BAC Information

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BAC

Clone NameB6Ng01-103O16
Chromosome4 (Build37)
Map Location 24,483,245 - 24,484,298
singlet/doubletsinglet
Overlap geneF730047E07Rik
Upstream geneLOC100040464, LOC623873, LOC664973
Downstream geneKlhl32, 1110007M04Rik, C230012O17Rik, Gpr63, Fhl5, 1810074P20Rik, Prdx6-rs2, LOC665019, LOC625732
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103O16.bB6Ng01-103O16.g
ACCDH912364DH912365
length9941,044
definitionDH912364|Mus musculus domesticus DNA, BAC clone: B6Ng01-103O16, 5' end.DH912365|Mus musculus domesticus DNA, BAC clone: B6Ng01-103O16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctacgcctgataaacaggttcaatgaagtatctggatataaaat
taactcaaacaagtcaatggcctttctttacacaaaggataaacaggaaa
ttagggaagaaattagggaaacaacacccttctcaatagtcacaaataat
ataaaatagcttggcatgactctaactaaggaagtgaaagatctgtatga
taagaacttcaagtctgtgaagaaagaaattaaagaagatctcagaagat
ggattggcaggatcaatatagtaaaaatggctatcttgccaaaagcaatc
tacacattcaatgcaatccccatcaaaattccaactcaattcttcaacga
attagaaagggcaagctccaaattcatctggaataacaaaaaacctagga
tagcaaaaactcttctcaaggataaataaacctctggtggaatcaccatg
cctgacctaaagctgtactacagaacaattgtgattaaaaactgcatggt
actggtatagagacagacaagtagaccaatgaaatagaattgaacaccca
gaaatgaacccacacacctatggtcacttgatctttgacaagggagctaa
aaccatccagtggaaaaaagacagcattttcaacaaatggtgctggcaca
acaggcggttatcatgtagaagaatggaaattgatccatttttatctcct
tgtactaaggtcaaatctaagtggattaaggaacacacataaaaccagag
acactgaaacttatagaggagaaagtggggaaaagccttgaagacgtggg
tacgggggaaaaattcctgaatagaacagcaatggcttgtgctgtaagat
agagaattgacaaatgggacctcataaaattgcaaagcttctgtaaggca
aaagacactgtcaataagacaaaaaggccaccaacagattgggaaaggat
cttaacctatcctaaatcagatagcggactaatatccaatcata
gaattcagaaattcattgattgtcccagctctgggtagattagtagagac
ttgcttgaaggagtggaatttatgaaatgtttgcctcatccggcaagctg
ggctgctgtaatacagctgcctcctcagtggtttgctttgatcctgtgga
atgaaaggacaggaggatcagctcaggtctaaatgagattacagctggtt
ctgccgcttatctggtctattgccaactagtgtggctttgcacgtcctaa
ggggtttacaacagaaactgtttattgagtatcatcggtttactcaacac
aagcaggctaatccttcccagcctcagcatgctgtagaattgtgcaggag
ccaaaccaaaagctggtattgccagaccctctagagccctttgtctcgct
ctatattgatttttacctgagttaaagacagtgaaaaaaaaataaaacca
ataaccattcctattatgagcaaaaggttaatcttacctaaaatcttaca
aaaagcatctgttaaccctagaagggacagccttcctgttttgcgttttt
agtcaagtgggatttttttttttttttttttttttttttttttttagttt
tgaattttaaagaacaagataagaaaaacagtttaagagatcttgctagg
cattgaaagttaagtacttaagtcttctagtagtgatatataacacatgg
ctttgtaaatggaatatgaggtagcttatttctaaataaaagtttttact
ttatatccatttttcatggaataatttattttttgttattacctaccagg
gctaagaagcctttccatttgtggaaaataaaacttatgaatgagtgatc
gtttttatctagtgggatatcttggtttaaagaaaatttctgtaatataa
agaaatttgtggttgggggaactgtaaaggcaactttagtaaattactca
atttcattttactcatcaagttatcaatcttgagttttttttaattacta
aacaagaatttacttgagaatctattgaactccatagaagagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_24483245_24484298
seq2: B6Ng01-103O16.g_70_1113

seq1  GAATTCAGAAATTCATTGATTGTCCCAGCTCTGGGTAGATTAGTAGAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAATTCATTGATTGTCCCAGCTCTGGGTAGATTAGTAGAGAC  50

seq1  TTGCTTGAAGGAGTGGAATTTATGAAATGTTTGCCTCATCCGGCAAGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTGAAGGAGTGGAATTTATGAAATGTTTGCCTCATCCGGCAAGCTG  100

seq1  GGCTGCTGTAATACAGCTGCCTCCTCAGTGGTTTGCTTTGATCCTGTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCTGTAATACAGCTGCCTCCTCAGTGGTTTGCTTTGATCCTGTGGA  150

seq1  ATGAAAGGACAGGAGGATCAGCTCAGGTCTAAATGAGATTACAGCTGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGGACAGGAGGATCAGCTCAGGTCTAAATGAGATTACAGCTGGTT  200

seq1  CTGCCGCTTATCTGGTCTATTGCCAACTAGTGTGGCTTTGCACGTCCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCGCTTATCTGGTCTATTGCCAACTAGTGTGGCTTTGCACGTCCTAA  250

seq1  GGGGTTTACAACAGAAACTGTTTATTGAGTATCATCGGTTTACTCAACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTTACAACAGAAACTGTTTATTGAGTATCATCGGTTTACTCAACAC  300

seq1  AAGCAGGCTAATCCTTCCCAGCCTCAGCATGCTGTAGAATTGTGCAGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGCTAATCCTTCCCAGCCTCAGCATGCTGTAGAATTGTGCAGGAG  350

seq1  CCAAACCAAAAGCTGGTATTGCCAGACCCTCTAGAGCCCTTTGTCTCGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACCAAAAGCTGGTATTGCCAGACCCTCTAGAGCCCTTTGTCTCGCT  400

seq1  CTATATTGATTTTTACCTGAGTTAAAGACAGTGAAAAAAAAATAAAACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATTGATTTTTACCTGAGTTAAAGACAGTGAAAAAAAAATAAAACCA  450

seq1  ATAACCATTCCTATTATGAGCAAAAGGTTAATCTTACCTAAAATCTTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCATTCCTATTATGAGCAAAAGGTTAATCTTACCTAAAATCTTACA  500

seq1  AAAAGCATCTGTTAACCCTAGAAGGGACAGCCTTCCTGTTTTGCGTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCATCTGTTAACCCTAGAAGGGACAGCCTTCCTGTTTTGCGTTTTT  550

seq1  AGTCAAGTGGGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGTT  600
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGTCAAGTGGGA-TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGTT  599

seq1  TTGAATTTTAAAGAACAAGATAAGAAAAACAGTTTAAGAGATCTTGCTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTTTAAAGAACAAGATAAGAAAAACAGTTTAAGAGATCTTGCTAG  649

seq1  GCATTGAAAGTTAAGTACTTAAGTCTTCTAGTAGTGATATATAACACATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGAAAGTTAAGTACTTAAGTCTTCTAGTAGTGATATATAACACATG  699

seq1  GCTTTGTAAATGGAATATGAGGTAGCTTATTTCTAAATAAAAGTTTTTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGTAAATGGAATATGAGGTAGCTTATTTCTAAATAAAAGTTTTTAC  749

seq1  TTTATATCCATTTTACATGGAATATTTTATTTTTTG-TATTACCTACCA-  798
      |||||||||||||| ||||||||| ||||||||||| |||||||||||| 
seq2  TTTATATCCATTTTTCATGGAATAATTTATTTTTTGTTATTACCTACCAG  799

seq1  GGCT-AGAAG-CTTTC--ATTGTGGAAAATAAAACTTATGAATGAGTGAT  844
      |||| ||||| |||||   |||||||||||||||||||||||||||||||
seq2  GGCTAAGAAGCCTTTCCATTTGTGGAAAATAAAACTTATGAATGAGTGAT  849

seq1  CGTTTTTATCTAGTGGTATATCTTGGTTAATAGTAAATTTCTGTAATATA  894
      |||||||||||||||| ||||||||||| | || ||||||||||||||||
seq2  CGTTTTTATCTAGTGGGATATCTTGGTTTAAAGAAAATTTCTGTAATATA  899

seq1  TAAGAAGTTGGTGGTTTGGGGGAACTGTAAAGGCAACTTTAGTAAATAAC  944
       ||||| || |||| |||||||||||||||||||||||||||||||| ||
seq2  -AAGAAATTTGTGG-TTGGGGGAACTGTAAAGGCAACTTTAGTAAATTAC  947

seq1  TCAATTTCCATTTTTACTCATCAAGTTATTCAATCTTTGGAGTTTTTTTT  994
      ||||||||   ||||||||||||||||| ||||||||  ||| |||||||
seq2  TCAATTTC--ATTTTACTCATCAAGTTA-TCAATCTT--GAG-TTTTTTT  991

seq1  TAATTACTAAACAAGTAATATTTACCTTGAAGAATCTAATGAAACTACAT  1044
      |||||||||||||||    ||||| |||| |||||||| || |||| || 
seq2  TAATTACTAAACAAG---AATTTA-CTTG-AGAATCTATTG-AACTCCA-  1034

seq1  TAGAAGAGTT  1054
      ||||||||||
seq2  TAGAAGAGTT  1044