BAC Information

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BAC

Clone NameB6Ng01-110M19
Chromosome4 (Build37)
Map Location 84,222,691 - 84,223,776
singlet/doubletsinglet
Overlap genenone
Upstream gene4930473A06Rik, LOC668010, Bnc2
Downstream geneLOC100040660, LOC624465, LOC100040284, D530005L17Rik, LOC622811, LOC100040303, Sh3gl2, A930009N24
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-110M19.g
ACCDH917322
length1,068
definitionDH917322|Mus musculus domesticus DNA, BAC clone: B6Ng01-110M19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttttactggaaagaggtttaagtggattttttttttctc
caaagccagtgccactcccagtcggagagatgttttgttggagtccaggc
tgagctgaacagctgtgtagatagcacaggggcttgtagccccttaactg
gtgtcagaacatcgttgtattgatgagtgaggcctggtcaagtcacttaa
cctttcttccttggttttctcttatgtagactggaaatgataatatctgc
ctttgatctcacagggatgcttcaatccattagagtcattaaagcacttt
aagtaaggtataaggcactagaatcaaggcgccttcgttattgttatcat
tattgttattttattacagtgccatatacagaggaggaacttattaattc
taaatagtcaggtctcagaatatgttgtgtggatgtgaagagttagtggg
ggccttcagaggtcaggtttctccctcttttgtccccagtgcttaggcac
tgtttctccttacctccattaatttggagaatgcaaaaattgtaacaaag
gcaaaaaaaaaaaaaaaaacgcaaaaatgaacatagaaagcgaagaggca
gcaatctcttccttaggatccgatcctgtgaccttcggacctcctaaaat
ggaatcagtttgaaggccctgctccactgttcatctcctgtctgtgaaaa
gaaaagaatgttcaggggttctaaagtggtttcaaatgatcacgcaacca
ccctcccacctgccccccacccccagcctgccagcttgactttttttttt
tttaaagtactgtttctctagcaaagaccaagcgtttggagttgatgggt
aaagatctccgactgtctctggaaagcgttcaagaacttttgtacaagcc
gattgtgttcctagatcagccccttctgcattttgtctgagttgttcctc
ctcacacctcatatactgtccagaagggatgactccatatgcctggtggc
accacttgatgtcttatgaaagtggagaatgaaattctatccgaacagaa
gttggcttcctaggtctt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_84222691_84223776
seq2: B6Ng01-110M19.g_70_1137 (reverse)

seq1  AAGACCCAGGAAGCCAACTCTCTGTTCTGGATAGAACTCCATCTTCCACT  50
      |||||| |||||||||||| ||||||| |||||||| | |||  ||||| 
seq2  AAGACCTAGGAAGCCAACT-TCTGTTC-GGATAGAATTTCATTCTCCAC-  47

seq1  TTTTCAT-AGACATCAAGTTGGTGCCACCCAAGGCCATATGGAAGTCCAT  99
       |||||| |||||||||| ||||||||||  ||| ||||||| ||| |||
seq2  -TTTCATAAGACATCAAG-TGGTGCCACC--AGG-CATATGG-AGT-CAT  90

seq1  CGCCTTCTGGGACAGTATATGAGGTGTGAGGAAGGAAACACTCAAGACAA  149
      | |||||| |||||||||||||||||||||| |||||  |||| ||||||
seq2  C-CCTTCT-GGACAGTATATGAGGTGTGAGG-AGGAACAACTC-AGACAA  136

seq1  AATGCCAGAAGGGGCTGATCTAGGAAACACAATCGGCTTGTACAAAAGGT  199
      |||| ||||||||||||||||||| ||||||||||||||||||||||| |
seq2  AATG-CAGAAGGGGCTGATCTAGG-AACACAATCGGCTTGTACAAAAGTT  184

seq1  CTTTGAACGCTTTCCAGAGACAGTCGGAGATCTTTACCCATCAACTCCAA  249
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  C-TTGAACGCTTTCCAGAGACAGTCGGAGATCTTTACCCATCAACTCCAA  233

seq1  ACGCTTTGGTCTTTGCTAGAGAAACAGTACTTTAAAAAAAAAAAAAAGTC  299
      |||| |||||||||||||||||||||||||||| ||||||||||||||||
seq2  ACGC-TTGGTCTTTGCTAGAGAAACAGTACTTT-AAAAAAAAAAAAAGTC  281

seq1  AAGCTGGCAGGCTGGGGGTGGGGGGCAGGTGGGAGGGTGGTTGCGTGATC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGGCAGGCTGGGGGTGGGGGGCAGGTGGGAGGGTGGTTGCGTGATC  331

seq1  ATTTGAAACCACTTTAGAACCCCTGAACATTCTTTTCTTTTCACAGACAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAAACCACTTTAGAACCCCTGAACATTCTTTTCTTTTCACAGACAG  381

seq1  GAGATGAACAGTGGAGCAGGGCCTTCAAACTGATTCCATTTTAGGAGGTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGAACAGTGGAGCAGGGCCTTCAAACTGATTCCATTTTAGGAGGTC  431

seq1  CGAAGGTCACAGGATCGGATCCTAAGGAAGAGATTGCTGCCTCTTCGCTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGGTCACAGGATCGGATCCTAAGGAAGAGATTGCTGCCTCTTCGCTT  481

seq1  TCTATGTTCATTTTTGCGTTTTTTTTTTTTTTTTTGCCTTTGTTACAATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGTTCATTTTTGCGTTTTTTTTTTTTTTTTTGCCTTTGTTACAATT  531

seq1  TTTGCATTCTCCAAATTAATGGAGGTAAGGAGAAACAGTGCCTAAGCACT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATTCTCCAAATTAATGGAGGTAAGGAGAAACAGTGCCTAAGCACT  581

seq1  GGGGACAAAAGAGGGAGAAACCTGACCTCTGAAGGCCCCCACTAACTCTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACAAAAGAGGGAGAAACCTGACCTCTGAAGGCCCCCACTAACTCTT  631

seq1  CACATCCACACAACATATTCTGAGACCTGACTATTTAGAATTAATAAGTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCCACACAACATATTCTGAGACCTGACTATTTAGAATTAATAAGTT  681

seq1  CCTCCTCTGTATATGGCACTGTAATAAAATAACAATAATGATAACAATAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCTGTATATGGCACTGTAATAAAATAACAATAATGATAACAATAA  731

seq1  CGAAGGCGCCTTGATTCTAGTGCCTTATACCTTACTTAAAGTGCTTTAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGGCGCCTTGATTCTAGTGCCTTATACCTTACTTAAAGTGCTTTAAT  781

seq1  GACTCTAATGGATTGAAGCATCCCTGTGAGATCAAAGGCAGATATTATCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTAATGGATTGAAGCATCCCTGTGAGATCAAAGGCAGATATTATCA  831

seq1  TTTCCAGTCTACATAAGAGAAAACCAAGGAAGAAAGGTTAAGTGACTTGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGTCTACATAAGAGAAAACCAAGGAAGAAAGGTTAAGTGACTTGA  881

seq1  CCAGGCCTCACTCATCAATACAACGATGTTCTGACACCAGTTAAGGGGCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCTCACTCATCAATACAACGATGTTCTGACACCAGTTAAGGGGCT  931

seq1  ACAAGCCCCTGTGCTATCTACACAGCTGTTCAGCTCAGCCTGGACTCCAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCCCCTGTGCTATCTACACAGCTGTTCAGCTCAGCCTGGACTCCAA  981

seq1  CAAAACATCTCTCCGACTGGGAGTGGCACTGGCTTTGGAGAAAAAAAAAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACATCTCTCCGACTGGGAGTGGCACTGGCTTTGGAGAAAAAAAAAA  1031

seq1  TCCACTTAAACCTCTTTCCAGTAAAAACAAAGAATTC  1086
      |||||||||||||||||||||||||||||||||||||
seq2  TCCACTTAAACCTCTTTCCAGTAAAAACAAAGAATTC  1068