BAC Information

Click to search

BAC

Clone NameB6Ng01-103E12
Chromosome4 (Build37)
Map Location 126,076,795 - 126,257,424
singlet/doubletdoublet
Overlap geneEif2c3, Eif2c1, LOC100039351, Eif2c4, Clspn
Upstream geneLOC100039298, Grik3, Ftl2, Csf3r, Mrps15, 1810007P19Rik, LOC100039645, Lsm10, Stk40, 2610027C15Rik, 1700029G01Rik, Thrap3, Mtap7d1, Trappc3, Col8a2, EG667193, Adprhl2, Tekt2
Downstream geneLOC665197, 5730409E04Rik, LOC620877, Psmb2, Tcfap2e, Ncdn, AU040320, Sfpq, Zmym1, LOC665245, Zmym6, LOC100039968, LOC621588, Dlgap3, BC003266, Gja4, Gjb3, Gjb4, Gjb5, LOC667296
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103E12.bB6Ng01-103E12.g
ACCDH911921DH911922
length1,156893
definitionDH911921|Mus musculus domesticus DNA, BAC clone: B6Ng01-103E12, 5' end.DH911922|Mus musculus domesticus DNA, BAC clone: B6Ng01-103E12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,256,256 - 126,257,424)(126,076,795 - 126,077,696)
sequence
gaattccaggccagtatgggctgcataggaagacctggtctcaaataaca
aaaacaaatttccttccttttaaagccatgtaatgcatataaattctatt
tagcagatgtgctggctagttttatgtcaacctgacacaagctataatca
tggaggagggagcctcaattgagaaaatgcctccataagacagagtggta
cgcaagtgtataggacattttctttttcttttcactgtattattttacac
tcattggtgttttgccggcatatatgtctgcatgaagatgtcagattcta
gaaccctagctatagagagttgtgagctgccatgcagttgccaggaatcg
agcccaggttgtttggaagagcagccagtgctcttaaccactgagccacc
tctctagctcctgtagtgcattttcttaatgagtgactgatggaggaggg
cccagcccactgaggtggtcctggactggtggtcctgggttctataagaa
agcaggttgagctagtcagtatgcacactcctccatggcctctgtatcag
ctcctgtcttcagattcctgccctgcttaagtttctgtcttgatttcttt
tgatgatgaacagtgatgaggaagagtaagctaaataaaccctttcctcc
ccaatttgctttaaaaaaaaaaaaagacttatttatttattatatggtga
gtacactgtagctgtctttagacacaccagaagagggcatcaatctcatt
acagatggttgtaaaccatcatgtggttgctgggatttgaactcacaacc
tttggaagagcagtcagtgctcttaaacactgagccatctctccagccct
tccaatttgctttttctcgtggtgttttatcacagcacaataaccttaac
aagtcagcagccacacttcctcttttatttggctattatcaaattatgtt
aaacacaattataaaaacctgttttattcatttagtataagaaagagtag
caggctgacctcacccttcttgcctcatttatttatacatttattattac
tgtgtgtggatgtacagcatggtgcatctatactaccaacgttatactac
tatactacataaagaggcagagtcacttgtgaaggtggttcttttcccac
ctcgtt
gaattctggcagctgaagactgctggaggaggatgagtagttttcactgg
gggcataagcagctccggtggagtcccttacccttgcacagagtggcagc
actaactgaaaacagcaagttattaaaaaagagaaacaagaagatgggca
ggggatgaagtgtcaggggaactggaggtaggaagtaaggagcatatata
tatatatatattcattcaaaatacatttcatacactcatgaaattctcaa
aataaattttaaaaagaaaggaaaaaagaacaaaatacacaaaccaagag
cttattaaggtgtatggctagccaaatcaaggccttgggctctattctta
gtacattaacaatatgtaaaagtgaaaaagaatggatcacaggggtcctg
tagtagtgaagacctatttgctttgttctgaggcaggtacagtaagcaat
ccatgcctatactcctacagctggggactgagattggagtacaaaggcag
cttggaccacatagggaggtttaagctagggtgagccacacataagaacc
tgtttccagccgggcgtggtggcgcaccgcacgcctttaatcccagcact
cgggaggcagaggcagatggatttctgtgttccaggccagcctggtctac
aaagtgagttccaggacagccaggggctacacagagaaaccctgtctcaa
aaaacaaaaacaaaaaaaacaaacaaaacaaaaaaaaaccaacaacacaa
caaaaagacctgtttccaaaaattaagacattaattatcacaacaaaatc
acttaaaatagcaaatttaattggcaatacctaagagtttgatatcacat
atatgtttgggatagccctggggctattttacttgatgttaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_126256256_126257424
seq2: B6Ng01-103E12.b_45_1200 (reverse)

seq1  AACGAGGTGGG-AAAGAACCAACCTCTACAAGTTGACCTCTGGCCTCTTT  49
      ||||||||||| |||||||| ||||  ||||| ||| |||| ||||||||
seq2  AACGAGGTGGGAAAAGAACC-ACCTTCACAAG-TGA-CTCT-GCCTCTTT  46

seq1  ATGTAGTATAGTAGTTATAACGTGTGTAGTTATAGATGCA-CATGCCTGT  98
      |||||||||||||| ||||||||  |||| |||||||||| |||| ||||
seq2  ATGTAGTATAGTAG-TATAACGTTGGTAG-TATAGATGCACCATG-CTGT  93

seq1  ACATTCACACACAGTAAATAAATAAATGTATAAATAAATGAAGGCAAGAA  148
      |||| ||||||||||||   |||||||||||||||||||| |||||||||
seq2  ACATCCACACACAGTAA--TAATAAATGTATAAATAAATG-AGGCAAGAA  140

seq1  GGGTGAGGTCAGCCCTGCTACTCCTTTCTTATACCTAAATGAATAAAACA  198
      |||||||||||| ||||||||| |||||||||| ||||||||||||||||
seq2  GGGTGAGGTCAG-CCTGCTACT-CTTTCTTATA-CTAAATGAATAAAACA  187

seq1  GGTTTTTATAATTTGTGTTTAACATAATTTGATAATAGCCAAAATAAAGA  248
      ||||||||||| |||||||||||||||||||||||||||||||  |||||
seq2  GGTTTTTATAA-TTGTGTTTAACATAATTTGATAATAGCCAAATAAAAGA  236

seq1  GGAAGTGTGGCTGCTGACTTGTTAAGGTTATTGTTGCTGTGATAAAACAC  298
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GGAAGTGTGGCTGCTGACTTGTTAAGGTTATTG-TGCTGTGATAAAACAC  285

seq1  CACGAGAAAAAGCAAATTGGAAGGGCTGGAGAGATGGCTCAGTGTTTAAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGAGAAAAAGCAAATTGGAAGGGCTGGAGAGATGGCTCAGTGTTTAAG  335

seq1  AGCACTGACTGCTCTTCCAAAGGTTGTGAGTTCAAATCCCAGCAACCACA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGACTGCTCTTCCAAAGGTTGTGAGTTCAAATCCCAGCAACCACA  385

seq1  TGATGGTTTACAACCATCTGTAATGAGATTGATGCCCTCTTCTGGTGTGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGTTTACAACCATCTGTAATGAGATTGATGCCCTCTTCTGGTGTGT  435

seq1  CTAAAGACAGCTACAGTGTACTCACCATATAATAAATAAATAAGTCTTTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGACAGCTACAGTGTACTCACCATATAATAAATAAATAAGTCTTTT  485

seq1  TTTTTTTTTAAAGCAAATTGGGGAGGAAAGGGTTTATTTAGCTTACTCTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTAAAGCAAATTGGGGAGGAAAGGGTTTATTTAGCTTACTCTT  535

seq1  CCTCATCACTGTTCATCATCAAAAGAAATCAAGACAGAAACTTAAGCAGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATCACTGTTCATCATCAAAAGAAATCAAGACAGAAACTTAAGCAGG  585

seq1  GCAGGAATCTGAAGACAGGAGCTGATACAGAGGCCATGGAGGAGTGTGCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAATCTGAAGACAGGAGCTGATACAGAGGCCATGGAGGAGTGTGCA  635

seq1  TACTGACTAGCTCAACCTGCTTTCTTATAGAACCCAGGACCACCAGTCCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGACTAGCTCAACCTGCTTTCTTATAGAACCCAGGACCACCAGTCCA  685

seq1  GGACCACCTCAGTGGGCTGGGCCCTCCTCCATCAGTCACTCATTAAGAAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCACCTCAGTGGGCTGGGCCCTCCTCCATCAGTCACTCATTAAGAAA  735

seq1  ATGCACTACAGGAGCTAGAGAGGTGGCTCAGTGGTTAAGAGCACTGGCTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACTACAGGAGCTAGAGAGGTGGCTCAGTGGTTAAGAGCACTGGCTG  785

seq1  CTCTTCCAAACAACCTGGGCTCGATTCCTGGCAACTGCATGGCAGCTCAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCAAACAACCTGGGCTCGATTCCTGGCAACTGCATGGCAGCTCAC  835

seq1  AACTCTCTATAGCTAGGGTTCTAGAATCTGACATCTTCATGCAGACATAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTCTATAGCTAGGGTTCTAGAATCTGACATCTTCATGCAGACATAT  885

seq1  ATGCCGGCAAAACACCAATGAGTGTAAAATAATACAGTGAAAAGAAAAAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCGGCAAAACACCAATGAGTGTAAAATAATACAGTGAAAAGAAAAAG  935

seq1  AAAATGTCCTATACACTTGCGTACCACTCTGTCTTATGGAGGCATTTTCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTCCTATACACTTGCGTACCACTCTGTCTTATGGAGGCATTTTCT  985

seq1  CAATTGAGGCTCCCTCCTCCATGATTATAGCTTGTGTCAGGTTGACATAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGAGGCTCCCTCCTCCATGATTATAGCTTGTGTCAGGTTGACATAA  1035

seq1  AACTAGCCAGCACATCTGCTAAATAGAATTTATATGCATTACATGGCTTT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGCCAGCACATCTGCTAAATAGAATTTATATGCATTACATGGCTTT  1085

seq1  AAAAGGAAGGAAATTTGTTTTTGTTATTTGAGACCAGGTCTTCCTATGCA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAAGGAAATTTGTTTTTGTTATTTGAGACCAGGTCTTCCTATGCA  1135

seq1  GCCCATACTGGCCTGGAATTC  1169
      |||||||||||||||||||||
seq2  GCCCATACTGGCCTGGAATTC  1156

seq1: chr4_126076795_126077696
seq2: B6Ng01-103E12.g_68_960

seq1  GAATTCTGGCAGCTGAAGACTGCTGGAGGAGGATGAGTAGTTTTCACTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGCAGCTGAAGACTGCTGGAGGAGGATGAGTAGTTTTCACTGG  50

seq1  GGGCATAAGCAGCTCCGGTGGAGTCCCTTACCCTTGCACAGAGTGGCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATAAGCAGCTCCGGTGGAGTCCCTTACCCTTGCACAGAGTGGCAGC  100

seq1  ACTAACTGAAAACAGCAAGTTATTAAAAAAGAGAAACAAGAAGATGGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACTGAAAACAGCAAGTTATTAAAAAAGAGAAACAAGAAGATGGGCA  150

seq1  GGGGATGAAGTGTCAGGGGAACTGGAGGTAGGAAGTAAGGAGCATATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATGAAGTGTCAGGGGAACTGGAGGTAGGAAGTAAGGAGCATATATA  200

seq1  TATATATATATTCATTCAAAATACATTTCATACACTCATGAAATTCTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATTCATTCAAAATACATTTCATACACTCATGAAATTCTCAA  250

seq1  AATAAATTTTAAAAAGAAAGGAAAAAAGAACAAAATACACAAACCAAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATTTTAAAAAGAAAGGAAAAAAGAACAAAATACACAAACCAAGAG  300

seq1  CTTATTAAGGTGTATGGCTAGCCAAATCAAGGCCTTGGGCTCTATTCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTAAGGTGTATGGCTAGCCAAATCAAGGCCTTGGGCTCTATTCTTA  350

seq1  GTACATTAACAATATGTAAAAGTGAAAAAGAATGGATCACAGGGGTCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATTAACAATATGTAAAAGTGAAAAAGAATGGATCACAGGGGTCCTG  400

seq1  TAGTAGTGAAGACCTATTTGCTTTGTTCTGAGGCAGGTACAGTAAGCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGTGAAGACCTATTTGCTTTGTTCTGAGGCAGGTACAGTAAGCAAT  450

seq1  CCATGCCTATACTCCTACAGCTGGGGACTGAGATTGGAGTACAAAGGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCCTATACTCCTACAGCTGGGGACTGAGATTGGAGTACAAAGGCAG  500

seq1  CTTGGACCACATAGGGAGGTTTAAGCTAGGGTGAGCCACACATAAGAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGACCACATAGGGAGGTTTAAGCTAGGGTGAGCCACACATAAGAACC  550

seq1  TGTTTCCAGCCGGGCGTGGTGGCGCACCGCACGCCTTTAATCCCAGCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCAGCCGGGCGTGGTGGCGCACCGCACGCCTTTAATCCCAGCACT  600

seq1  CGGGAGGCAGAGGCAGATGGATTTCTGTGTTCCAGGCCAGCCTGGTCTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGAGGCAGAGGCAGATGGATTTCTGTGTTCCAGGCCAGCCTGGTCTAC  650

seq1  AAAGTGAGTTCCAGGACAGCCA-GGGCTACACAGAGAAACCCTGTCTCAA  699
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAAGTGAGTTCCAGGACAGCCAGGGGCTACACAGAGAAACCCTGTCTCAA  700

seq1  AAAACAAAAACAAAAAAAAACAAAACAAAACAAAAAAAAAACCAACAACA  749
      |||||||||||||||||||   ||||||||| ||||||||||||||||| 
seq2  AAAACAAAAACAAAAAAAA--CAAACAAAAC-AAAAAAAAACCAACAAC-  746

seq1  ACAACAAAAAGAACCTGTTTCCAAAAATTAAGACAATAAATCATCAACAA  799
      ||||||||||| |||||||||||||||||||||| || ||| ||| ||||
seq2  ACAACAAAAAG-ACCTGTTTCCAAAAATTAAGAC-ATTAATTATC-ACAA  793

seq1  CAAAAATCACTTAAAATAGCAAATTTAATTGGCAAAAACCTAAGAGTTTG  849
      | ||||||||||||||||||||||||||||||| || |||||||||||||
seq2  C-AAAATCACTTAAAATAGCAAATTTAATTGGC-AATACCTAAGAGTTTG  841

seq1  ATAGCACATATATGTTGTGGATAGCCCTGGGGCTAATTATACTTGATGTT  899
      ||| ||||||||||||  |||||||||||||||| ||| |||||||||||
seq2  ATATCACATATATGTTTGGGATAGCCCTGGGGCT-ATTTTACTTGATGTT  890

seq1  AAT  902
      |||
seq2  AAT  893