BAC Information

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BAC

Clone NameB6Ng01-106G18
Chromosome4 (Build37)
Map Location 57,057,547 - 57,180,214
singlet/doubletdoublet
Overlap geneEpb4.1l4b
Upstream geneActl7b, Actl7a, Ikbkap, BC026590, Ctnnal1, D730040F13Rik, 6430704M03Rik
Downstream genePtpn3, LOC100041460, 1700042G15Rik, LOC100041342, LOC619973, LOC667049, Palm2, LOC100041513, Akap2, D630039A03Rik, Txn1, Txndc8, Svep1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106G18.bB6Ng01-106G18.g
ACCDH914167DH914168
length1,1741,059
definitionDH914167|Mus musculus domesticus DNA, BAC clone: B6Ng01-106G18, 5' end.DH914168|Mus musculus domesticus DNA, BAC clone: B6Ng01-106G18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,179,036 - 57,180,214)(57,057,547 - 57,058,610)
sequence
gaattctcagatctgaaggccagaccttgttgtggaacttgctgtacaag
ttctgtgcagagggactctagtggctatttgcccttatccaaagcacagg
gtcactagcaaacaagtcgctgacaagtagggacccagacaatactgagg
aggaggtgagggtaaagatccgagttcctgaggctggagttcccctccca
ctcattttgagatgatagagtgtctgccatagcccatggtcacttgaagc
cgcagtgactgggtatgtgtagaaaagaagtaaggggaagccctcagcaa
gtaagctatgatatgggcttactggtgtgtcatgatctatcccccaggga
tgaagatggcatagtctgtgacccttagactaaacaccgccccccaccat
ccatcttcccaggcaggtaccttcctgggcccagcatattttgtttgctc
atttgtgttgcagttacactaaaagtgcttccattaaagctagaatctta
gggagagcctgggttgtatgccagattagttaggtgaccaagaaaagcag
tggggttttcatagctggcaaaatctccggaactggaattcggatatcag
agtctcttagagtccccaggtgattcccatatggagccaaggtagagttc
cactggccttaaaacaagaatgaaagacagccaaggctttaatggatcag
tagtcctataaatttaatggccatatgtcctgtctgtacttaggtgtttt
attcctttagatcttactttaaaatgcattctgggccacaatttagaaag
ccatttagaggtctataaataagttatcatttcagcacttaagtttaatg
agggaaaaaaaatctctgttactttgtgccctgtgagtggcatctgctag
ggaagtatcccactggctgacatgcccaaggctactctttttttcactga
ccagacagatggacgtcctgaaagaatggaggaggtcagaagttccatca
agcaaaaattgtaagacagcaaatgtaaaacctgaaaggatgtgctggct
ggtggtagtagcacattgcctttgatcccaacacttgggagttgaggaaa
gttctctggacttgaatccaactgtctacaagtgagttccggaagcatgg
cttccagagaatataatttctcaa
gaattcagtggttcaccaagttggactttggtggtgtttgttactttggt
ctgttgttggatctctagctgggtaagtagacctttgtttgcatctctac
aggaacagtgtcacagtggaatgaattgggaacattctctgttcacatac
agggaccatcctgaagatgcaaacatggagttttgttggttatggatctg
cctaggagatttctcaaggcctcatcctcatgggtcatccttgcaggatc
ttggaagcatcattaacacaggctttgaagtaaatggtatccacaaggct
gtgcatctgcccgttaacctcagcaaagtcagactcacagtggatagact
caaaaacatgcagcaacattctagccttagggacatcggccaagggtcag
gatactaggccaactccaggctcactagagactgaggctcatggggtgtt
tgagattctgcaaagccacagtatttctagaatctaccaccagaattgtt
accaggacagggcaaggaaagggtgaggctggactcagggctttcttttg
aaaaggccaagtgaaggtgctcctgagaagctaatcacaacctttgcagt
gtacgcaagttttgggtgacacgggccctggggatctaagctgggataag
aaaccacagaaccttataatggagtcctcaataccctctggttctatagg
tttaaactcaggcagatgttaaagccactaggaaaactcttatatgctac
tggagggaatgtaagatggtttattcagtttggaaaaaaaaaaaaacaaa
aacaaaacagcctggtgggtctctcaaagagttaaagatatcattgcatg
gtccagcaatttacgccaagataagaatcccaggggaaaaaaagatccat
gaaaaacttgtacctgaatgctcattcagtattattcaataatcacgcaa
aggtagaagcaatcgagttcatccattacagatagtcaaatgtggtatca
ctacagtgggaattacaagccatgaaaagacgtggaacccaggatcatgt
ataatttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_57179036_57180214
seq2: B6Ng01-106G18.b_45_1218 (reverse)

seq1  TTGAGAAATTATTTTTCTTTGTAGCCCTGGCTGTCCCGGAACTCACTCTG  50
      |||||||||||| ||   | | |||| ||    | |||||||||||| ||
seq2  TTGAGAAATTATATTCTCTGGAAGCCATG---CTTCCGGAACTCACT-TG  46

seq1  TAGGCCAGGTTGGACTCAAAGTCAGAGAACCTCTCCTCTACCTCCCAAGT  100
      ||| |   |||||| ||||   ||||||| || ||||| | |||||||||
seq2  TAGAC--AGTTGGATTCAAGTCCAGAGAA-CTTTCCTC-AACTCCCAAGT  92

seq1  GTTGGGATCAAAGGCAATGTGCTACCTACCACCAGCCAGCACATCC-TTC  149
      |||||||||||||||||||||||| ||||||||||||||||||||| |||
seq2  GTTGGGATCAAAGGCAATGTGCTA-CTACCACCAGCCAGCACATCCTTTC  141

seq1  AGGTTTTACATTTGCTGTCTTTACATTTTTGCTTTGAT-GAAC-TCTGAC  197
      |||||||||||||||||||||   |||||||| ||||| |||| ||||||
seq2  AGGTTTTACATTTGCTGTCTTACAATTTTTGC-TTGATGGAACTTCTGAC  190

seq1  CTTCT-CATTCTTTCAGGACGTCCATCTGTCTGGTCAGTGGAAAAAAGAG  246
      || || |||||||||||||||||||||||||||||||||| |||||||||
seq2  CTCCTCCATTCTTTCAGGACGTCCATCTGTCTGGTCAGTGAAAAAAAGAG  240

seq1  TAGCCTTGGGCATGTCAGCCAGTGGGATACTTCCCTAGCAGATGCCACTC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTTGGGCATGTCAGCCAGTGGGATACTTCCCTAGCAGATGCCACTC  290

seq1  ACAGGGCAC-AAGTAACAGAGATTTTTTTTTCCCTCATTAAACTTAAGTG  345
      ||||||||| |||||||||||| |||||||||||||||||||||||||||
seq2  ACAGGGCACAAAGTAACAGAGA-TTTTTTTTCCCTCATTAAACTTAAGTG  339

seq1  CTGAAATGATAACTTATTTATAGACCTCTAAATGGCTTTCTAAATTGTGG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATGATAACTTATTTATAGACCTCTAAATGGCTTTCTAAATTGTGG  389

seq1  -CCAGAATGCATTTTAAAGTAAGATCTAAAGGAATAAAACACCTAAGTAC  444
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAATGCATTTTAAAGTAAGATCTAAAGGAATAAAACACCTAAGTAC  439

seq1  AGACAGGACATATGGCCATTAAATTTATAGGACTACTGATCCATTAAAGC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGACATATGGCCATTAAATTTATAGGACTACTGATCCATTAAAGC  489

seq1  CTTGGCTGTCTTTCATTCTTGTTTTAAGGCCAGTGGAACTCTACCTTGGC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTGTCTTTCATTCTTGTTTTAAGGCCAGTGGAACTCTACCTTGGC  539

seq1  TCCATATGGGAATCACCTGGGGACTCTAAGAGACTCTGATATCCGAATTC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATGGGAATCACCTGGGGACTCTAAGAGACTCTGATATCCGAATTC  589

seq1  CAGTTCCGGAGATTTTGCCAGCTATGAAAACCCCACTGCTTTTCTTGGTC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCCGGAGATTTTGCCAGCTATGAAAACCCCACTGCTTTTCTTGGTC  639

seq1  ACCTAACTAATCTGGCATACAACCCAGGCTCTCCCTAAGATTCTAGCTTT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAACTAATCTGGCATACAACCCAGGCTCTCCCTAAGATTCTAGCTTT  689

seq1  AATGGAAGCACTTTTAGTGTAACTGCAACACAAATGAGCAAACAAAATAT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAAGCACTTTTAGTGTAACTGCAACACAAATGAGCAAACAAAATAT  739

seq1  GCTGGGCCCAGGAAGGTACCTGCCTGGGAAGATGGATGGTGGGGGGCGGT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGCCCAGGAAGGTACCTGCCTGGGAAGATGGATGGTGGGGGGCGGT  789

seq1  GTTTAGTCTAAGGGTCACAGACTATGCCATCTTCATCCCTGGGGGATAGA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGTCTAAGGGTCACAGACTATGCCATCTTCATCCCTGGGGGATAGA  839

seq1  TCATGACACACCAGTAAGCCCATATCATAGCTTACTTGCTGAGGGCTTCC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGACACACCAGTAAGCCCATATCATAGCTTACTTGCTGAGGGCTTCC  889

seq1  CCTTACTTCTTTTCTACACATACCCAGTCACTGCGGCTTCAAGTGACCAT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACTTCTTTTCTACACATACCCAGTCACTGCGGCTTCAAGTGACCAT  939

seq1  GGGCTATGGCAGACACTCTATCATCTCAAAATGAGTGGGAGGGGAACTCC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTATGGCAGACACTCTATCATCTCAAAATGAGTGGGAGGGGAACTCC  989

seq1  AGCCTCAGGAACTCGGATCTTTACCCTCACCTCCTCCTCAGTATTGTCTG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCAGGAACTCGGATCTTTACCCTCACCTCCTCCTCAGTATTGTCTG  1039

seq1  GGTCCCTACTTGTCAGCGACTTGTTTGCTAGTGACCCTGTGCTTTGGATA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCTACTTGTCAGCGACTTGTTTGCTAGTGACCCTGTGCTTTGGATA  1089

seq1  AGGGCAAATAGCCACTAGAGTCCCTCTGCACAGAACTTGTACAGCAAGTT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAAATAGCCACTAGAGTCCCTCTGCACAGAACTTGTACAGCAAGTT  1139

seq1  CCACAACAAGGTCTGGCCTTCAGATCTGAGAATTC  1179
      |||||||||||||||||||||||||||||||||||
seq2  CCACAACAAGGTCTGGCCTTCAGATCTGAGAATTC  1174

seq1: chr4_57057547_57058610
seq2: B6Ng01-106G18.g_67_1125

seq1  GAATTCAGTGGTTCACCAAGTTGGACTTTGGTGGTGTTTGTTACTTTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGGTTCACCAAGTTGGACTTTGGTGGTGTTTGTTACTTTGGT  50

seq1  CTGTTGTTGGATCTCTAGCTGGGTAAGTAGACCTTTGTTTGCATCTCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGTTGGATCTCTAGCTGGGTAAGTAGACCTTTGTTTGCATCTCTAC  100

seq1  AGGAACAGTGTCACAGTGGAATGAATTGGGAACATTCTCTGTTCACATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACAGTGTCACAGTGGAATGAATTGGGAACATTCTCTGTTCACATAC  150

seq1  AGGGACCATCCTGAAGATGCAAACATGGAGTTTTGTTGGTTATGGATCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACCATCCTGAAGATGCAAACATGGAGTTTTGTTGGTTATGGATCTG  200

seq1  CCTAGGAGATTTCTCAAGGCCTCATCCTCATGGGTCATCCTTGCAGGATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGAGATTTCTCAAGGCCTCATCCTCATGGGTCATCCTTGCAGGATC  250

seq1  TTGGAAGCATCATTAACACAGGCTTTGAAGTAAATGGTATCCACAAGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGCATCATTAACACAGGCTTTGAAGTAAATGGTATCCACAAGGCT  300

seq1  GTGCATCTGCCCGTTAACCTCAGCAAAGTCAGACTCACAGTGGATAGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATCTGCCCGTTAACCTCAGCAAAGTCAGACTCACAGTGGATAGACT  350

seq1  CAAAAACATGCAGCAACATTCTAGCCTTAGGGACATCGGCCAAGGGTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACATGCAGCAACATTCTAGCCTTAGGGACATCGGCCAAGGGTCAG  400

seq1  GATACTAGGCCAACTCCAGGCTCACTAGAGACTGAGGCTCATGGGGTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTAGGCCAACTCCAGGCTCACTAGAGACTGAGGCTCATGGGGTGTT  450

seq1  TGAGATTCTGCAAAGCCACAGTATTTCTAGAATCTACCACCAGAATTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTCTGCAAAGCCACAGTATTTCTAGAATCTACCACCAGAATTGTT  500

seq1  ACCAGGACAGGGCAAGGAAAGGGTGAGGCTGGACTCAGGGCTTTCTTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGACAGGGCAAGGAAAGGGTGAGGCTGGACTCAGGGCTTTCTTTTG  550

seq1  AAAAGGCCAAGTGAAGGTGCTCCTGAGAAGCTAATCACAACCTTTGCAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGCCAAGTGAAGGTGCTCCTGAGAAGCTAATCACAACCTTTGCAGT  600

seq1  GTACGCAAGTTTTGGGTGACACGGGCCCTGGGGATCTAAGCTGGGATAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACGCAAGTTTTGGGTGACACGGGCCCTGGGGATCTAAGCTGGGATAAG  650

seq1  AAACCACAGAACCTTATAATGGAGTCCTCAATACCCTCTGGTTCTATAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCACAGAACCTTATAATGGAGTCCTCAATACCCTCTGGTTCTATAGG  700

seq1  TTTAAACTCAGGCAGATGTTAAAGCCACTAGGAAAACTCTTATATGCTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACTCAGGCAGATGTTAAAGCCACTAGGAAAACTCTTATATGCTAC  750

seq1  TGGAGGGAATGTAAGATGGTTTATTCAGTTTGGAAAAAAAAAAAAAACAA  800
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGGAGGGAATGTAAGATGGTTTATTCAGTTTGG-AAAAAAAAAAAAACAA  799

seq1  AAACAAAACAGCCTGGTGGGTC-CTCAAAGAGTTAAAGATATCATTGCAT  849
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAACAAAACAGCCTGGTGGGTCTCTCAAAGAGTTAAAGATATCATTGCAT  849

seq1  GGTCCAGCAATTTACGCCAAGATAAGAAT-CCAAGGGAAAAAAAGATCCA  898
      ||||||||||||||||||||||||||||| ||| ||||||||||||||||
seq2  GGTCCAGCAATTTACGCCAAGATAAGAATCCCAGGGGAAAAAAAGATCCA  899

seq1  TGAAAAACTTGTACCTGAATGCTCATTCAGTATTATTC-ATAATCACGCA  947
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGAAAAACTTGTACCTGAATGCTCATTCAGTATTATTCAATAATCACGCA  949

seq1  AAGGTAGAAGCAATCGAGTTCATCCATTAACAGATAGTCAAAATGTGGTT  997
      |||||||||||||||||||||||||||| |||||||||| |||||||| |
seq2  AAGGTAGAAGCAATCGAGTTCATCCATT-ACAGATAGTC-AAATGTGG-T  996

seq1  ATCACTACAGTGGGAAATTACAAAGCCATGAAAAAGACGTGAACCCCAGG  1047
      |||||||||||||| |||||| |||||||| |||||||||| | ||||||
seq2  ATCACTACAGTGGG-AATTAC-AAGCCATG-AAAAGACGTGGAACCCAGG  1043

seq1  ATCATGTTATAATTTAA  1064
      |||||| ||||||||||
seq2  ATCATG-TATAATTTAA  1059