BAC Information

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BAC

Clone NameB6Ng01-111A06
Chromosome4 (Build37)
Map Location 25,452,756 - 25,453,831
singlet/doubletsinglet
Overlap genenone
Upstream geneF730047E07Rik, Klhl32, 1110007M04Rik, C230012O17Rik, Gpr63, Fhl5, 1810074P20Rik, Prdx6-rs2, LOC665019
Downstream geneLOC625732, Fut9, LOC100040780, Hn1-ps1, Manea, Bhmt-ps1, LOC665079, Gng2-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-111A06.bB6Ng01-111A06.g
ACCDH917475DH917476
length1,0591,149
definitionDH917475|Mus musculus domesticus DNA, BAC clone: B6Ng01-111A06, 5' end.DH917476|Mus musculus domesticus DNA, BAC clone: B6Ng01-111A06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattcactgagggtcttataaggagcatgtcccctgtgacaatta
agacattcttgactgaacgaaaacacgagaaaaacatgccgagcttcatg
ttaaggacacaattctaccctcattttcagttttaccacgtttaaaagct
aatctaatgggaggacagtatctacattaacaatgtttatttcatcattt
gcaatccaacaccaatatttcacactaacatgggaaggaaaatgcaaatg
agcaaagcaagacagatacatgatctgggccaacagaaggaagaggaaag
gtgggtggccagggaaggcaactccccagagtctggagcattgtgaccat
atctctcatgaacagatctggaaaggtcagagcattaatcctgaggctcc
cctgtggactcatttctgtgtgcctattttcttccactgtcaagtcttca
attccaaatgcataaagagaaaaaaagcaattaccaagagaaaatgagaa
cagcactaactgttgttttcctttgattggtggctctatgccactcagtt
atttttagctatcagcttgaagatactgacttcacttccacaactgctaa
tcagcatacttttctcttgtggttctaatactgtaaatatgacacacaga
caatgtttggaaatgtatataataatgaatattaatttatatacaaaata
ctctaactcaaatcagcctaaagtttgctgtaatgaattgagttcacgtg
atggctaatgacaatgatgacttccttacttcatgaatcacttagctcct
taaactcccccagtattgatccaagtgaattttaaatcaactatgagttc
tgttttgaatgagattaacatgagtattatcttgaatgctgaggagtact
gtgataattattatataaattttctgtttcacattgagctaaacattcct
tatgtcattttagcagatatgagtcaaatgctaaactctgtagctctgtt
aaaacatttcttcttgacatacaatgcatttatttcagtagaataaacaa
aatataaat
gaattctcacctgaggaataccgaatggcacagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagtaaatgtggtacatctacacaatg
gagtactactcagctattaaaaaagaatgaatttatgaaattcctagcca
aatggatggacctggagggcatcatcctgagtgaggtaacacattcacaa
aggaactcacagaatatgtactcactgataagtggatattagccccaaac
ctaggatacccaagatataagatacaatttgctaaacaaatgaaactcta
gaagaatgaagactgaagtgtggacactatgcccctccttagaattggga
acaaaacacccatggaaaggagttatagagacaaattttggagctgagat
gaaaggatggaccatgaagagactgtcatatccagggatccaccccataa
tcagcatccaaacgctgacaccattgcatgcactagcagatttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccgggcctagcaacac
agaagtggatgctcacagtcagctaatggatagatcacagggctcccatg
aggagctagagaagtagccagagctaagggatctgcatcctatagtgaca
cattatgactaccagtacccgagctctgactctagctgggttgtttcaag
atggctagtcggcatcactgaagaagagcccatcgactgcaactttaatg
tccaagtagggaacgcgcagctcataagggaagtggttgtgtagggaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_25452756_25453831
seq2: B6Ng01-111A06.b_50_1108 (reverse)

seq1  ATTTATTTTTTTGTTTTATTTCTACTTGAAATTAAATTGCATTTGTATGT  50
      ||||| | ||||||||   |||||| ||||||  || |||| ||||||||
seq2  ATTTA-TATTTTGTTT--ATTCTAC-TGAAAT--AAATGCA-TTGTATGT  43

seq1  TCAAAGAAGAAATGGTTTTAAACAGAGCTTACAGAGTTTAGCATTTGACT  100
         |||||||||||  ||| |||||||| |||||||||||||||||||||
seq2  --CAAGAAGAAATG--TTTTAACAGAGC-TACAGAGTTTAGCATTTGACT  88

seq1  CATATTCTTGCTAAAATGACAATTAAGGAATGTTTAGCTCAATGTGGAAA  150
      |||||   |||||||||||||  |||||||||||||||||||||| ||||
seq2  CATAT--CTGCTAAAATGACA--TAAGGAATGTTTAGCTCAATGT-GAAA  133

seq1  CAGAAAATTTATATAATAATTATCACAGTACTCCTCAGCATTCAAGATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATTTATATAATAATTATCACAGTACTCCTCAGCATTCAAGATAA  183

seq1  TACTCATGTTAATCTCATTCAAAACAGAACTCATAGTTGATTTAAAATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCATGTTAATCTCATTCAAAACAGAACTCATAGTTGATTTAAAATTC  233

seq1  ACTTGGATCAATACTGGGGGAGTTTAAGGAGCTAAGTGATTCATGAAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGATCAATACTGGGGGAGTTTAAGGAGCTAAGTGATTCATGAAGTA  283

seq1  AGGAAGTCATCATTGTCATTAGCCATCACGTGAACTCAATTCATTACAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTCATCATTGTCATTAGCCATCACGTGAACTCAATTCATTACAGC  333

seq1  AAACTTTAGGCTGATTTGAGTTAGAGTATTTTGTATATAAATTAATATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTAGGCTGATTTGAGTTAGAGTATTTTGTATATAAATTAATATTC  383

seq1  ATTATTATATACATTTCCAAACATTGTCTGTGTGTCATATTTACAGTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTATATACATTTCCAAACATTGTCTGTGTGTCATATTTACAGTATT  433

seq1  AGAACCACAAGAGAAAAGTATGCTGATTAGCAGTTGTGGAAGTGAAGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCACAAGAGAAAAGTATGCTGATTAGCAGTTGTGGAAGTGAAGTCA  483

seq1  GTATCTTCAAGCTGATAGCTAAAAATAACTGAGTGGCATAGAGCCACCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTTCAAGCTGATAGCTAAAAATAACTGAGTGGCATAGAGCCACCAA  533

seq1  TCAAAGGAAAACAACAGTTAGTGCTGTTCTCATTTTCTCTTGGTAATTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGAAAACAACAGTTAGTGCTGTTCTCATTTTCTCTTGGTAATTGC  583

seq1  TTTTTTTCTCTTTATGCATTTGGAATTGAAGACTTGACAGTGGAAGAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCTCTTTATGCATTTGGAATTGAAGACTTGACAGTGGAAGAAAA  633

seq1  TAGGCACACAGAAATGAGTCCACAGGGGAGCCTCAGGATTAATGCTCTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCACACAGAAATGAGTCCACAGGGGAGCCTCAGGATTAATGCTCTGA  683

seq1  CCTTTCCAGATCTGTTCATGAGAGATATGGTCACAATGCTCCAGACTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCAGATCTGTTCATGAGAGATATGGTCACAATGCTCCAGACTCTG  733

seq1  GGGAGTTGCCTTCCCTGGCCACCCACCTTTCCTCTTCCTTCTGTTGGCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTTGCCTTCCCTGGCCACCCACCTTTCCTCTTCCTTCTGTTGGCCC  783

seq1  AGATCATGTATCTGTCTTGCTTTGCTCATTTGCATTTTCCTTCCCATGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCATGTATCTGTCTTGCTTTGCTCATTTGCATTTTCCTTCCCATGTT  833

seq1  AGTGTGAAATATTGGTGTTGGATTGCAAATGATGAAATAAACATTGTTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGAAATATTGGTGTTGGATTGCAAATGATGAAATAAACATTGTTAA  883

seq1  TGTAGATACTGTCCTCCCATTAGATTAGCTTTTAAACGTGGTAAAACTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGATACTGTCCTCCCATTAGATTAGCTTTTAAACGTGGTAAAACTGA  933

seq1  AAATGAGGGTAGAATTGTGTCCTTAACATGAAGCTCGGCATGTTTTTCTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGGGTAGAATTGTGTCCTTAACATGAAGCTCGGCATGTTTTTCTC  983

seq1  GTGTTTTCGTTCAGTCAAGAATGTCTTAATTGTCACAGGGGACATGCTCC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTCGTTCAGTCAAGAATGTCTTAATTGTCACAGGGGACATGCTCC  1033

seq1  TTATAAGACCCTCAGTGAATGAATTC  1076
      ||||||||||||||||||||||||||
seq2  TTATAAGACCCTCAGTGAATGAATTC  1059