BAC Information

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BAC

Clone NameB6Ng01-109F23
Chromosome4 (Build37)
Map Location 70,271,893 - 70,272,823
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC622491, LOC433716, LOC100039888, LOC242497, LOC671064, Cdk5rap2, Megf9
Downstream geneLOC100039565, LOC100039979
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-109F23.bB6Ng01-109F23.g
ACCDH916298DH916299
length1,163936
definitionDH916298|Mus musculus domesticus DNA, BAC clone: B6Ng01-109F23, 5' end.DH916299|Mus musculus domesticus DNA, BAC clone: B6Ng01-109F23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagatgcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgagagc
agatgctggtgaggatgtggagaaagaggaacactcctccattggtggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggaggatcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatacaatttcctaaacacatgaaactcaagaaaaatg
aagactgaagtgtggacactatgcccctccttagaagtgggaacaaaaca
cccttggaaggagttacagagacaaagtttggagctgagatgaaaggatg
gaccatgtagagactgccatatccagggatccaccccataatcagcatcc
aaacgctgacaccattgcatacactagcaagattttatcgaaaggaccca
gatgtagctgtcccttgtgagactatgccggggcctagcaaacacagaag
tggatgctcacagtcagctattggatggatcacagggctcccaatggaga
gctagagaaagtacccaagtgctaaagggatctgcactcttatagtggaa
caacattatgaactaaacagtaccctggagcctcttaactctactgcata
ttgtatcaaaagatggcctagtggctcactggaagagaggtccaattgac
tgcaaaccttaattgctctagtccggtaacgtccagtgctcaaaggtgga
ggtggggtgtgta
gaattctaggaagagaaactcccaggaaactatgagagtggtcatagcta
agacttctaacaatagaggatacagaacctgaaatggctacctcctgtaa
ccaggtaagacgtctaatggaaggatggggataccaacccatccttaaaa
cttttgaaccacaatttttcccgactacaagacattcagggataaagatg
gaacaaaaattaagggaatggctcacaaatgatgagcccaaattgagaca
cacaacatgagagagagcccacccttgacactactaatgatattatcttg
tacttgctgacaggaacctagcatagctgtcctctgagaagctttaccca
gcagctgatggaaacggatgctgtagagccatgaggggttgaggtgtgtg
caaattctggaaatctcatactgagactggtaggaataggagtgctcccc
ttgccctgccctgggcctgcataccctaccccatgaagtgctgtgctcta
cctttgccactcagaggaggtcacatagcctggcagcctgagtggatttt
ctctccttataagattatgtcaggcaatatctgaaattcttccctatgca
tatgaggcatcctcattgccctagccaccagatttgtactctctctgaag
accccctactcactccccaaaggttcaatgttttgttctcccaatgaaat
gaactacctcactgaaagcttttctccagagtctgttctcagcatactca
ctcactgtctgggggctccattttctacctaattcttcttgtcaggaacc
actgggttgtaatttcaggcagtcataccattccagggtggtaaagaaag
tctgggaacataaccatgcagaggacccacagccaacactaggcagaact
cagggaatcttgtgggagatggggaagggaggattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_70271893_70272823
seq2: B6Ng01-109F23.g_66_1001

seq1  GAATTCTAGGAAGAGAAACTCCCAGGAAACTATGAGAGTGGTCATAGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGAAGAGAAACTCCCAGGAAACTATGAGAGTGGTCATAGCTA  50

seq1  AGACTTCTAACAATAGAGGATACAGAACCTGAAATGGCTACCTCCTGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTCTAACAATAGAGGATACAGAACCTGAAATGGCTACCTCCTGTAA  100

seq1  CCAGGTAAGACGTCTAATGGAAGGATGGGGATACCAACCCATCCTTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTAAGACGTCTAATGGAAGGATGGGGATACCAACCCATCCTTAAAA  150

seq1  CTTTTGAACCACAATTTTTCCCGACTACAAGACATTCAGGGATAAAGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGAACCACAATTTTTCCCGACTACAAGACATTCAGGGATAAAGATG  200

seq1  GAACAAAAATTAAGGGAATGGCTCACAAATGATGAGCCCAAATTGAGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAAAATTAAGGGAATGGCTCACAAATGATGAGCCCAAATTGAGACA  250

seq1  CACAACATGAGAGAGAGCCCACCCTTGACACTACTAATGATATTATCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACATGAGAGAGAGCCCACCCTTGACACTACTAATGATATTATCTTG  300

seq1  TACTTGCTGACAGGAACCTAGCATAGCTGTCCTCTGAGAAGCTTTACCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGCTGACAGGAACCTAGCATAGCTGTCCTCTGAGAAGCTTTACCCA  350

seq1  GCAGCTGATGGAAACGGATGCTGTAGAGCCATGAGGGGTTGAGGTGTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTGATGGAAACGGATGCTGTAGAGCCATGAGGGGTTGAGGTGTGTG  400

seq1  CAAATTCTGGAAATCTCATACTGAGACTGGTAGGAATAGGAGTGCTCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTCTGGAAATCTCATACTGAGACTGGTAGGAATAGGAGTGCTCCCC  450

seq1  TTGCCCTGCCCTGGGCCTGCATACCCTACCCCATGAAGTGCTGTGCTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCTGCCCTGGGCCTGCATACCCTACCCCATGAAGTGCTGTGCTCTA  500

seq1  CCTTTGCCACTCAGAGGAGGTCACATAGCCTGGCAGCCTGAGTGGATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGCCACTCAGAGGAGGTCACATAGCCTGGCAGCCTGAGTGGATTTT  550

seq1  CTCTCCTTATAAGATTATGTCAGGCAATATCTGAAATTCTTCCCTATGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTTATAAGATTATGTCAGGCAATATCTGAAATTCTTCCCTATGCA  600

seq1  TATGAGGCATCCTCATTGCCCTAGCCACCAGATTTGTACTCTCTCTGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGGCATCCTCATTGCCCTAGCCACCAGATTTGTACTCTCTCTGAAG  650

seq1  ACCCCCTACTCACTCCCCAAAGGTTCAATGTTTTGTTCTCCCAATGAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCTACTCACTCCCCAAAGGTTCAATGTTTTGTTCTCCCAATGAAAT  700

seq1  GAACTACCTCACTG-AAGCTTTTCTCCAGAGTCTGTTCTCAGCATACTCA  749
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GAACTACCTCACTGAAAGCTTTTCTCCAGAGTCTGTTCTCAGCATACTCA  750

seq1  CTCACTGTCTGGGGGCTCCATTTTCTACCTAATTCTTCTTGTCAGGAACC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGTCTGGGGGCTCCATTTTCTACCTAATTCTTCTTGTCAGGAACC  800

seq1  ACT-GGTTGTAATTTCAGGCAGTCATACCATTCCA-GGTGGTAAAG-AAG  846
      ||| ||||||||||||||||||||||||||||||| |||||||||| |||
seq2  ACTGGGTTGTAATTTCAGGCAGTCATACCATTCCAGGGTGGTAAAGAAAG  850

seq1  TCTGGGAACAATACCATGCAGA-GACCCACAGCCAAACACTAGGCAGAAC  895
      ||||||||||  |||||||||| ||||||||||| |||||||||||||||
seq2  TCTGGGAACATAACCATGCAGAGGACCCACAGCC-AACACTAGGCAGAAC  899

seq1  TCAGGGAATCTTGTGGGAGATGGGG-AGGGAGGATTG  931
      ||||||||||||||||||||||||| |||||||||||
seq2  TCAGGGAATCTTGTGGGAGATGGGGAAGGGAGGATTG  936