BAC Information

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BAC

Clone NameB6Ng01-110H14
Chromosome4 (Build37)
Map Location 24,274,512 - 24,357,354
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC625462, LOC383998, LOC100040464, LOC623873, LOC664973
Downstream geneF730047E07Rik, Klhl32, 1110007M04Rik, C230012O17Rik, Gpr63, Fhl5, 1810074P20Rik, Prdx6-rs2, LOC665019
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-110H14.bB6Ng01-110H14.g
ACCDH917087DH917088
length9851,028
definitionDH917087|Mus musculus domesticus DNA, BAC clone: B6Ng01-110H14, 5' end.DH917088|Mus musculus domesticus DNA, BAC clone: B6Ng01-110H14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(24,274,512 - 24,275,161)(24,356,310 - 24,357,354)
sequence
gaattcaatatttatagccacaaaaatactgatttctctgccttattcaa
tgatagaccattgataggcatttatatagcttttatcctatgccctatta
catttgggaaaagtgtcctccatttcttaaatgattttatgattaaaagg
ttataactttagctgtttctcaataaattctagctcataagcccttcttt
cctccctttccccacttgatccttccattccagttccccatccccacact
tccatttgtatttatctgttctactgcttttgcccaaaaagctctacctg
ttttctctagaaccttactcgatacatatccttttgtggttctataggta
agagttaatagttatatataagtgaatacatagtaatatttgtctctctg
ggtctgagtgatctcattcagagtaatttttcctagttccatctagttgc
ttgcaaattttatgatgtcatttttttaatgactgaggaatactccattg
tgtaaatgtatcacattttctttaaccattcttctaataaggaacatgta
gattgtttccaatctctggttattatgaatagagcaacaatggacatggt
caagcaagtgtttctgtgctgggaagagacaactaaaatgaaggggcatt
tgaagagtactatagaaacctaatacagtagaaacttcccagaaatatac
atatatgaatgtgagtcccaactggcattggttatcaccaaatgaaaatt
ataatacttagattgagttgcattcaattagattgtcatccaaagtggac
ccactggaatgccccaaacaacccaagctctctccaaactgtcaacaagg
cctcacggctgaagacacacctacatcactcattgacattggacatcaag
tagtgtctatatacagccttcatccctttgttccttggacactcaacttt
attagatgtcttagcaaatccctcccctcagagct
gaattcctagagctgggttactctgtcaatgatgtatatgctgtttgttt
ttagggaaaatgtttggtttaagagctcactaatgccatcatcacccacc
agtggcaacaatggtgttgttcagactctcaaaaaaactttgcaaaagac
agtgagctacagatgcatgtgttatatttttagctcacatacaaatatta
taactcgtattaaaacaataggattttttttaacagagaaggaatgaatg
ctgcataattaagtacagtatttaatttggctgttgtgaagcaaaagaat
aaggtaataatttttattgtactaatcagtctcaagatgttctctgtgtt
aattgggttaaaaaaattgcagtacttattagaaattctaatttcacaat
gcagtgctgacaataggcgcagccagtgaattattcacatctttaatttg
ctcacttaatgacagtgttctgtaatcagagtgcagggactgctgcctat
gcattatgtatgatgctcaggacttaaatgcaggacattatgaagctctc
agtggttcagtaattagttttccacaagacaggatttagatattcacaga
taaaagtccaccattggataatgccaaggttgcacaacacaaaataacag
agggaaggaagctcaaagtttagccgaaaacttcatctctagagcttgtc
cagcagggagacagaatcacgttcccttaaatagttgcctagctctgatc
acatgtttgaaaactgttttcgaacaaagttgtagcagcgagacatttga
caatttcagtgaaccagaggggaaagataaaacctttttaattagtgttc
atagaagctccgcattacatcctcctaaccagtctgtggtgtgcatagca
ggcaccctcagtgcgctttgtatttagtagtgcaaatgcaaatcagtaca
atggtgttgctgtgatgtgtttgtaaaaggtacatgcccaaatgaaatgg
agctgctgatggtttgtcatacgtctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_24274512_24275161
seq2: B6Ng01-110H14.b_43_692

seq1  GAATTCAATATTTATAGCCACAAAAATACTGATTTCTCTGCCTTATTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATATTTATAGCCACAAAAATACTGATTTCTCTGCCTTATTCAA  50

seq1  TGATAGACCATTGATAGGCATTTATATAGCTTTTATCCTATGCCCTATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGACCATTGATAGGCATTTATATAGCTTTTATCCTATGCCCTATTA  100

seq1  CATTTGGGAAAAGTGTCCTCCATTTCTTAAATGATTTTATGATTAAAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGGAAAAGTGTCCTCCATTTCTTAAATGATTTTATGATTAAAAGG  150

seq1  TTATAACTTTAGCTGTTTCTCAATAAATTCTAGCTCATAAGCCCTTCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAACTTTAGCTGTTTCTCAATAAATTCTAGCTCATAAGCCCTTCTTT  200

seq1  CCTCCCTTTCCCCACTTGATCCTTCCATTCCAGTTCCCCATCCCCACACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTTTCCCCACTTGATCCTTCCATTCCAGTTCCCCATCCCCACACT  250

seq1  TCCATTTGTATTTATCTGTTCTACTGCTTTTGCCCAAAAAGCTCTACCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTGTATTTATCTGTTCTACTGCTTTTGCCCAAAAAGCTCTACCTG  300

seq1  TTTTCTCTAGAACCTTACTCGATACATATCCTTTTGTGGTTCTATAGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCTAGAACCTTACTCGATACATATCCTTTTGTGGTTCTATAGGTA  350

seq1  AGAGTTAATAGTTATATATAAGTGAATACATAGTAATATTTGTCTCTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTAATAGTTATATATAAGTGAATACATAGTAATATTTGTCTCTCTG  400

seq1  GGTCTGAGTGATCTCATTCAGAGTAATTTTTCCTAGTTCCATCTAGTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGAGTGATCTCATTCAGAGTAATTTTTCCTAGTTCCATCTAGTTGC  450

seq1  TTGCAAATTTTATGATGTCATTTTTTTAATGACTGAGGAATACTCCATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAATTTTATGATGTCATTTTTTTAATGACTGAGGAATACTCCATTG  500

seq1  TGTAAATGTATCACATTTTCTTTAACCATTCTTCTAATAAGGAACATGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATGTATCACATTTTCTTTAACCATTCTTCTAATAAGGAACATGTA  550

seq1  GATTGTTTCCAATCTCTGGTTATTATGAATAGAGCAACAATGGACATGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTTTCCAATCTCTGGTTATTATGAATAGAGCAACAATGGACATGGT  600

seq1  CAAGCAAGTGTTTCTGTGCTGGGAAGAGACAACTAAAATGAAGGGGCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAAGTGTTTCTGTGCTGGGAAGAGACAACTAAAATGAAGGGGCATT  650

seq1: chr4_24356310_24357354
seq2: B6Ng01-110H14.g_68_1095 (reverse)

seq1  TCAGACGTAATTGGAACAAAACCATCAGCAGGCTCCATCTCCATTTGGGC  50
      |||||||||  ||  || |||||||||||| ||||||| | |||||||||
seq2  TCAGACGTA--TG--AC-AAACCATCAGCA-GCTCCAT-TTCATTTGGGC  43

seq1  ATGTAACCCTTTTACAAACACAATCACAGCCAAACACCATTGTAACCTGA  100
      |||||  |||||||||||||| ||||||||  ||||||||||||  ||||
seq2  ATGTA--CCTTTTACAAACAC-ATCACAGC--AACACCATTGTA--CTGA  86

seq1  TTTGCATTTGCACTAACTAAATTACAAAGCGCACTGAGGGTGCCTGCTAT  150
      |||||||||||||| |||||| ||||||||||||||||||||||||||||
seq2  TTTGCATTTGCACT-ACTAAA-TACAAAGCGCACTGAGGGTGCCTGCTAT  134

seq1  GCACACCACAGACTGGTTAGGAGGATGTATTGCGGAGCTTCTATGAACAC  200
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GCACACCACAGACTGGTTAGGAGGATGTAATGCGGAGCTTCTATGAACAC  184

seq1  TAATTAAAAAGGTTTTATCTTTCCCCTCTGGTTCACTGAAATTGTCAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAAAAGGTTTTATCTTTCCCCTCTGGTTCACTGAAATTGTCAAAT  234

seq1  GTCTCGCCTGCTACAACTTTGTTCGAAAACAGTTTTCAAACATGTGATCA  300
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCG-CTGCTACAACTTTGTTCGAAAACAGTTTTCAAACATGTGATCA  283

seq1  GAGCTAGGCAACTATTTAAGGGAACGTGATTCTGTCTCCCTGCTGGACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTAGGCAACTATTTAAGGGAACGTGATTCTGTCTCCCTGCTGGACAA  333

seq1  GCTCTAGAGATGAAGTTTTCGGCTAAACTTTGAGCTTCCTTCCCTCTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTAGAGATGAAGTTTTCGGCTAAACTTTGAGCTTCCTTCCCTCTGTT  383

seq1  ATTTTGTGTTGTGCAACCTTGGCATTATCCAATGGTGGACTTTTATCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTGTTGTGCAACCTTGGCATTATCCAATGGTGGACTTTTATCTGT  433

seq1  GAATATCTAAATCCTGTCTTGTGGAAAACTAATTACTGAACCACTGAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATCTAAATCCTGTCTTGTGGAAAACTAATTACTGAACCACTGAGAG  483

seq1  CTTCATAATGTCCTGCATTTAAGTCCTGAGCATCATACATAATGCATAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATAATGTCCTGCATTTAAGTCCTGAGCATCATACATAATGCATAGG  533

seq1  CAGCAGTCCCTGCACTCTGATTACAGAACACTGTCATTAAGTGAGCAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTCCCTGCACTCTGATTACAGAACACTGTCATTAAGTGAGCAAAT  583

seq1  TAAAGATGTGAATAATTCACTGGCTGCGCCTATTGTCAGCACTGCATTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATGTGAATAATTCACTGGCTGCGCCTATTGTCAGCACTGCATTGT  633

seq1  GAAATTAGAATTTCTAATAAGTACTGCAATTTTTTTAACCCAATTAACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTAGAATTTCTAATAAGTACTGCAATTTTTTTAACCCAATTAACAC  683

seq1  AGAGAACATCTTGAGACTGATTAGTACAATAAAAATTATTACCTTATTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACATCTTGAGACTGATTAGTACAATAAAAATTATTACCTTATTCT  733

seq1  TTTGCTTCACAACAGCCAAATTAAATACTGTACTTAATTATGCAGCATTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTCACAACAGCCAAATTAAATACTGTACTTAATTATGCAGCATTC  783

seq1  ATTCCTTCTCTGTTAAAAAAAATCCTATTGTTTTAATACGAGTTATAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTCTCTGTTAAAAAAAATCCTATTGTTTTAATACGAGTTATAATA  833

seq1  TTTGTATGTGAGCTAAAAATATAACACATGCATCTGTAGCTCACTGTCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATGTGAGCTAAAAATATAACACATGCATCTGTAGCTCACTGTCTT  883

seq1  TTGCAAAGTTTTTTTGAGAGTCTGAACAACACCATTGTTGCCACTGGTGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAAGTTTTTTTGAGAGTCTGAACAACACCATTGTTGCCACTGGTGG  933

seq1  GTGATGATGGCATTAGTGAGCTCTTAAACCAAACATTTTCCCTAAAAACA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGATGGCATTAGTGAGCTCTTAAACCAAACATTTTCCCTAAAAACA  983

seq1  AACAGCATATACATCATTGACAGAGTAACCCAGCTCTAGGAATTC  1045
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCATATACATCATTGACAGAGTAACCCAGCTCTAGGAATTC  1028