BAC Information

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BAC

Clone NameB6Ng01-105M07
Chromosome4 (Build37)
Map Location 150,600,192 - 150,718,573
singlet/doubletdoublet
Overlap geneCamta1
Upstream geneLOC100041882, Eno1, LOC666880, LOC384091, Rere, Slc45a1, LOC677027, Errfi1, Park7, Tnfrsf9, Uts2, Per3, Vamp3
Downstream geneLOC100041960, Dnajc11, Thap3, Phf13, Klhl21, Zbtb48, Tas1r1, Nol9, EG666980, Plekhg5, Tnfrsf25, Espn, LOC100043284, Hes2, Acot7, Gpr153, Hes3, Icmt, Rnf207, Rpl22, Chd5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105M07.bB6Ng01-105M07.g
ACCDH913698DH913699
length465557
definitionDH913698|Mus musculus domesticus DNA, BAC clone: B6Ng01-105M07, 5' end.DH913699|Mus musculus domesticus DNA, BAC clone: B6Ng01-105M07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,600,192 - 150,600,661)(150,718,011 - 150,718,573)
sequence
tcctccaggaggggaacctgagcactgcccttcatctccccagtgctgga
ttgaggaggaaacactcatagaatgtaggtgtagccacagagttgcctca
ttgaaggcacgatgatcttaggggcaggctctgggcccctccctcccaag
gctgtgagtgttcacctgtcatggagggccttggtcaatggaatcacctt
gctcagtgcctgcgtcctcctccccccccccccaaaataaactgatctgc
ggcctgaacaggtccactgagctccaaactttgccccctgtgaaaatctg
aagcatgcagctgggctggctgccccctccgctccctgatcctttaatct
gagactattaaaacttcattccacttctattggtaaaccatccatcactc
tcaccaagcagcgcagggctgtgggagcccagcgggagggcggcaggcag
agggaggggtaggca
ttagagcagatgttgtcctgtaagctcaagggccaagagtacctctgttt
ctgtaaggcagactaaaggactgtcttggttcatccccatagcctttggg
gtgcttggcccgtgtgggtagaaatgggattctggctcaatttggatatc
tctgtgtcagagggaaagtggttaattgtcctcccttcctggaggtgtag
gagaactgctgtcaggagaggaggtgaccaggacaagcagaaggtacttc
agggtgggcgtgcagagtcctacagagctgtggttagcagcctgcccaac
agtcagagagagccagctctgaggaaaagttcatctctggaaaggccatt
tcaacaaggaggcagcagccagttcacctcgatgtattgccagttctaat
ttcctatgggagttggggagtggggggctgtcccttgactgttggtgtgg
ggctgtgtctgagactggaaggcactcagcctccacccagggccacagtg
gcccttgctgttatacctgcccaccctcctcttcttgcctgagtcctata
tggccaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_150600192_150600661
seq2: B6Ng01-105M07.b_42_512

seq1  GAATTCTCCTCCAGGAGGGGAACCTGAGCACTGCCCTTCATCTCCCCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTCCAGGAGGGGAACCTGAGCACTGCCCTTCATCTCCCCAGT  50

seq1  GCTGGATTGAGGAGGAAACACTCATAGAATGTAGGTGTAGCCACAGAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGATTGAGGAGGAAACACTCATAGAATGTAGGTGTAGCCACAGAGTT  100

seq1  GCCTCATTGAAGGCACGATGATCTTAGGGGCAGGCTCTGGGCCCCTCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCATTGAAGGCACGATGATCTTAGGGGCAGGCTCTGGGCCCCTCCCT  150

seq1  CCCAAGGCTGTGAGTGTTCACCTGTCATGGAGGGCCTTGGTCAATGGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGGCTGTGAGTGTTCACCTGTCATGGAGGGCCTTGGTCAATGGAAT  200

seq1  CACCTTGCTCAGTGCCTGCGTCCTCCT-CCCCCCCCCCCAAAATAAACTG  249
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CACCTTGCTCAGTGCCTGCGTCCTCCTCCCCCCCCCCCCAAAATAAACTG  250

seq1  ATCTGCGGCCTGAACAGGTCCACTGAGCTCCAAACTTTGCCCCCTGTGAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCGGCCTGAACAGGTCCACTGAGCTCCAAACTTTGCCCCCTGTGAA  300

seq1  AATCTGAAGCATGCAGCTGGGCTGGCTGCCCCCTCCGCTCCCTGATCCTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGAAGCATGCAGCTGGGCTGGCTGCCCCCTCCGCTCCCTGATCCTT  350

seq1  TAATCTGAGACTATTAAAACTTCATTCCACTTCTATTGGTAAACCATCCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTGAGACTATTAAAACTTCATTCCACTTCTATTGGTAAACCATCCA  400

seq1  TCACTCTCACCAAGCAGCGCAGGGCTGTGGGAGCCCAGCGGGAGGGCGGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCTCACCAAGCAGCGCAGGGCTGTGGGAGCCCAGCGGGAGGGCGGC  450

seq1  AGGCAGAGGGAGGGGTAGGCA  470
      |||||||||||||||||||||
seq2  AGGCAGAGGGAGGGGTAGGCA  471

seq1: chr4_150718011_150718573
seq2: B6Ng01-105M07.g_67_629 (reverse)

seq1  TTGGCCCTATAGGACTCAGGCAAGAAGAGGAGGGTGGGCAGGTATAACAG  50
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCATATAGGACTCAGGCAAGAAGAGGAGGGTGGGCAGGTATAACAG  50

seq1  CAAGGGCCACTGTGGCCCTGGGTGGAGGCTGAGTGCCTTCCAGTCTCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGCCACTGTGGCCCTGGGTGGAGGCTGAGTGCCTTCCAGTCTCAGA  100

seq1  CACAGCCCCACACCAACAGTCAAGGGACAGCCCCCCACTCCCCAACTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCCCACACCAACAGTCAAGGGACAGCCCCCCACTCCCCAACTCCC  150

seq1  ATAGGAAATTAGAACTGGCAATACATCGAGGTGAACTGGCTGCTGCCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAAATTAGAACTGGCAATACATCGAGGTGAACTGGCTGCTGCCTCC  200

seq1  TTGTTGAAATGGCCTTTCCAGAGATGAACTTTTCCTCAGAGCTGGCTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGAAATGGCCTTTCCAGAGATGAACTTTTCCTCAGAGCTGGCTCTC  250

seq1  TCTGACTGTTGGGCAGGCTGCTAACCACAGCTCTGTAGGACTCTGCACGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTGTTGGGCAGGCTGCTAACCACAGCTCTGTAGGACTCTGCACGC  300

seq1  CCACCCTGAAGTACCTTCTGCTTGTCCTGGTCACCTCCTCTCCTGACAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCTGAAGTACCTTCTGCTTGTCCTGGTCACCTCCTCTCCTGACAGC  350

seq1  AGTTCTCCTACACCTCCAGGAAGGGAGGACAATTAACCACTTTCCCTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTCCTACACCTCCAGGAAGGGAGGACAATTAACCACTTTCCCTCTG  400

seq1  ACACAGAGATATCCAAATTGAGCCAGAATCCCATTTCTACCCACACGGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAGATATCCAAATTGAGCCAGAATCCCATTTCTACCCACACGGGC  450

seq1  CAAGCACCCCAAAGGCTATGGGGATGAACCAAGACAGTCCTTTAGTCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCACCCCAAAGGCTATGGGGATGAACCAAGACAGTCCTTTAGTCTGC  500

seq1  CTTACAGAAACAGAGGTACTCTTGGCCCTTGAGCTTACAGGACAACATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAGAAACAGAGGTACTCTTGGCCCTTGAGCTTACAGGACAACATCT  550

seq1  GCTCTAAGAATTC  563
      |||||||||||||
seq2  GCTCTAAGAATTC  563