaaaacgacctcatgcagct
gaaaagcttgtatggttaaggacaccatcatttgggcaaagcatcaggct
acaaatggaaaaagatctttactaattgcacatctgatgcaggtttagta
actaaactatgtaaagaactaaaaatactggctatcaagaaaagatacaa
cccagttaaaaaccaggtgaaaactaagtagggggttctcaaacataaat
gagagaaacacttgagatgttccacttccttattcatcagggaagtgaaa
attaaaaccactttgacatttcatttttatgctagttagaatggccagga
tcaatgaaggaagtgacagatcatgctggcaaggatctagggagagagaa
aacttactctttgctgctggggggtacaaatttgtacagctactatggga
aatcagtgtggtagttcctcaagaaactgggaatagttcttcttcaagat
ccagctatgtcattcttgagcatataccagaagaactctaaatcctctac
ctcagtgcttccaaccttcctgataggaaacttctaatacagtcctcatg
tgtggttaccccaactttcatgctactaaactgtaatttgctactggtat
aaatgaatgtatctgtgcttctgaaagattaggtgacagctggaagggac
ttcagctcaagactgaaccaagttgaaacgtctgttaatgcaggaagaat
caaaataatca
gaattcattgattgaggaataaattaggcaaacacgtaaagaaatcctgt
gtagcctgtaattagaacaaaaagaacaaggaagaaaaactaaatggaac
tgatatagttcacatcaaaagataacaggaaggccatcacatggatgtaa
acagagaagtaacaaaggctgaggtatcattctccaaattacaatttgga
gaaaggtaagttgagataaggtcctgttgtgtagcacaggcttcctcaaa
cccaccatccttctgcctcagtgttctgaaggctggaatcagagaagtat
accagcatgcccaactctatttttgttttctttatttttgatattgtaat
ttaattactacattccttccctttcttccttcccagcccttgcatatgcc
tcaccctgcccttcttcaaagtcatcacctctttttatcaattcttattg
catgaaaacatgtatttgtgcatacatattattcctcaatataaccagtt
gaatccatgttatgttatttgtatgtgtgtgttcagggctgacagtttgt
aatctgacaaccaatttgtatgttcttctttggggagaaccacctctttc
acacccagctttcctcagttgtctgtaattcttttgtaagtttgaggctc
tgtgggcattttcctgtttgacatgtctcaacctcagttgtcactaacaa
taccttgttcatggtcctgaaattttgaagagatggccaaagtttggaaa
tagcatccacctgctgatacttcttcctatcaagtcaagtgtttctgtat
tatactttatatactatctatgagcacagatttattaagtcaagcattca
taattatataaattatacgtactgcttacactgtatataaacaataattt
cccaaaagtagaatcaagacatccttaaggaatttcttaagtttgtaaag
aagtagagctgttcttttatcagctctctacatcctgagatcctctatat
ggtatctgaagaatataaaggaaatttgcataacactaaataaccacatg
tacaggagactttgatagctttataaaattgtatttacctctaaaaaaat
acatatcccttacctgagaagaaaaataaaagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_16255984_16257125
seq2: B6Ng01-102B11.g_69_1202 (reverse)

seq1  TCCTTTTATTTTTCTTCTCAGGTAATGATAATGTATTTTTTTTAGAGGGT  50
      ||||||||||||||||||||||||| |   ||||| |||||||||| |||
seq2  TCCTTTTATTTTTCTTCTCAGGTAAGGGATATGTA-TTTTTTTAGA-GGT  48

seq1  AAATACATTTTTATAAAGCTATCAAAGTCTCTTGTACATGTGTTTATTTA  100
      ||||||| ||||||||||||||||||||||| |||||||||| |||||||
seq2  AAATACAATTTTATAAAGCTATCAAAGTCTCCTGTACATGTGGTTATTTA  98

seq1  GTGTTATTGCAAATTTTCTTTATATTCTTTCAGATTAACAATATAGAGGA  150
      |||||| ||||||||| |||||||||| |||||||  || ||||||||||
seq2  GTGTTA-TGCAAATTTCCTTTATATTC-TTCAGAT--ACCATATAGAGGA  144

seq1  TTCTCAGGATGTAGAGAGCTGATAAAAGAACAGCTCTACTTCTTTACAAA  200
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TCTCAGGATGTAGAGAGCTGATAAAAGAACAGCTCTACTTCTTTACAAA  193

seq1  CTTAAGAAATTCCCTTAAGGATGTCTTGATTCTACTTTTGGGAAATTATT  250
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGAAATT-CCTTAAGGATGTCTTGATTCTACTTTTGGGAAATTATT  242

seq1  GTTTATATACAGTGTAAGCAGTACGTATAATTTATATAATTATGAATGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATATACAGTGTAAGCAGTACGTATAATTTATATAATTATGAATGCT  292

seq1  TGACTTAATAAATCTGTGCTCATAGATAGTATATAAAGTATAATACAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTAATAAATCTGTGCTCATAGATAGTATATAAAGTATAATACAGAA  342

seq1  ACACTTGACTTGATAGGAAGAAGTATCAGCAGGTGGATGCTATTTCCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTGACTTGATAGGAAGAAGTATCAGCAGGTGGATGCTATTTCCAAA  392

seq1  CTTTGGCCATCTCTTCAAAATTTCAGGACCATGAACAAGGTATTGTTAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGCCATCTCTTCAAAATTTCAGGACCATGAACAAGGTATTGTTAGT  442

seq1  GACAACTGAGGTTGAGACATGTCAAACAGGAAAATGCCCACAGAGCCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACTGAGGTTGAGACATGTCAAACAGGAAAATGCCCACAGAGCCTCA  492

seq1  AACTTACAAAAGAATTACAGACAACTGAGGAAAGCTGGGTGTGAAAGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTACAAAAGAATTACAGACAACTGAGGAAAGCTGGGTGTGAAAGAGG  542

seq1  TGGTTCTCCCCAAAGAAGAACATACAAATTGGTTGTCAGATTACAAACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCTCCCCAAAGAAGAACATACAAATTGGTTGTCAGATTACAAACTG  592

seq1  TCAGCCCTGAACACACACATACAAATAACATAACATGGATTCAACTGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCCTGAACACACACATACAAATAACATAACATGGATTCAACTGGTT  642

seq1  ATATTGAGGAATAATATGTATGCACAAATACATGTTTTCATGCAATAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGAGGAATAATATGTATGCACAAATACATGTTTTCATGCAATAAGA  692

seq1  ATTGATAAAAAGAGGTGATGACTTTGAAGAAGGGCAGGGTGAGGCATATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATAAAAAGAGGTGATGACTTTGAAGAAGGGCAGGGTGAGGCATATG  742

seq1  CAAGGGCTGGGAAGGAAGAAAGGGAAGGAATGTAGTAATTAAATTACAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGCTGGGAAGGAAGAAAGGGAAGGAATGTAGTAATTAAATTACAAT  792

seq1  ATCAAAAATAAAGAAAACAAAAATAGAGTTGGGCATGCTGGTATACTTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAAATAAAGAAAACAAAAATAGAGTTGGGCATGCTGGTATACTTCT  842

seq1  CTGATTCCAGCCTTCAGAACACTGAGGCAGAAGGATGGTGGGTTTGAGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTCCAGCCTTCAGAACACTGAGGCAGAAGGATGGTGGGTTTGAGGA  892

seq1  AGCCTGTGCTACACAACAGGACCTTATCTCAACTTACCTTTCTCCAAATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGTGCTACACAACAGGACCTTATCTCAACTTACCTTTCTCCAAATT  942

seq1  GTAATTTGGAGAATGATACCTCAGCCTTTGTTACTTCTCTGTTTACATCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTTGGAGAATGATACCTCAGCCTTTGTTACTTCTCTGTTTACATCC  992

seq1  ATGTGATGGCCTTCCTGTTATCTTTTGATGTGAACTATATCAGTTCCATT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGATGGCCTTCCTGTTATCTTTTGATGTGAACTATATCAGTTCCATT  1042

seq1  TAGTTTTTCTTCCTTGTTCTTTTTGTTCTAATTACAGGCTACACAGGATT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTTCTTCCTTGTTCTTTTTGTTCTAATTACAGGCTACACAGGATT  1092

seq1  TCTTTACGTGTTTGCCTAATTTATTCCTCAATCAATGAATTC  1142
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACGTGTTTGCCTAATTTATTCCTCAATCAATGAATTC  1134