BAC Information

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BAC

Clone NameB6Ng01-104O18
Chromosome4 (Build37)
Map Location 6,362,306 - 6,363,381
singlet/doubletsinglet
Overlap geneNsmaf
Upstream gene1700012H17Rik, LOC669309, 3110003A22Rik, Cyp7a1, Sdcbp
Downstream geneLOC100039397, LOC100039414, Tox, LOC100039421, LOC666700
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104O18.bB6Ng01-104O18.g
ACCDH913082DH913083
length1,1121,077
definitionDH913082|Mus musculus domesticus DNA, BAC clone: B6Ng01-104O18, 5' end.DH913083|Mus musculus domesticus DNA, BAC clone: B6Ng01-104O18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatagttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttattacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgctttttggcaagatagccatt
tttacatgttgatcctgccaatccatgagcatgggagatcttttccatct
tctgagatcttctttaattttctttcttcagagatttgaagtttttatca
tacagatctttcacctccttagtagagtcacgccaagatattttatatta
tttgtgactattgaagaagggtgttgtttccctaatttcttttctcagct
gttatcctttgtatagagagggcaatgacttggtttgagttattttatat
cagctacttcaccggagctggttatcatgttagagtctctggtagaattt
taaggcacctta
gaattcctataaaaattctatgaactcgaggtttaaattgttgttacaca
atctctatttgcaaaggtacccatatttatattagtatggttttaaagta
ctgacattgaaatcacaaatgttatattaaaaagtgaatcaccaataagt
ggatacaatacatcttgtaaatgttattatttgtaccaagtagtcaatca
cataaggctaggaagttgacaatccaggagacagttctctaacaaatgga
aaaagcaaaggcatggaggtatgacacattcaaagacatcaaaaagtgat
gtcacctccctcaaggagcatagcctcatggtgtctgcatgaggccacca
ctccacctgcatcttaaaactatagaatcaataccaccatctccagagtg
catcatacctggactgttatttcctgcctttcccctcatatgtaactcct
cccctctccactgttcctgaatctcaagggcagttgttctagcagtgttc
agaatgcagacactgctctgtccctgtgtgttcactaactgctctgagga
gagctagaatggcaccctcttccatttcaaacaggtagccacattgatgg
tatcacaccatcctctggccatttgtctgaccgttgtgtagcaagactct
ttgctagagttatttgtaacttctttgggcccttagccaccctttatccc
actaaactactgaagccactccttctgagacctccaggtcaccaaacctc
ataatcaattgtctagcctctgtggctgccatgggaagttctaccctgcc
ccaggacttgaagttccttagaaaccccaactcttcctttatctttctgg
cttcagcctcatgaaacctagacaagaacaccctggcgtctgctccaagt
ctcggggaggtctacatacaccccattcatcaaatctccagcaagctttt
cctccccatggtgccccagccctgtccttttatttcagtaaaaggtagcc
cgatccagctggtcagaggtcttttctgggttgtcctgttttggtgtgca
tgcaggcttttctgcagactccctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_6362306_6363381
seq2: B6Ng01-104O18.g_68_1144

seq1  GAATTCCTATAAAAATTCTATGAACTCGAGGTTTAAATTGTTGTTACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATAAAAATTCTATGAACTCGAGGTTTAAATTGTTGTTACACA  50

seq1  ATCTCTATTTGCAAAGGTACCCATATTTATATTAGTATGGTTTTAAAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTATTTGCAAAGGTACCCATATTTATATTAGTATGGTTTTAAAGTA  100

seq1  CTGACATTGAAATCACAAATGTTATATTAAAAAGTGAATCACCAATAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACATTGAAATCACAAATGTTATATTAAAAAGTGAATCACCAATAAGT  150

seq1  GGATACAATACATCTTGTAAATGTTATTATTTGTACCAAGTAGTCAATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACAATACATCTTGTAAATGTTATTATTTGTACCAAGTAGTCAATCA  200

seq1  CATAAGGCTAGGAAGTTGACAATCCAGGAGACAGTTCTCTAACAAATGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGGCTAGGAAGTTGACAATCCAGGAGACAGTTCTCTAACAAATGGA  250

seq1  AAAAGCAAAGGCATGGAGGTATGACACATTCAAAGACATCAAAAAGTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAAAGGCATGGAGGTATGACACATTCAAAGACATCAAAAAGTGAT  300

seq1  GTCACCTCCCTCAAGGAGCATAGCCTCATGGTGTCTGCATGAGGCCACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCTCCCTCAAGGAGCATAGCCTCATGGTGTCTGCATGAGGCCACCA  350

seq1  CTCCACCTGCATCTTAAAACTATAGAATCAATACCACCATCTCCAGAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACCTGCATCTTAAAACTATAGAATCAATACCACCATCTCCAGAGTG  400

seq1  CATCATACCTGGACTGTTATTTCCTGCCTTTCCCCTCATATGTAACTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATACCTGGACTGTTATTTCCTGCCTTTCCCCTCATATGTAACTCCT  450

seq1  CCCCTCTCCACTGTTCCTGAATCTCAAGGGCAGTTGTTCTAGCAGTGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCTCCACTGTTCCTGAATCTCAAGGGCAGTTGTTCTAGCAGTGTTC  500

seq1  AGAATGCAGACACTGCTCTGTCCCTGTGTGTTCACTAACTGCTCTGAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGCAGACACTGCTCTGTCCCTGTGTGTTCACTAACTGCTCTGAGGA  550

seq1  GAGCTAGAATGGCACCCTCTTCCATTTCAAACAGGTAGCCACATTGATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTAGAATGGCACCCTCTTCCATTTCAAACAGGTAGCCACATTGATGG  600

seq1  TATCACACCATCCTCTGGCCATTTGTCTGACCGTTGTGTAGCAAGACTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACACCATCCTCTGGCCATTTGTCTGACCGTTGTGTAGCAAGACTCT  650

seq1  TTGCTAGAGTTATTTGTAACTTCTTTGGGCCCTTAGCCACCCTTTATCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAGAGTTATTTGTAACTTCTTTGGGCCCTTAGCCACCCTTTATCCC  700

seq1  ACTAAACTACTGAAGCCACTCCTTCTGAGACCTCCAGGTCACCAAACCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAACTACTGAAGCCACTCCTTCTGAGACCTCCAGGTCACCAAACCTC  750

seq1  ATAATCAATTGTCTAGCCTCTGTGGCTGCCATGGGAAGTTCTACCCTGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCAATTGTCTAGCCTCTGTGGCTGCCATGGGAAGTTCTACCCTGCC  800

seq1  CCAGGACTTGAAGTTCCTTAGAAACCCCAACTCTTCCTTTATCTTTCTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACTTGAAGTTCCTTAGAAACCCCAACTCTTCCTTTATCTTTCTGG  850

seq1  CTTCAGCCTCATGAAACCTAGACAAGAACACCCTGGCGTCTGCTCCAAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGCCTCATGAAACCTAGACAAGAACACCCTGGCGTCTGCTCCAAGT  900

seq1  CTCGGGGAGGTCTACATACACCCCATTCATCAAATCTCCAGCAAGCTTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGGGAGGTCTACATACACCCCATTCATCAAATCTCCAGCAAGCTTTT  950

seq1  CCTCCCCAT-GTGCCCCAGCCCTGGCCTTTTATTTCAGTAAAAGGTAGCC  999
      ||||||||| |||||||||||||| |||||||||||||||||||||||||
seq2  CCTCCCCATGGTGCCCCAGCCCTGTCCTTTTATTTCAGTAAAAGGTAGCC  1000

seq1  CGATCCAGCTGGTCAGAAGTC-TTTCTGGGTTGTCCTGTTTT-GTGTGCA  1047
      ||||||||||||||||| ||| |||||||||||||||||||| |||||||
seq2  CGATCCAGCTGGTCAGAGGTCTTTTCTGGGTTGTCCTGTTTTGGTGTGCA  1050

seq1  TTGCCAGGCTTTTCTGCAGACTCACTCTC  1076
      |   ||||||||||||||||||| |||||
seq2  T--GCAGGCTTTTCTGCAGACTCCCTCTC  1077