BAC Information

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BAC

Clone NameB6Ng01-102L02
Chromosome4 (Build37)
Map Location 137,171,795 - 137,294,770
singlet/doubletdoublet
Overlap geneUsp48, Rap1gap
Upstream geneBC029684, Ephb2, C1qb, C1qc, C1qa, Epha8, Zbtb40, Wnt4, Cdc42, LOC665533, LOC242711, Ela3, 1700013G24Rik, Hspg2, Ldlrad2
Downstream geneAkp2, Ece1, LOC100040558, Eif4g3, Hp1bp3, Kif17, Ddost, Pink1, Cda, LOC625638, LOC625646, 0610009K11Rik, Camk2n1, LOC100040618, 4931403E03Rik, Ubxd3, Pla2g2c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102L02.bB6Ng01-102L02.g
ACCDH911509DH911510
length1,1671,008
definitionDH911509|Mus musculus domesticus DNA, BAC clone: B6Ng01-102L02, 5' end.DH911510|Mus musculus domesticus DNA, BAC clone: B6Ng01-102L02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(137,171,795 - 137,172,981)(137,293,764 - 137,294,770)
sequence
gaattctgtactccaggttgattaaagactgtgactgactgttcagtatg
gtaaatgttactggaaagtaagccctggtcacaaatttaccaattatcca
gcttttggaatgactgaagcttagcctattctattatcccaccccaaaga
gaggcagaaagaagcaatttttaataatgttaaaaggaaaaagtaaccta
gattaaagtttggttttatcttgttcaacctctagaacaaaagaaattgg
aacaactggcggtcccatttgttagagccatttgctgcttctgggcattc
tgggtgggtcacctggcttcattgctccttaggtttcacgtcttcgtcct
ggaggtctagtaaaagatgaactctagtggaggtttccattacagtattc
atccatcttggatgacgtatatatcagtgtctttggaaaaggggataagg
ttgttttttgtgtttgtcttttgaatagcctttcttcaagagctggtaga
tcgtgataattccaaattcgaggagtggtgtgtagaaatggccgagatgc
gcaagcagagtgtggacaaaggcaaagcgaagcacgaggaggtgaaggag
ctgtaccaaaggttgcctgctggagctggtctgtgagatattccaggacg
acactattgccattgaatgcctggggttttgttctgtggtgtttttatct
ttacctgttgcaaaaatgtatatgaaaaacccatttcctcctctaagagg
ccagcttattctaaatcattatgctaagtaggcatagagtatcccatata
cttcgaaaaggaccttttcaaagtgggaggctgttagagaatgaaatcct
aagtcagcactctgcactcatgacctgtgaagacttttactgtgggctgg
tgtggcagcttagggaaaagtgcttgccaccaagcctgccaaccttgcgt
ttgactttcaagacacatggtggaggagagctgaccctcaggccgctctc
gactttgctgttgtgcttttctcacacacacacacacagacataggaaaa
ggacatttttactgccagatgtgtgtctaattcctcacggagctgcagat
tctcttgagctaagcaggcttggtctacataaccaagtccaggctagcat
gggcatgtaataagcct
gaattcagaggcagcgacatgggaagaggtgagctgggccacagagcttt
aggtgctgttctgagacgcccactggttgcccatgaagaccctggggagc
cacagaaggtgttgggcatggataatgaatgccattgctgaagcaatcct
ctcagcagccagttgcaaggaaacttctacgatgctggaggctgagcaac
cacactacagcagactgggtgggaagtctaggctgtgggagcgaggtggg
aaaagccccagacatggctctcagcaatctgccttctggttgctgacgag
gagtttgcatctgtacctgagtggtgtcagcacaccaaatgccctgagat
aaagagcaaaagtcagcgagacacctattgtgtgccatacaccatactaa
gtaccccggacatagaagggagctgctgcttagaggacacacacacgcgc
acacacacacacacatacattcatgttcacgcacacatatcttgcacaca
tacagtaagaaattagttcaatttatcctgtgtggaaggccgtgtcatct
tcacttacagatgggcaagctgaggttcaaagggcatgatagcctgctcc
aggtcccatcgcttgtagatagttggtaccccacccccacccctgctcct
aaggtgttaatctatctaaggacaagtgccttggccccacaagccacagg
actgtgggttccttggggggagttgggggaaagacccagacagcaaagtt
tgtaattaccccctgagctaaactgaagagctcccactggtgtgttccct
gggatgcagggggaggggtcatgatttaagcactttaggggaggatttgg
ggctcctacatggcttcttctgattccagtgccaggccctttcccacggt
tctcaaggtcgtcctgtgtctgtcaaggagactggccaatgagattggac
agaagtaaaagggacagacagcctagggtcactggtctggatcacctctt
tcttgcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_137171795_137172981
seq2: B6Ng01-102L02.b_42_1208

seq1  GAATTCTGTACTCCAGGTTGATTAAAGACTGTGACTGACTGTTCAGTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTACTCCAGGTTGATTAAAGACTGTGACTGACTGTTCAGTATG  50

seq1  GTAAATGTTACTGGAAAGTAAGCCCTGGTCACAAATTTACCAATTATCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATGTTACTGGAAAGTAAGCCCTGGTCACAAATTTACCAATTATCCA  100

seq1  GCTTTTGGAATGACTGAAGCTTAGCCTATTCTATTATCCCACCCCAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGGAATGACTGAAGCTTAGCCTATTCTATTATCCCACCCCAAAGA  150

seq1  GAGGCAGAAAGAAGCAATTTTTAATAATGTTAAAAGGAAAAAGTAACCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGAAAGAAGCAATTTTTAATAATGTTAAAAGGAAAAAGTAACCTA  200

seq1  GATTAAAGTTTGGTTTTATCTTGTTCAACCTCTAGAACAAAAGAAATTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAAGTTTGGTTTTATCTTGTTCAACCTCTAGAACAAAAGAAATTGG  250

seq1  AACAACTGGCGGTCCCATTTGTTAGAGCCATTTGCTGCTTCTGGGCATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACTGGCGGTCCCATTTGTTAGAGCCATTTGCTGCTTCTGGGCATTC  300

seq1  TGGGTGGGTCACCTGGCTTCATTGCTCCTTAGGTTTCACGTCTTCGTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGGGTCACCTGGCTTCATTGCTCCTTAGGTTTCACGTCTTCGTCCT  350

seq1  GGAGGTCTAGTAAAAGATGAACTCTAGTGGAGGTTTCCATTACAGTATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTCTAGTAAAAGATGAACTCTAGTGGAGGTTTCCATTACAGTATTC  400

seq1  ATCCATCTTGGATGACGTATATATCAGTGTCTTTGGAAAAGGGGATAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATCTTGGATGACGTATATATCAGTGTCTTTGGAAAAGGGGATAAGG  450

seq1  TTGTTTTTTGTGTTTGTCTTTTGAATAGCCTTTCTTCAAGAGCTGGTAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTTGTGTTTGTCTTTTGAATAGCCTTTCTTCAAGAGCTGGTAGA  500

seq1  TCGTGATAATTCCAAATTCGAGGAGTGGTGTGTAGAAATGGCCGAGATGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGATAATTCCAAATTCGAGGAGTGGTGTGTAGAAATGGCCGAGATGC  550

seq1  GCAAGCAGAGTGTGGACAAAGGCAAAGCGAAGCACGAGGAGGTGAAGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCAGAGTGTGGACAAAGGCAAAGCGAAGCACGAGGAGGTGAAGGAG  600

seq1  CTGTACCAAAGGTTGCCTGCTGGAGCTGGTCTGTGAGATATTCCAGGACG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACCAAAGGTTGCCTGCTGGAGCTGGTCTGTGAGATATTCCAGGACG  650

seq1  ACACTATTGCCATTGAATGCCTGGGGTTTTGTTCTGTGGTGTTTTTATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTATTGCCATTGAATGCCTGGGGTTTTGTTCTGTGGTGTTTTTATCT  700

seq1  TTACCTGTTGCAAAAATGTATATGAAAAACCCATTTCCTCCTCTAAGAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTGTTGCAAAAATGTATATGAAAAACCCATTTCCTCCTCTAAGAGG  750

seq1  CCAGCTTATTCTAAAATCATTATGCTAAGTAGGCATAGAGTATCCCATAT  800
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CCAGCTTATTCT-AAATCATTATGCTAAGTAGGCATAGAGTATCCCATAT  799

seq1  ACTTCGAAAAGGACCTTTTCAAAGTGGGAGGCTGTTAGAGAATGAAATCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCGAAAAGGACCTTTTCAAAGTGGGAGGCTGTTAGAGAATGAAATCC  849

seq1  TAAGTCAGCACTCTGCACTCATGACCTGTGAAGACTTTTACTGTGGGCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCAGCACTCTGCACTCATGACCTGTGAAGACTTTTACTGTGGGCTG  899

seq1  GTGTGGCAGCTTAGGGAAAAAGTGCTTGCCACCAAGCCTGCCAACCTTGC  950
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GTGTGGCAGCTTAGGG-AAAAGTGCTTGCCACCAAGCCTGCCAACCTTGC  948

seq1  GTCTGACTTTCAGGACACATGGTGGAGGAGAGCTGACCCCTCCAGGCCGC  1000
      || ||||||||| ||||||||||||||||||||||||||   ||||||||
seq2  GTTTGACTTTCAAGACACATGGTGGAGGAGAGCTGACCC--TCAGGCCGC  996

seq1  TCTCCGACCTTTGCTGGTGTGCTTCCCCTCACCACACACACACACAGAAC  1050
      ||| ||| |||||||| |||||||   |||| ||||||||||||||| ||
seq2  TCT-CGA-CTTTGCTGTTGTGCTT-TTCTCA-CACACACACACACAG-AC  1041

seq1  ATAAGGAAAAAGGACATTTTTACTGCCAGATGTGGTGGTCTTTAATCCCC  1100
      |||  | |||||||||||||||||||||||||||   ||| | | ||| |
seq2  ATA--GGAAAAGGACATTTTTACTGCCAGATGTG--TGTC-TAATTCCTC  1086

seq1  ACGGAGGCTGGCAGATCTCTC-TGAGCTATAGGCAAGCCTGGTCTACATA  1149
      ||||| ||| |||||| |||| |||||  || ||| || |||||||||||
seq2  ACGGA-GCT-GCAGAT-TCTCTTGAGC--TAAGCAGGCTTGGTCTACATA  1131

seq1  ACAAATCCCAGGCTAGCCATGGCTATGTAATTAAGCCT  1187
      || ||  ||||||||| |||||  |||||| |||||||
seq2  ACCAAGTCCAGGCTAG-CATGGGCATGTAA-TAAGCCT  1167

seq1: chr4_137293764_137294770
seq2: B6Ng01-102L02.g_69_1076 (reverse)

seq1  AGGCAAGAAGGAGGTGATCCAG-CCAGTGACCCTAGGCTGTTCTGTCCCT  49
      ||||||||| |||||||||||| ||||||||||||||||| |||||||||
seq2  AGGCAAGAAAGAGGTGATCCAGACCAGTGACCCTAGGCTG-TCTGTCCCT  49

seq1  TCTAC-TCTGTCAACTCTCATTGCCCAGTCTCCCTGACAGACACAGGGAC  98
      | ||| |||||| | |||||||| ||||||||| ||||||||||| ||||
seq2  TTTACTTCTGTCCAATCTCATTGGCCAGTCTCCTTGACAGACACA-GGAC  98

seq1  GACCTTGAGGAACCGTGGGAAAGGGCCTGGCACTGGAATCAGAGGAAGCC  148
      |||||||| |||||||||||||||||||||||||||||||||| ||||||
seq2  GACCTTGA-GAACCGTGGGAAAGGGCCTGGCACTGGAATCAGAAGAAGCC  147

seq1  ATGTAGGGAGCCCAAATCCTCCCCT-AAGTGCTT-AATCATGACCCCTCC  196
      |||||||   ||||||||||||||| |||||||| |||||||||||||||
seq2  ATGTAGGAGCCCCAAATCCTCCCCTAAAGTGCTTAAATCATGACCCCTCC  197

seq1  CCCTGCATCCCAGGGAACACACCAGTGGGAGCTCTTCAGTTTAGCTCAGG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCATCCCAGGGAACACACCAGTGGGAGCTCTTCAGTTTAGCTCAGG  247

seq1  GGGTAATTACAAACTTTGCTGTCTGGGTCTTTCCCCCAACTCCCCCCAAG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAATTACAAACTTTGCTGTCTGGGTCTTTCCCCCAACTCCCCCCAAG  297

seq1  GAACCCACAGTCCTGTGGCTTGTGGGGCCAAGGCACTTGTCCTTAGATAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCACAGTCCTGTGGCTTGTGGGGCCAAGGCACTTGTCCTTAGATAG  347

seq1  ATTAACACCTTAGGAGCAGGGGTGGGGGTGGGGTACCAACTATCTACAAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACACCTTAGGAGCAGGGGTGGGGGTGGGGTACCAACTATCTACAAG  397

seq1  CGATGGGACCTGGAGCAGGCTATCATGCCCTTTGAACCTCAGCTTGCCCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGGGACCTGGAGCAGGCTATCATGCCCTTTGAACCTCAGCTTGCCCA  447

seq1  TCTGTAAGTGAAGATGACACGGCCTTCCACACAGGATAAATTGAACTAAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAAGTGAAGATGACACGGCCTTCCACACAGGATAAATTGAACTAAT  497

seq1  TTCTTACTGTATGTGTGCAAGATATGTGTGCGTGAACATGAATGTATGTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTACTGTATGTGTGCAAGATATGTGTGCGTGAACATGAATGTATGTG  547

seq1  TGTGTGTGTGTGCGCGTGTGTGTGTCCTCTAAGCAGCAGCTCCCTTCTAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGCGCGTGTGTGTGTCCTCTAAGCAGCAGCTCCCTTCTAT  597

seq1  GTCCGGGGTACTTAGTATGGTGTATGGCACACAATAGGTGTCTCGCTGAC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCGGGGTACTTAGTATGGTGTATGGCACACAATAGGTGTCTCGCTGAC  647

seq1  TTTTGCTCTTTATCTCAGGGCATTTGGTGTGCTGACACCACTCAGGTACA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTCTTTATCTCAGGGCATTTGGTGTGCTGACACCACTCAGGTACA  697

seq1  GATGCAAACTCCTCGTCAGCAACCAGAAGGCAGATTGCTGAGAGCCATGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAAACTCCTCGTCAGCAACCAGAAGGCAGATTGCTGAGAGCCATGT  747

seq1  CTGGGGCTTTTCCCACCTCGCTCCCACAGCCTAGACTTCCCACCCAGTCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGCTTTTCCCACCTCGCTCCCACAGCCTAGACTTCCCACCCAGTCT  797

seq1  GCTGTAGTGTGGTTGCTCAGCCTCCAGCATCGTAGAAGTTTCCTTGCAAC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAGTGTGGTTGCTCAGCCTCCAGCATCGTAGAAGTTTCCTTGCAAC  847

seq1  TGGCTGCTGAGAGGATTGCTTCAGCAATGGCATTCATTATCCATGCCCAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCTGAGAGGATTGCTTCAGCAATGGCATTCATTATCCATGCCCAA  897

seq1  CACCTTCTGTGGCTCCCCAGGGTCTTCATGGGCAACCAGTGGGCGTCTCA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTCTGTGGCTCCCCAGGGTCTTCATGGGCAACCAGTGGGCGTCTCA  947

seq1  GAACAGCACCTAAAGCTCTGTGGCCCAGCTCACCTCTTCCCATGTCGCTG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGCACCTAAAGCTCTGTGGCCCAGCTCACCTCTTCCCATGTCGCTG  997

seq1  CCTCTGAATTC  1007
      |||||||||||
seq2  CCTCTGAATTC  1008