BAC Information

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BAC

Clone NameB6Ng01-109P02
Chromosome4 (Build37)
Map Location 54,121,480 - 54,122,388
singlet/doubletsinglet
Overlap genenone
Upstream geneAbca1, 4930522O17Rik, AI427809, LOC100041197, Slc44a1, Fsd1l, LOC666483, Fcmd, Tal2, LOC435784, Tmem38b, LOC670124, LOC100041280
Downstream geneLOC666901, LOC100041303, LOC384018, EG666920, Zfp462
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-109P02.bB6Ng01-109P02.g
ACCDH916709DH916710
length9171,158
definitionDH916709|Mus musculus domesticus DNA, BAC clone: B6Ng01-109P02, 5' end.DH916710|Mus musculus domesticus DNA, BAC clone: B6Ng01-109P02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcattttcaacacagtctgggccctttccaaacctactcatag
gattcgaaactactgtctattcattcgtttggcaactattgacccaaaag
ttggcattttataggcagtaaggatatagaactttctctcctggagtaat
gaaatagcaaattgagcagaaaatgagcatgaacatgaaaacacaaaaca
cagagacagagggaagcagagagtgctgtgacggccaggcgcagaaatac
ctgtaaggaccagatcacattatgagttctatgtgcttcttgctctattt
gacactcctatccagcctctgcaccatgacttcactgtttccaacatgcc
tgggaaactgaggtaccaagccagtgtgtttacttgcccaggagctgaac
aaatgatagctcgtggacttgaaattagatggtcaggttctcctgtccat
ccttttagcctttgaatctctgggatagggtaactgtcaggttattttca
tagacaagaaggtcactgggggactctttgaaaagaaggtatttagcctg
aggcttccagacaaagaaggagcacttcacacatacataactaaaggaaa
gaaggagtcaggcatgcatttggtgagagccagcagcctggagaaaggcc
tcagtgtacatgaaaaatgggaggagcatcaacacttctgtaccacagtg
caagagagagagagagagagagagagagagagagagagagagagagagag
agagagagagagaaagggcccaggaggatgggccaggcttcagagattgg
gcaaatgaaagggaaatcctaactgggttctaagaagccacgggggagcc
agagtcagttttcccttttacaaatctctctgtgggaaatgtgtgggaaa
ttggatcaagggttcgc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcacaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gtttatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagaagattttatcgaaag
gacccagatgtagcttttctcttgtgagactatgcccgggccctagcaaa
cacagaagtggatgctcacagtcagctaatggatgatcataggctcccaa
tggagagctagagaaagtagcaagagctaaagggatctgcaccctatagg
tgacacatatgactacagtacccgggctcttgactcttagctgcatatat
atcaaagatggctagtccggcatcactgaagagagcccattgaacttgcc
accttttatatgcccgagtacaaggtaacaccaaggcataaggggtgatg
attgcgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_54121480_54122388
seq2: B6Ng01-109P02.b_47_963

seq1  GAATTCAGCATTTTCAACACAGTCTGGGCCCTTTCCAAACCTACTCATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCATTTTCAACACAGTCTGGGCCCTTTCCAAACCTACTCATAG  50

seq1  GATTCGAAACTACTGTCTATTCATTCGTTTGGCAACTATTGACCCAAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCGAAACTACTGTCTATTCATTCGTTTGGCAACTATTGACCCAAAAG  100

seq1  TTGGCATTTTATAGGCAGTAAGGATATAGAACTTTCTCTCCTGGAGTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCATTTTATAGGCAGTAAGGATATAGAACTTTCTCTCCTGGAGTAAT  150

seq1  GAAATAGCAAATTGAGCAGAAAATGAGCATGAACATGAAAACACAAAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGCAAATTGAGCAGAAAATGAGCATGAACATGAAAACACAAAACA  200

seq1  CAGAGACAGAGGGAAGCAGAGAGTGCTGTGACGGCCAGGCGCAGAAATAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACAGAGGGAAGCAGAGAGTGCTGTGACGGCCAGGCGCAGAAATAC  250

seq1  CTGTAAGGACCAGATCACATTATGAGTTCTATGTGCTTCTTGCTCTATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAGGACCAGATCACATTATGAGTTCTATGTGCTTCTTGCTCTATTT  300

seq1  GACACTCCTATCCAGCCTCTGCACCATGACTTCACTGTTTCCAACATGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTCCTATCCAGCCTCTGCACCATGACTTCACTGTTTCCAACATGCC  350

seq1  TGGGAAACTGAGGTACCAAGCCAGTGTGTTTACTTGCCCAGGAGCTGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAACTGAGGTACCAAGCCAGTGTGTTTACTTGCCCAGGAGCTGAAC  400

seq1  AAATGATAGCTCGTGGACTTGAAATTAGATGGTCAGGTTCTCCTGTCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATAGCTCGTGGACTTGAAATTAGATGGTCAGGTTCTCCTGTCCAT  450

seq1  CCTTTTAGCCTTTGAATCTCTGGGATAGGGTAACTGTCAGGTTATTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTAGCCTTTGAATCTCTGGGATAGGGTAACTGTCAGGTTATTTTCA  500

seq1  TAGACAAGAAGGTCACTGGGGGACTCTTTGAAAAGAAGGTATTTAGCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAAGAAGGTCACTGGGGGACTCTTTGAAAAGAAGGTATTTAGCCTG  550

seq1  AGGCTTCCAGACAAAGAAGGAGCACTTCACACATACATAACTAAAGGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTCCAGACAAAGAAGGAGCACTTCACACATACATAACTAAAGGAAA  600

seq1  GAAGGAGTCAGGCATGCATTTGGTGAGAGCCAGCAGCCTGGAGAAAGGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGTCAGGCATGCATTTGGTGAGAGCCAGCAGCCTGGAGAAAGGCC  650

seq1  TCAGTGTACATGAAAAATGGGAGGAGCATCAACACTTCTGTACCACAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTACATGAAAAATGGGAGGAGCATCAACACTTCTGTACCACAGTG  700

seq1  CAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  750

seq1  AGAGAGAGAGAGAAA-GGCCCAGGAGGATGGGCCAGGCTTCAGAGATTTG  799
      ||||||||||||||| |||||||||||||||||||||||||||||||| |
seq2  AGAGAGAGAGAGAAAGGGCCCAGGAGGATGGGCCAGGCTTCAGAGATTGG  800

seq1  GCAAATGAA--GGGAATCCT-ACTGTGTTCTAAG-AGCCAC-GGGGAGCC  844
      |||||||||  || |||||| |||| |||||||| |||||| ||||||||
seq2  GCAAATGAAAGGGAAATCCTAACTGGGTTCTAAGAAGCCACGGGGGAGCC  850

seq1  AGAGTCAGTTTT-CCTTTTACAAATCTCTCTGTGGCAGATGTGT-GGAGA  892
      |||||||||||| |||||||||||||||||||||| | |||||| ||| |
seq2  AGAGTCAGTTTTCCCTTTTACAAATCTCTCTGTGGGAAATGTGTGGGAAA  900

seq1  ATGGATCAAGGGTTCGC  909
       ||||||||||||||||
seq2  TTGGATCAAGGGTTCGC  917