BAC Information

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BAC

Clone NameB6Ng01-105E05
Chromosome4 (Build37)
Map Location 149,721,341 - 149,908,253
singlet/doubletdoublet
Overlap geneRere
Upstream geneUbe4b, Rbp7, LOC627985, Nmnat1, Lzic, Ctnnbip1, Clstn1, Pik3cd, D4Ertd429e, Slc25a33, Spsb1, H6pd, Gpr157, Slc2a5, LOC435818, Car6, LOC100041882, Eno1, LOC666880, LOC384091
Downstream geneSlc45a1, LOC677027, Errfi1, Park7, Tnfrsf9, Uts2, Per3, Vamp3, Camta1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105E05.bB6Ng01-105E05.g
ACCDH913334DH913335
length260991
definitionDH913334|Mus musculus domesticus DNA, BAC clone: B6Ng01-105E05, 5' end.DH913335|Mus musculus domesticus DNA, BAC clone: B6Ng01-105E05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(149,907,994 - 149,908,253)(149,721,341 - 149,722,333)
sequence
caggacagccagggctatacagagaaaccctgtcttgaaaaaccaaacat
gccaggcatggtggtacacgcctttaatcccagcatttgggaggcagagg
caggcggattactgagttcgaggccaccctggtctagagagtgagttcca
ggacagccaggactatacagaaaaaccctgtctcgaaaaaacaaacaaac
aaacaaaaccctgtctccccccctccaaaaaaaagagaaaaagaaaaatt
aaagcaacca
gaattcttttaaaactttttaaaagaaatgcaaattagaaaattctgttt
tgggtacagtcctttctcttttggcaagtatttttgacctttaataatag
taattgaaatattataggctttaataacaactactactaatccactaaaa
aggtcagcctacaatattagaatactgagcacttgtgtaattagaagagt
tttataattagtgtttaattatttcaaggctaagaacagtatcagaagga
gactctagagggcagtgcagctcagcgtattcgtcctcttgcctcttaag
ttttcatttggaaaaacaatccaggtatttgctttgggatcttcccacat
ggttttccaggtttttggaaatgtaagttttggaaagaagtgatctggtt
tgtcttaaaaagtttgttagataatacatcataatgatttgaccttagag
aatgactttgcctggtataaacacactgccatataaaagctgggattttt
attgactcgctcagttgaactgaatttgctttttgggcatttgtggaaca
aatgcaaaaggaagggaatagctggtgtttgcaagcctttcttaggtagg
aactaggcataccctctgctagaaactgacattttcaacaactgagtggg
aaattgtaaatgcccaatggattgatgtcttccagtgccaaatgttccag
agtttccttaggtattatgtgcactacattcagcagtatttcaaagggat
taaaccaatcactttcctctttaatttatttacctttaggggttaaacta
atgggtctcatatattgggcataggcaggtcttggacttaaattcttttt
tctttagcctcctgtatacctgcaattacatgtatgtgcccataggcctg
atctttccctcagagtcttaaaggtgtgtggtgtgttatccagggaattc
agtcatgcatcattgttgtaattatgttttctcctcttctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_149907994_149908253
seq2: B6Ng01-105E05.b_48_307 (reverse)

seq1  TGGTTGCTTTGATTTTTCTTTTTCTCTTTTTTTTGGGGGGGGGGAGACAG  50
      |||||||||| ||||||||||||||||||||||||| |||||||||||||
seq2  TGGTTGCTTTAATTTTTCTTTTTCTCTTTTTTTTGGAGGGGGGGAGACAG  50

seq1  GGTTTTGTTTGTTTGTTTGTTTTTTCGAGACAGGGTTTTTCTGTATAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTGTTTGTTTGTTTGTTTTTTCGAGACAGGGTTTTTCTGTATAGTC  100

seq1  CTGGCTGTCCTGGAACTCACTCTCTAGACCAGGGTGGCCTCGAACTCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGTCCTGGAACTCACTCTCTAGACCAGGGTGGCCTCGAACTCAGT  150

seq1  AATCCGCCTGCCTCTGCCTCCCAAATGCTGGGATTAAAGGCGTGTACCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCGCCTGCCTCTGCCTCCCAAATGCTGGGATTAAAGGCGTGTACCAC  200

seq1  CATGCCTGGCATGTTTGGTTTTTCAAGACAGGGTTTCTCTGTATAGCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTGGCATGTTTGGTTTTTCAAGACAGGGTTTCTCTGTATAGCCCT  250

seq1  GGCTGTCCTG  260
      ||||||||||
seq2  GGCTGTCCTG  260

seq1: chr4_149721341_149722333
seq2: B6Ng01-105E05.g_70_1060

seq1  GAATTCTTTTAAAACTTTTTAAAAGAAATGCAAATTAGAAAATTCTGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTAAAACTTTTTAAAAGAAATGCAAATTAGAAAATTCTGTTT  50

seq1  TGGGTACAGTCCTTTCTCTTTTGGCAAGTATTTTTGACCTTTAATAATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTACAGTCCTTTCTCTTTTGGCAAGTATTTTTGACCTTTAATAATAG  100

seq1  TAATTGAAATATTATAGGCTTTAATAACAACTACTACTAATCCACTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGAAATATTATAGGCTTTAATAACAACTACTACTAATCCACTAAAA  150

seq1  AGGTCAGCCTACAATATTAGAATACTGAGCACTTGTGTAATTAGAAGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAGCCTACAATATTAGAATACTGAGCACTTGTGTAATTAGAAGAGT  200

seq1  TTTATAATTAGTGTTTAATTATTTCAAGGCTAAGAACAGTATCAGAAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAATTAGTGTTTAATTATTTCAAGGCTAAGAACAGTATCAGAAGGA  250

seq1  GACTCTAGAGGGCAGTGCAGCTCAGCGTATTCGTCCTCTTGCCTCTTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTAGAGGGCAGTGCAGCTCAGCGTATTCGTCCTCTTGCCTCTTAAG  300

seq1  TTTTCATTTGGAAAAACAATCCAGGTATTTGCTTTGGGATCTTCCCACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATTTGGAAAAACAATCCAGGTATTTGCTTTGGGATCTTCCCACAT  350

seq1  GGTTTTCCAGGTTTTTGGAAATGTAAGTTTTGGAAAGAAGTGATCTGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTCCAGGTTTTTGGAAATGTAAGTTTTGGAAAGAAGTGATCTGGTT  400

seq1  TGTCTTAAAAAGTTTGTTAGATAATACATCATAATGATTTGACCTTAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTAAAAAGTTTGTTAGATAATACATCATAATGATTTGACCTTAGAG  450

seq1  AATGACTTTGCCTGGTATAAACACACTGCCATATAAAAGCTGGGATTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACTTTGCCTGGTATAAACACACTGCCATATAAAAGCTGGGATTTTT  500

seq1  ATTGACTCGCTCAGTTGAACTGAATTTGCTTTTTGGGCATTTGTGGAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACTCGCTCAGTTGAACTGAATTTGCTTTTTGGGCATTTGTGGAACA  550

seq1  AATGCAAAAGGAAGGGAATAGCTGGTGTTTGCAAGCCTTTCTTAGGTAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAAAAGGAAGGGAATAGCTGGTGTTTGCAAGCCTTTCTTAGGTAGG  600

seq1  AACTAGGCATACCCTCTGCTAGAAACTGACATTTTCAACAACTGAGT-GG  649
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AACTAGGCATACCCTCTGCTAGAAACTGACATTTTCAACAACTGAGTGGG  650

seq1  AAATTGTAAATGCCCAATGGATTGATGTCTTCCAGTGCCAAATGTTCCAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTAAATGCCCAATGGATTGATGTCTTCCAGTGCCAAATGTTCCAG  700

seq1  AG-TTCCTTAGGTATTATGTGCACTACATTCAGCAGTATTTCAAAGGTAT  748
      || |||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AGTTTCCTTAGGTATTATGTGCACTACATTCAGCAGTATTTCAAAGGGAT  750

seq1  TAAACCAATCAC-TTCCTCTTTAATTTATTTACCTTTAGGGGTTAAACTA  797
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TAAACCAATCACTTTCCTCTTTAATTTATTTACCTTTAGGGGTTAAACTA  800

seq1  AT-GGTCTCATATATT-GGCATAGGCAGGTCTTGGACTTAGAATTCTTTT  845
      || ||||||||||||| ||||||||||||||||||||||| |||||||||
seq2  ATGGGTCTCATATATTGGGCATAGGCAGGTCTTGGACTTA-AATTCTTTT  849

seq1  TTCCTTAGCCTCCTGTATACCTGCAATTACATGTATGTGCCAATAGGCCT  895
      ||| ||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTCTTTAGCCTCCTGTATACCTGCAATTACATGTATGTGCCCATAGGCCT  899

seq1  GATCTTTCCCTCAGAGTCTTAAAGGTGTGTGGTGTGTATATTCCAGGGAA  945
      ||||||||||||||||||||||||||||||||||||| || |||||||||
seq2  GATCTTTCCCTCAGAGTCTTAAAGGTGTGTGGTGTGT-TA-TCCAGGGAA  947

seq1  TTCTAGTCCATGCATCATTGTTGTTATTACTGTTTTCTTCCTCTTCTC  993
      ||| ||| |||||||||||||||| |||| ||||||| ||||||||||
seq2  TTC-AGT-CATGCATCATTGTTGTAATTA-TGTTTTC-TCCTCTTCTC  991