BAC Information

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BAC

Clone NameB6Ng01-108E24
Chromosome4 (Build37)
Map Location 94,164,285 - 94,418,229
singlet/doubletdoublet
Overlap gene5830433M19Rik, Plaa, LOC667250, Lrrc19, Ift74, Tek
Upstream genenone
Downstream gene4930579C15Rik, LOC100039252, Mysm1, LOC100039265, LOC665029, Jun, LOC100042411, 2310009E04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108E24.bB6Ng01-108E24.g
ACCDH915529DH915530
length590139
definitionDH915529|Mus musculus domesticus DNA, BAC clone: B6Ng01-108E24, 5' end.DH915530|Mus musculus domesticus DNA, BAC clone: B6Ng01-108E24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,417,635 - 94,418,229)(94,164,285 - 94,164,423)
sequence
aaggattccatgattttccagcagttaatagttgcttgagcaaaggattc
acacagccctacctaccatggagagctaaggacagttcatggttgctgaa
gcaaggaagagacatcttctctaatcacatagctacttgtaagttgcctg
tgctcctataaatagatgctcacccaggatcctgtaagtgacctaattaa
agtcatagggtcacaatgccagagtatatgaaagcaggaacaagcccaaa
ttcaaaaagagatcactgcgggttgggtggggggacaagagggtgtgggg
cattgggctctgcacagacaggctggtctctagttgagctgaggtctgaa
ccctggaaatggtgataattcacctaaatgacacggtaggtggtgttccc
ttatgctcctgcaacttatgcttaggcccctgcctaagttaccgcccctc
acagcccccacaagagaagcatggtcagtagtcaagcttctgaccttcag
gctaaactcctccctagttacctagcaacagtaaagaccctaaaaagggc
tgttcagccccacctcactctcttacatcttactttatct
actaaataagaaatggtctgtgtgaagatggcctagtcagccatcagtgg
aaagagaggcccattggtcttgcaaactttatatgccccagtacagggga
acgccagggccaagaagtgggagtgggtgggtaggggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_94417635_94418229
seq2: B6Ng01-108E24.b_44_639 (reverse)

seq1  AGAT-AAGTAAGATGTAAGAGAGTGAGGTGGGGCTGAACAGCCCTTTTTA  49
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAAGTAAGATGTAAGAGAGTGAGGTGGGGCTGAACAGCCCTTTTTA  50

seq1  GGGTCTTTACTGTTGCTAGGTAACTGGGGAGGAGTTTAGCCTGAAGGTCA  99
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GGGTCTTTACTGTTGCTAGGTAACTAGGGAGGAGTTTAGCCTGAAGGTCA  100

seq1  GAAGCTTGACTACTGACCATGCTTCTCTTGTGGGGGCTGTGAGGGGCGGT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTTGACTACTGACCATGCTTCTCTTGTGGGGGCTGTGAGGGGCGGT  150

seq1  AACTTAGGCAGGGGCCTAAGCATAAGTTGCAGGAGCATAAGGGAACACCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAGGCAGGGGCCTAAGCATAAGTTGCAGGAGCATAAGGGAACACCA  200

seq1  CCTACCGTGTCATTTAGGTGAATTATCACCATTTCCAGGGTTCAGACCTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCGTGTCATTTAGGTGAATTATCACCATTTCCAGGGTTCAGACCTC  250

seq1  AGCTCAACTAGAGACCAGCCTGTCTGTGCAGAGCCCAATGCCCCACACCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAACTAGAGACCAGCCTGTCTGTGCAGAGCCCAATGCCCCACACCC  300

seq1  TCTTGTCCCCCCACCCAACCCGCAGTGATCTCTTTTTGAATTTGGGCTTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTCCCCCCACCCAACCCGCAGTGATCTCTTTTTGAATTTGGGCTTG  350

seq1  TTCCTGCTTTCATATACTCTGGCATTGTGACCCTATGACTTTAATTAGGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGCTTTCATATACTCTGGCATTGTGACCCTATGACTTTAATTAGGT  400

seq1  CACTTACAGGATCCTGGGTGAGCATCTATTTATAGGAGCACAGGCAACTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTACAGGATCCTGGGTGAGCATCTATTTATAGGAGCACAGGCAACTT  450

seq1  ACAAGTAGCTATGTGATTAGAGAAGATGTCTCTTCCTTGCTTCAGCAACC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTAGCTATGTGATTAGAGAAGATGTCTCTTCCTTGCTTCAGCAACC  500

seq1  ATGAACTGTCCTTAGCTCTCCATGGTAGGTAGGGCTGTGTGAATCCTTTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTGTCCTTAGCTCTCCATGGTAGGTAGGGCTGTGTGAATCCTTTG  550

seq1  CTCAAGCAACTATTAACTGCTGGAAAATCATGGAATCCTTGAATTC  595
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGCAACTATTAACTGCTGGAAAATCATGGAATCCTTGAATTC  596

seq1: chr4_94164285_94164423
seq2: B6Ng01-108E24.g_71_209

seq1  ACTAAATAAGAAATGGTCTGTGTGAAGATGGCCTAGTCAGCCATCAGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAATAAGAAATGGTCTGTGTGAAGATGGCCTAGTCAGCCATCAGTGG  50

seq1  AAAGAGAGGCCCATTGGTCTTGCAAACTTTATATGCCCCAGTACAGGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAGGCCCATTGGTCTTGCAAACTTTATATGCCCCAGTACAGGGGA  100

seq1  ACGCCAGGGCCAAGAAGTGGGAGTGGGTGGGTAGGGGAG  139
      |||||||||||||||||||||||||||||||||||||||
seq2  ACGCCAGGGCCAAGAAGTGGGAGTGGGTGGGTAGGGGAG  139