BAC Information

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BAC

Clone NameB6Ng01-105B10
Chromosome4 (Build37)
Map Location 122,372,311 - 122,508,842
singlet/doubletdoublet
Overlap gene9530002B09Rik
Upstream geneLOC666931, LOC666937, LOC633269, LOC633279
Downstream genePpt1, Cap1, Mfsd2, Mycl1, Trit1, Bmp8b, Oxct2b, Ppie, Hpcal4, Nt5c1a, Heyl, LOC194197, LOC622334, Pabpc4, Bmp8a, Oxct2a, Macf1, D830031N03Rik, LOC100039110, Ndufs5, 6330407G11Rik, Rhbdl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105B10.bB6Ng01-105B10.g
ACCDH913202DH913203
length995905
definitionDH913202|Mus musculus domesticus DNA, BAC clone: B6Ng01-105B10, 5' end.DH913203|Mus musculus domesticus DNA, BAC clone: B6Ng01-105B10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(122,508,156 - 122,508,842)(122,372,311 - 122,373,211)
sequence
gaattcaaggaagccttgcacacatgagaccacacacacacacacacaca
cacacacacacacacaaacacgcatgcacacacacagcctcaccatgttt
ttggtatacctagagttgaacttatttttcttgaatccatctcccttact
gcagtaatattgaataaaatgtgtctttattgcctttgtgtttgaatata
tattcccctttttcctctttctctttctttctttttttgatgtgtagtat
gtgcaagtatgaaagcatgtttgggggctgcaggtgtgtgtgcacatgtg
tggaggccagtggtcaaccttgagtgtaattcctcagtagctatctgcct
ggaacctggactcattggttaggctagactgtctggtcagtaagtcccag
gtagcctccactctctgcctccctagcactgcgcttacaacatgcaccgt
tagatttggggattcaacttatgtccttgttctgcaagaacttttaagtt
caactatcttcaagtctccaatccccccacccccattttgttattgagat
tgcctcactctactgtttgtgggaaattttaaaaaagagccggcatgttc
ctgctctagtgctggcaccagcaggccacaacactatgccccgtggggtc
ctgctggctctgtcccacattccagtaaccaaactgtgccaccaacctcg
aggttagatatcacaatacccagtaacccggtaaaatcaaaactcttaaa
gcttatagttaaccaatcagctttatgaatcaataaaatcacaatttaca
agatgccaatacaataattttagaaccatttgataatgataaaagcttta
ttccaattatcctaactttatatcataactacttgtagctggtaaagcca
cgttggttcatgtctgctgccatcttgccttctcttctcttgagacactc
tctgtctctgcacctcttcactctgcctctcttttcctgtccaat
gaattcctgaacaattttgagtgataatccatctcaaaaacaacaaacca
tccaaccaaccaacagtatatgccaccatcacaaacaacagaatagaaga
gagcagatcttgccacctcacatagatagatctgttatgagcatattggg
agttgataattggactcatccatgtgtattagtgttgacaaaagcagttt
gagggtaatatttttggagtgggttaaggaaaccacagagttgaatttga
gtctgatgagatggacagtcttatgaggctgtattagtctccagggttac
tagggtcagactaaatgggaatgtgagttagattctgtggctcacagagt
tacattgttctgggaatgtccagatccttgtgctgaagtaaaaatattca
gcagactaaaactggcaaacatttaatcgatgcatagacatatagacaga
aagggagcaggtagattctttaagagagagctgatgatattccagcagga
cagggatatttgtatcatagttcacagaagttacctgaccttatttattt
tgcattttgtattctgttttgaacagacagaaaagggcagctcataattt
ttatcagtggctcgtgtaactatatttttcctccatgaaactagattata
gtggtgtagatcctgttagctctagttgattataaaatactacagcttac
tctatcaggatctgaaaaaacaggggagttttttttttttatttttagcc
tttgcttctgtgttggggtccagtcctgtttttctttcttattgtttctt
tttgaggtagcagagcagaaagagcatttgctgtgtgagaattgggttta
gaggatgtttagggtttcttgtataataatggttatttaccataagttca
agtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_122508156_122508842
seq2: B6Ng01-105B10.b_43_729 (reverse)

seq1  ACAGTTTGGTTACTGGAATGTGGGACAGAGCCAGCAGGACCCCACGGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTGGTTACTGGAATGTGGGACAGAGCCAGCAGGACCCCACGGGGC  50

seq1  ATAGTGTTGTGGCCTGCTGGTGCCAGCACTAGAGCAGGAACATGCCGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTTGTGGCCTGCTGGTGCCAGCACTAGAGCAGGAACATGCCGGCT  100

seq1  CTTTTTTAAAATTTCCCACAAACAGTAGAGTGAGGCAATCTCAATAACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTAAAATTTCCCACAAACAGTAGAGTGAGGCAATCTCAATAACAA  150

seq1  AATGGGGGTGGGGGGATTGGAGACTTGAAGATAGTTGAACTTAAAAGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGGGTGGGGGGATTGGAGACTTGAAGATAGTTGAACTTAAAAGTTC  200

seq1  TTGCAGAACAAGGACATAAGTTGAATCCCCAAATCTAACGGTGCATGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGAACAAGGACATAAGTTGAATCCCCAAATCTAACGGTGCATGTTG  250

seq1  TAAGCGCAGTGCTAGGGAGGCAGAGAGTGGAGGCTACCTGGGACTTACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCGCAGTGCTAGGGAGGCAGAGAGTGGAGGCTACCTGGGACTTACTG  300

seq1  ACCAGACAGTCTAGCCTAACCAATGAGTCCAGGTTCCAGGCAGATAGCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGACAGTCTAGCCTAACCAATGAGTCCAGGTTCCAGGCAGATAGCTA  350

seq1  CTGAGGAATTACACTCAAGGTTGACCACTGGCCTCCACACATGTGCACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGAATTACACTCAAGGTTGACCACTGGCCTCCACACATGTGCACAC  400

seq1  ACACCTGCAGCCCCCAAACATGCTTTCATACTTGCACATACTACACATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTGCAGCCCCCAAACATGCTTTCATACTTGCACATACTACACATCA  450

seq1  AAAAAAGAAAGAAAGAGAAAGAGGAAAAAGGGGAATATATATTCAAACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGAAAGAAAGAGAAAGAGGAAAAAGGGGAATATATATTCAAACAC  500

seq1  AAAGGCAATAAAGACACATTTTATTCAATATTACTGCAGTAAGGGAGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAATAAAGACACATTTTATTCAATATTACTGCAGTAAGGGAGATG  550

seq1  GATTCAAGAAAAATAAGTTCAACTCTAGGTATACCAAAAACATGGTGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAAGAAAAATAAGTTCAACTCTAGGTATACCAAAAACATGGTGAGG  600

seq1  CTGTGTGTGTGCATGCGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGTGTGCATGCGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  650

seq1  GTGTGTGGTCTCATGTGTGCAAGGCTTCCTTGAATTC  687
      |||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGGTCTCATGTGTGCAAGGCTTCCTTGAATTC  687

seq1: chr4_122372311_122373211
seq2: B6Ng01-105B10.g_70_974

seq1  GAATTCCTGAACAATTTTGAGTGATAATCCATCTCAAAAACAACAAACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAACAATTTTGAGTGATAATCCATCTCAAAAACAACAAACCA  50

seq1  TCCAACCAACCAACAGTATATGCCACCATCACAAACAACAGAATAGAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACCAACCAACAGTATATGCCACCATCACAAACAACAGAATAGAAGA  100

seq1  GAGCAGATCTTGCCACCTCACATAGATAGATCTGTTATGAGCATATTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGATCTTGCCACCTCACATAGATAGATCTGTTATGAGCATATTGGG  150

seq1  AGTTGATAATTGGACTCATCCATGTGTATTAGTGTTGACAAAAGCAGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGATAATTGGACTCATCCATGTGTATTAGTGTTGACAAAAGCAGTTT  200

seq1  GAGGGTAATATTTTTGGAGTGGGTTAAGGAAACCACAGAGTTGAATTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTAATATTTTTGGAGTGGGTTAAGGAAACCACAGAGTTGAATTTGA  250

seq1  GTCTGATGAGATGGACAGTCTTATGAGGCTGTATTAGTCTCCAGGGTTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGATGAGATGGACAGTCTTATGAGGCTGTATTAGTCTCCAGGGTTAC  300

seq1  TAGGGTCAGACTAAATGGGAATGTGAGTTAGATTCTGTGGCTCACAGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTCAGACTAAATGGGAATGTGAGTTAGATTCTGTGGCTCACAGAGT  350

seq1  TACATTGTTCTGGGAATGTCCAGATCCTTGTGCTGAAGTAAAAATATTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTGTTCTGGGAATGTCCAGATCCTTGTGCTGAAGTAAAAATATTCA  400

seq1  GCAGACTAAAACTGGCAAACATTTAATCGATGCATAGACATATAGACAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACTAAAACTGGCAAACATTTAATCGATGCATAGACATATAGACAGA  450

seq1  AAGGGAGCAGGTAGATTCTTTAAGAGAGAGCTGATGATATTCCAGCAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGCAGGTAGATTCTTTAAGAGAGAGCTGATGATATTCCAGCAGGA  500

seq1  CAGGGATATTTGTATCATAGTTCACAGAAGTTACCTGACCTTATTTATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATATTTGTATCATAGTTCACAGAAGTTACCTGACCTTATTTATTT  550

seq1  TGCATTTTGTATTCTGTTTTGAACAGACAGAAAAGGGCAGCTCATAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTTGTATTCTGTTTTGAACAGACAGAAAAGGGCAGCTCATAATTT  600

seq1  TTATCAGTGGCTCGTGTAACTATATTTTTCCTCCATGAAACTAGATTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAGTGGCTCGTGTAACTATATTTTTCCTCCATGAAACTAGATTATA  650

seq1  GTGGTGTAGATCCTGTTAGCTCTAGTTGATTATAAAATACTACAGCTTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGTAGATCCTGTTAGCTCTAGTTGATTATAAAATACTACAGCTTAC  700

seq1  TCTATCAGGATCTG-AAAAACAGGGGAGTTTTTTTTTTTCATTTTTAGCC  749
      |||||||||||||| |||||||||||||||||||||||| ||||||||||
seq2  TCTATCAGGATCTGAAAAAACAGGGGAGTTTTTTTTTTTTATTTTTAGCC  750

seq1  TTTGCTTCTGTGTTGGGGTCCAGTCCTGTTTTTCTTTCTTATTGGTTCTT  799
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTTGCTTCTGTGTTGGGGTCCAGTCCTGTTTTTCTTTCTTATTGTTTCTT  800

seq1  TTTGAGGTAGCAGAGCAG-AAGAGCA-TTGCTGTGTGAGAATTGGTTTTA  847
      |||||||||||||||||| ||||||| |||||||||||||||||| ||||
seq2  TTTGAGGTAGCAGAGCAGAAAGAGCATTTGCTGTGTGAGAATTGGGTTTA  850

seq1  GAGGATGTTTAGGG-TTCTTGTATAATAATGTTTATTTATCATAAGTCTA  896
      |||||||||||||| |||||||||||||||| ||||||| |||||||  |
seq2  GAGGATGTTTAGGGTTTCTTGTATAATAATGGTTATTTACCATAAGTTCA  900

seq1  AGTCA  901
      |||||
seq2  AGTCA  905