BAC Information

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BAC

Clone NameB6Ng01-105B22
Chromosome4 (Build37)
Map Location 78,600,269 - 78,736,095
singlet/doubletdoublet
Overlap geneLOC100040026
Upstream geneLOC100039974, LOC100039996
Downstream geneLOC100040036, LOC667922
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105B22.bB6Ng01-105B22.g
ACCDH913226DH913227
length1,1021,068
definitionDH913226|Mus musculus domesticus DNA, BAC clone: B6Ng01-105B22, 5' end.DH913227|Mus musculus domesticus DNA, BAC clone: B6Ng01-105B22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(78,600,269 - 78,601,404)(78,735,017 - 78,736,095)
sequence
gaattctggggatttttggctaatatcctattattggtgagtatatacca
tgcctatgcatctgggttggagttaactcactcagaatgatactttctag
ctccatccatttgcttgcaaaactaatgaaaaatacatggcaatagaatt
tattaggataatatttgaatggctagacttatagaatgtactactattat
atacaggatggcttacccactaatactttgaggttgaacctcccaacttc
attttctctattttgaattaattttttaaaaagataatatgtatttggcc
tataaattcataggtaatatttcttaatctaatatttcctagtgtctctt
tacaaaacccaaacatgataccatgattctggaaaagcaagtaacggcac
agtgaacagctataaaatccatactcttggttgccagtgtgactctattt
ggaatcaactaaaactcaattatcttggcactcccttggaggactttttt
tcactttatcatttgaggtggaaagacccagccaaaatctaggtcacaca
ttctaacgatagcaaaagaaaaggaaatgatagaaaaaaagattttgctt
ttcaagtgcttgcctaactcttcctggtaagttcttttatcctgctaatg
tagaattccttctctaatgttagaacctacatcagtccttgagatctgat
caaggactcttggactcttggcatttcaattggaaaataggcattagagg
ggctggcccacaggctgtaagtacaaatattattctatcaattttgttaa
tcttaagaactctgggcaataaagtggcctttcttaaacatgaagaagta
cctcactactgcccaagggcttcatcctccaataaatgagggaaaaatgc
ttacaaagcagaatctgtctacacagaatctggtagtactttgttatata
aacagtagtgtagacacatatttttcacagagtatataatgatatagtca
tataaaaatatttataaatattatcatatcatatctattatgtgaaaaca
tgctatatgtttgtcttagtcatgattttttattctggccaaaacgtatg
ac
gaattcagtgtgatttaacagtccaataaaaaggagattctcctgtctga
atagcatgaaattgataggagtaatgaatgaattatctgtcatgacaggt
gtatttaatcttatccttggaagaccaagtctcagtcttctttgtgatag
tgtaaaaataggaaaatattaagcagatggagagacaaacaagtgttgat
cttgcattgtcctgatgatatagaaatattcaagcttgattcaagccctc
taattaaaatgacaaaaatcagcaaatacaaaactcaaaaatacaatgct
agacatcttaaacgatgaagtgtaacttcactcataaaaattggaaaata
cctgtgttttcagcattcaatgaacataaatgctataaatagatatagat
acatacacatatacacagaaaaggagagacacagagacatagaaacacta
aaatagagaagaaaagaaagacagacagaaagggagagatgaagacagag
acagagaaagacagagagagtgagacagaggaaaaacattgagacagaga
gaaagagaggtttgtttcatttcctctgtaccttcatatatcagtataaa
aaacagaaaaattaacaaattactgtcttgatggggctcaggaagatgaa
aatgacattcagagttaaaacatattatgtttaattttgccaatatatta
aataaagaaacaacatgttatttgaaatgtcaagcaattatttttgattg
cacagaaatctttatgaaagtgtaaagattggccactcctggcctgcacc
tccacctgaacctgtggcagcttgggtgagcattcatctatccctgaccc
cacagccttcctgtctcccaagaggtctgctataacaaggaatggaggtg
aaactcctgccccaatatccataccagctgagatgcccacagagcccagg
agtagtggatctactctgctctgtcagcatcattccttttctggtctgca
ctcactgactatgcaatcaataagctaccctccttcaagacactcaacta
tcttgatcccaggaagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_78600269_78601404
seq2: B6Ng01-105B22.b_47_1148

seq1  GAATTCTGGGGATTTTTGGCTAATATCCTATTATTGGTGAGTATATACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGGATTTTTGGCTAATATCCTATTATTGGTGAGTATATACCA  50

seq1  TGCCTATGCATCTGGGTTGGAGTTAACTCACTCAGAATGATACTTTCTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTATGCATCTGGGTTGGAGTTAACTCACTCAGAATGATACTTTCTAG  100

seq1  CTCCATCCATTTGCTTGCAAAACTAATGAAAAATACATGGCAATAGAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATCCATTTGCTTGCAAAACTAATGAAAAATACATGGCAATAGAATT  150

seq1  TATTAGGATAATATTTGAATGGCTAGACTTATAGAATGTACTACTATTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGGATAATATTTGAATGGCTAGACTTATAGAATGTACTACTATTAT  200

seq1  ATACAGGATGGCTTACCCACTAATACTTTGAGGTTGAACCTCCCAACTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGGATGGCTTACCCACTAATACTTTGAGGTTGAACCTCCCAACTTC  250

seq1  ATTTTCTCTATTTTGAATTAATTTTTTAAAAAGATAATATGTATTTGGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTCTATTTTGAATTAATTTTTTAAAAAGATAATATGTATTTGGCC  300

seq1  TATAAATTCATAGGTAATATTTCTTAATCTAATATTTCCTAGTGTCTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATTCATAGGTAATATTTCTTAATCTAATATTTCCTAGTGTCTCTT  350

seq1  TACAAAACCCAAACATGATACCATGATTCTGGAAAAGCAAGTAACGGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAACCCAAACATGATACCATGATTCTGGAAAAGCAAGTAACGGCAC  400

seq1  AGTGAACAGCTATAAAATCCATACTCTTGGTTGCCAGTGTGACTCTATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAACAGCTATAAAATCCATACTCTTGGTTGCCAGTGTGACTCTATTT  450

seq1  GGAATCAACTAAAACTCAATTATCTTGGCACTCCCTTGGAGGACTTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCAACTAAAACTCAATTATCTTGGCACTCCCTTGGAGGACTTTTTT  500

seq1  TCACTTTATCATTTGAGGTGGAAAGACCCAGCCAAAATCTAGGTCACACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTTATCATTTGAGGTGGAAAGACCCAGCCAAAATCTAGGTCACACA  550

seq1  TTCTAACGATAGCAAAAGAAAAGGAAATGATAGAAAAAAAGATTTTGCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAACGATAGCAAAAGAAAAGGAAATGATAGAAAAAAAGATTTTGCTT  600

seq1  TTCAAGTGCTTGCCTAACTCTTCCTGGTAAGTTCTTTTATCCTGCTAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGTGCTTGCCTAACTCTTCCTGGTAAGTTCTTTTATCCTGCTAATG  650

seq1  TAGAATTCCTTCTCTAATGTTAGAACCTACATCAGTCCTTGAGATCTGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTCCTTCTCTAATGTTAGAACCTACATCAGTCCTTGAGATCTGAT  700

seq1  CAAGGACTCTTGGACTCTTGGCATTTCAATTGGAAAATAGGCATTAGAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGACTCTTGGACTCTTGGCATTTCAATTGGAAAATAGGCATTAGAGG  750

seq1  GGCTGGCCCACAGGCTGTAAGTACAAAATATTATTCTATCAATTTTGTTA  800
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GGCTGGCCCACAGGCTGTAAGTAC-AAATATTATTCTATCAATTTTGTTA  799

seq1  ATCTTAAGAACTCTGGGCAATAAAGTGGCCTTTCTTAAACATGAAGAAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAAGAACTCTGGGCAATAAAGTGGCCTTTCTTAAACATGAAGAAGT  849

seq1  ACCTCACTACTGCCCAAGGGCTTCATCCTCCAATAAATGAGGGAAAAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCACTACTGCCCAAGGGCTTCATCCTCCAATAAATGAGGGAAAAATG  899

seq1  CTTACAAAAGCAGAATCTTGTCTACACAGAATCTGGTAGTACTTTGTTAT  950
      ||||| ||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTTAC-AAAGCAGAATC-TGTCTACACAGAATCTGGTAGTACTTTGTTAT  947

seq1  AATTAAACAAGTAGTGGTAGACACATAATTTTTTCAACAGAGTATTATAA  1000
      |  ||||| |||||| |||||||||||  |||||| |||||||| |||||
seq2  A--TAAAC-AGTAGT-GTAGACACATA--TTTTTC-ACAGAGTA-TATAA  989

seq1  ATTGATATAGTCATATAAAAATTATTTATAAAATAATTATT-TCATATCA  1049
        ||||||||||||||||||| ||||||||||     |||| ||||||||
seq2  --TGATATAGTCATATAAAAA-TATTTATAAA-----TATTATCATATCA  1031

seq1  TTAATTTCCTATTTATATGTTTAAATACATGCCTATATGTTTGTCTTAGT  1099
      |  ||   ||||   ||||  | || ||||| ||||||||||||||||||
seq2  T--AT---CTAT---TATG--TGAAAACATG-CTATATGTTTGTCTTAGT  1070

seq1  CATGATTTTTTTTTATTCTTGCACAAAACATTATGAC  1136
      |||||   ||||||||||| || ||||||  ||||||
seq2  CATGA---TTTTTTATTCTGGC-CAAAAC-GTATGAC  1102

seq1: chr4_78735017_78736095
seq2: B6Ng01-105B22.g_67_1134 (reverse)

seq1  GACTTCCTGGGGATC-AGATAGTTTGAGGTGTCCTGGAGGAGGGTAGGTT  49
      |||||||| |||||| |||||| |||| ||||| || ||||||||| | |
seq2  GACTTCCT-GGGATCAAGATAG-TTGA-GTGTCTTGAAGGAGGGTA-GCT  46

seq1  TATTGATTGGCATAGGTTCAGTTGGAGGTGCAGACCAGAAAAGGAATGAT  99
      |||||||| ||||||  |||||  || |||||||||||||||||||||||
seq2  TATTGATT-GCATAG--TCAGT--GA-GTGCAGACCAGAAAAGGAATGAT  90

seq1  GCTTGGACAGAGCAGGGTAGATCCCACTACTCCTGGGCTCTGTGGGCATC  149
      |||  |||||||||| |||||| |||||||||||||||||||||||||||
seq2  GCT--GACAGAGCAGAGTAGAT-CCACTACTCCTGGGCTCTGTGGGCATC  137

seq1  TCAGCTGGTATGGATATTGGGGCAGGAGTTTCACCTCCATTCCTTGTTAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTGGTATGGATATTGGGGCAGGAGTTTCACCTCCATTCCTTGTTAT  187

seq1  AGCAGACCTCTTGGGAGACAGGAAGGCTGTGGGGTCAGGGATAGATGAAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGACCTCTTGGGAGACAGGAAGGCTGTGGGGTCAGGGATAGATGAAT  237

seq1  GCTCA-CCAAGCTGCCACAGGTTCAGGTGGAGGTGCAGGCCAGGAGTGGC  298
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACCCAAGCTGCCACAGGTTCAGGTGGAGGTGCAGGCCAGGAGTGGC  287

seq1  CAATCTTTACACTTTCATAAAGATTTCTGTGCAATCAAAAATAATTGCTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTTTACACTTTCATAAAGATTTCTGTGCAATCAAAAATAATTGCTT  337

seq1  GACATTTCAAATAACATGTTGTTTCTTTATTTAATATATTGGCAAAATTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTCAAATAACATGTTGTTTCTTTATTTAATATATTGGCAAAATTA  387

seq1  AACATAATATGTTTTAACTCTGAATGTCATTTTCATCTTCCTGAGCCCCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAATATGTTTTAACTCTGAATGTCATTTTCATCTTCCTGAGCCCCA  437

seq1  TCAAGACAGTAATTTGTTAATTTTTCTGTTTTTTATACTGATATATGAAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGACAGTAATTTGTTAATTTTTCTGTTTTTTATACTGATATATGAAG  487

seq1  GTACAGAGGAAATGAAACAAACCTCTCTTTCTCTCTGTCTCAATGTTTTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGAGGAAATGAAACAAACCTCTCTTTCTCTCTGTCTCAATGTTTTT  537

seq1  CCTCTGTCTCACTCTCTCTGTCTTTCTCTGTCTCTGTCTTCATCTCTCCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTCTCACTCTCTCTGTCTTTCTCTGTCTCTGTCTTCATCTCTCCC  587

seq1  TTTCTGTCTGTCTTTCTTTTCTTCTCTATTTTAGTGTTTCTATGTCTCTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTCTGTCTTTCTTTTCTTCTCTATTTTAGTGTTTCTATGTCTCTG  637

seq1  TGTCTCTCCTTTTCTGTGTATATGTGTATGTATCTATATCTATTTATAGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTCCTTTTCTGTGTATATGTGTATGTATCTATATCTATTTATAGC  687

seq1  ATTTATGTTCATTGAATGCTGAAAACACAGGTATTTTCCAATTTTTATGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGTTCATTGAATGCTGAAAACACAGGTATTTTCCAATTTTTATGA  737

seq1  GTGAAGTTACACTTCATCGTTTAAGATGTCTAGCATTGTATTTTTGAGTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGTTACACTTCATCGTTTAAGATGTCTAGCATTGTATTTTTGAGTT  787

seq1  TTGTATTTGCTGATTTTTGTCATTTTAATTAGAGGGCTTGAATCAAGCTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTTGCTGATTTTTGTCATTTTAATTAGAGGGCTTGAATCAAGCTT  837

seq1  GAATATTTCTATATCATCAGGACAATGCAAGATCAACACTTGTTTGTCTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTTCTATATCATCAGGACAATGCAAGATCAACACTTGTTTGTCTC  887

seq1  TCCATCTGCTTAATATTTTCCTATTTTTACACTATCACAAAGAAGACTGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCTGCTTAATATTTTCCTATTTTTACACTATCACAAAGAAGACTGA  937

seq1  GACTTGGTCTTCCAAGGATAAGATTAAATACACCTGTCATGACAGATAAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGGTCTTCCAAGGATAAGATTAAATACACCTGTCATGACAGATAAT  987

seq1  TCATTCATTACTCCTATCAATTTCATGCTATTCAGACAGGAGAATCTCCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCATTACTCCTATCAATTTCATGCTATTCAGACAGGAGAATCTCCT  1037

seq1  TTTTATTGGACTGTTAAATCACACTGAATTC  1079
      |||||||||||||||||||||||||||||||
seq2  TTTTATTGGACTGTTAAATCACACTGAATTC  1068