BAC Information

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BAC

Clone NameB6Ng01-112O21
Chromosome4 (Build37)
Map Location 86,677,675 - 86,770,945
singlet/doubletdoublet
Overlap geneSlc24a2
Upstream geneLOC668052, Adamtsl1, 4930500O09Rik, Rraga, 6230416J20Rik, LOC100040388, Adfp, EG624685, Dennd4c, Rps6, Asah3l
Downstream geneMllt3, BC057079
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112O21.bB6Ng01-112O21.g
ACCDH918858DH918859
length1,0331,098
definitionDH918858|Mus musculus domesticus DNA, BAC clone: B6Ng01-112O21, 5' end.DH918859|Mus musculus domesticus DNA, BAC clone: B6Ng01-112O21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,769,919 - 86,770,945)(86,677,675 - 86,678,770)
sequence
gaattcagaggtatatttacccacatcaggaaccacctcctgcggctcac
ctccatgtctcacagaacggggaagaagggatcctaataaggaatggagg
ttgaagaggcatgggttgtgcctgtgctccttagcttagtgattctcaat
cttcctaatgctgtgacactttcatacagttcctaatgccctggtgaccc
ccaaccataacattatgtttgttgctatttcataactgtaatttgctact
gttacgaatttacgttactgttgtaatgtaaaccctgtgtttcccgatgg
ttgtaggcgatccctgtggaaggattgtttaacttccaaaggggtcgtga
cccacaggttgagaaccactgctctggatgatcagtgcctgcagccagac
tttgtttgcagtaatccaaggctcctgggtcagagctgaaattgagggct
agacacaaagtaacaccatcagaaacagacctgcactcaagttctcccag
tggcgctggcgggcggtgccaccttgaacaaatcccttgaactctctgca
ctcttttcttcccatcttttctttggcacatattcctgtaatatgtcctc
ttcagggaggtcacaaggcttgatgagaacacacagctgaggagccactg
tttccttctctcattccgagcaatgggtaaatacatgacctggccacttg
catccttagcagattagatgataggtgtagaatttattttaaatcagaag
ggttttttttgttcaataatgtaaagatcactccatatttcatttaacat
gtgagctgttttccatatcagttttatagtatggtacttactagccatct
gggaccactaggatgtggattgcacgtgtgtgtgcatacacacacacata
cacagtcacacatgaaaccactcatccatctctggaatgaggttaatgag
ccacattagttataaaagccaaaactataatttattgaaccatggtccag
aaataggcttttaatcaaatttgaaaggtggca
gaattcttaagaaagaggaaatggcatgatttgaaaggaccctgttgggt
gagtgggtggtgagttgggggtgccgtgagcagtgtcacagatatacagt
ctgatcaccagtcacacatacagaagcaggactctcacctttggctaaat
gctaatgacatagatgactagagtgtgtctcctgtcaaatctggtgattt
tggttacaattactcttccctgtggattccctaagtgttactggagacat
acatgttcattcctgtcctgtcccagggggagaagaagaactcatttcat
tgtttaggaagggcctgaactaggactggggcaggggttcccacactggt
tctgtctctctgcctctccctccctccccccacccccaccagggaaggac
aagggatgggtctctcactcacccacatgattggcagccccattctgcct
ctcattctcatccacttggcatttcttcttggcgatcttgtggagaattg
aagctttttctctgaacctccctgaagcaagagaaagtggcaggagagag
acagagtgaggaagaaggattgccaaagcaggcgggcggtctctctatgc
gtcctgacagcagtgagcacacattttgtgcagtgcagcccaaatgcctt
tcaacctatatgggggcggggcgctctcttaccttggtggattcttcagc
ccagttcggttctctatctgagaatctatctgcaagctgccggaccatag
aggggaggtgtgacttggacctcttcctcccctccagctgctcacaaaat
tcatgaaaacacccatcatctcccaaaccacctctacccaccgctggaac
cccaaacaaggctgaagacccacagcggctttagaatcaaatgctcattc
cagatctgctttggacaatggtctgggaaggaaagccaggccagcccgtc
cttcaacctgacttggtttcaagtgtttcatcatggatgcagcctccaaa
ggagtcaagggcagacttcacagctctccaaaaaagctgagtcagcttgc
attaaagcaggaaaggcggccaggagatcccattttggggtatttagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_86769919_86770945
seq2: B6Ng01-112O21.b_45_1077 (reverse)

seq1  TGCCACCTCTC-AATTTGATTTAATGCCTATTTTCTGAACATGGTTCATT  49
      |||||||| || ||||||||| || ||||||||   || ||||||||| |
seq2  TGCCACCTTTCAAATTTGATTAAAAGCCTATTTCTGGACCATGGTTCAAT  50

seq1  AAATT-TATGTTTTGCTTTTATAACTAATGT-GCTCATTTACCTCATT-C  96
      ||||| ||  ||| ||||||||||||||||| ||||||| |||||||| |
seq2  AAATTATAGTTTTGGCTTTTATAACTAATGTGGCTCATTAACCTCATTCC  100

seq1  ACGGATGGATGAGTGGTTTCATGTGTGACTGTGTATGTGTGTGTGTATGC  146
      |  |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGGATGAGTGGTTTCATGTGTGACTGTGTATGTGTGTGTGTATGC  150

seq1  ACACACACGTGCAATCCACATCCTAGTGGTCCCAGATGGCTAGTAAGTAC  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACGTGCAATCCACATCCTAGTGGTCCCAGATGGCTAGTAAGTAC  200

seq1  CATACTATAAAACTGATATGG-AAACAGCTCACATGTTAAATGAAATATG  245
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CATACTATAAAACTGATATGGAAAACAGCTCACATGTTAAATGAAATATG  250

seq1  GAGTGATCTTTACATTATTGAAC-AAAAAAACCCTTCTGATTTAAAATAA  294
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GAGTGATCTTTACATTATTGAACAAAAAAAACCCTTCTGATTTAAAATAA  300

seq1  ATTCTACACCTATCATCTAATCTGCTAAGGATGCAAGTGGCCAGGTCATG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTACACCTATCATCTAATCTGCTAAGGATGCAAGTGGCCAGGTCATG  350

seq1  TATTTACCCATTGCTCGGAATGAGAGAAGGAAACAGTGGCTCCTCAGCTG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACCCATTGCTCGGAATGAGAGAAGGAAACAGTGGCTCCTCAGCTG  400

seq1  TGTGTTCTCATCAAGCCTTGTGACCTCCCTGAAGAGGACATATTACAGGA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCTCATCAAGCCTTGTGACCTCCCTGAAGAGGACATATTACAGGA  450

seq1  ATATGTGCCAAAGAAAAGATGGGAAGAAAAGAGTGCAGAGAGTTCAAGGG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTGCCAAAGAAAAGATGGGAAGAAAAGAGTGCAGAGAGTTCAAGGG  500

seq1  ATTTGTTCAAGGTGGCACCGCCCGCCAGCGCCACTGGGAGAACTTGAGTG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTCAAGGTGGCACCGCCCGCCAGCGCCACTGGGAGAACTTGAGTG  550

seq1  CAGGTCTGTTTCTGATGGTGTTACTTTGTGTCTAGCCCTCAATTTCAGCT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCTGTTTCTGATGGTGTTACTTTGTGTCTAGCCCTCAATTTCAGCT  600

seq1  CTGACCCAGGAGCCTTGGATTACTGCAAACAAAGTCTGGCTGCAGGCACT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCCAGGAGCCTTGGATTACTGCAAACAAAGTCTGGCTGCAGGCACT  650

seq1  GATCATCCAGAGCAGTGGTTCTCAACCTGTGGGTCACGACCCCTTTGGAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATCCAGAGCAGTGGTTCTCAACCTGTGGGTCACGACCCCTTTGGAA  700

seq1  GTTAAACAATCCTTCCACAGGGATCGCCTACAACCATCGGGAAACACAGG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAACAATCCTTCCACAGGGATCGCCTACAACCATCGGGAAACACAGG  750

seq1  GTTTACATTACAACAGTAACGTAAATTCGTAACAGTAGCAAATTACAGTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACATTACAACAGTAACGTAAATTCGTAACAGTAGCAAATTACAGTT  800

seq1  ATGAAATAGCAACAAACATAATGTTATGGTTGGGGGTCACCAGGGCATTA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATAGCAACAAACATAATGTTATGGTTGGGGGTCACCAGGGCATTA  850

seq1  GGAACTGTATGAAAGTGTCACAGCATTAGGAAGATTGAGAATCACTAAGC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTGTATGAAAGTGTCACAGCATTAGGAAGATTGAGAATCACTAAGC  900

seq1  TAAGGAGCACAGGCACAACCCATGCCTCTTCAACCTCCATTCCTTATTAG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAGCACAGGCACAACCCATGCCTCTTCAACCTCCATTCCTTATTAG  950

seq1  GATCCCTTCTTCCCCGTTCTGTGAGACATGGAGGTGAGCCGCAGGAGGTG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCTTCTTCCCCGTTCTGTGAGACATGGAGGTGAGCCGCAGGAGGTG  1000

seq1  GTTCCTGATGTGGGTAAATATACCTCTGAATTC  1027
      |||||||||||||||||||||||||||||||||
seq2  GTTCCTGATGTGGGTAAATATACCTCTGAATTC  1033

seq1: chr4_86677675_86678770
seq2: B6Ng01-112O21.g_66_1163

seq1  GAATTCTTAAGAAAGAGGAAATGGCATGATTTGAAAGGACCCTGTTGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAGAAAGAGGAAATGGCATGATTTGAAAGGACCCTGTTGGGT  50

seq1  GAGTGGGTGGTGAGTTGGGGGTGCCGTGAGCAGTGTCACAGATATACAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGGTGGTGAGTTGGGGGTGCCGTGAGCAGTGTCACAGATATACAGT  100

seq1  CTGATCACCAGTCACACATACAGAAGCAGGACTCTCACCTTTGGCTAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCACCAGTCACACATACAGAAGCAGGACTCTCACCTTTGGCTAAAT  150

seq1  GCTAATGACATAGATGACTAGAGTGTGTCTCCTGTCAAATCTGGTGATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATGACATAGATGACTAGAGTGTGTCTCCTGTCAAATCTGGTGATTT  200

seq1  TGGTTACAATTACTCTTCCCTGTGGATTCCCTAAGTGTTACTGGAGACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTACAATTACTCTTCCCTGTGGATTCCCTAAGTGTTACTGGAGACAT  250

seq1  ACATGTTCATTCCTGTCCTGTCCCAGGGGGAGAAGAAGAACTCATTTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTTCATTCCTGTCCTGTCCCAGGGGGAGAAGAAGAACTCATTTCAT  300

seq1  TGTTTAGGAAGGGCCTGAACTAGGACTGGGGCAGGGGTTCCCACACTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAGGAAGGGCCTGAACTAGGACTGGGGCAGGGGTTCCCACACTGGT  350

seq1  TCTGTCTCTCTGCCTCTCCCTCCCTCCCCCCACCCCCACCAGGGAAGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTCTCTGCCTCTCCCTCCCTCCCCCCACCCCCACCAGGGAAGGAC  400

seq1  AAGGGATGGGTCTCTCACTCACCCACATGATTGGCAGCCCCATTCTGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGATGGGTCTCTCACTCACCCACATGATTGGCAGCCCCATTCTGCCT  450

seq1  CTCATTCTCATCCACTTGGCATTTCTTCTTGGCGATCTTGTGGAGAATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTCTCATCCACTTGGCATTTCTTCTTGGCGATCTTGTGGAGAATTG  500

seq1  AAGCTTTTTCTCTGAACCTCCCTGAAGCAAGAGAAAGTGGCAGGAGAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTTTTCTCTGAACCTCCCTGAAGCAAGAGAAAGTGGCAGGAGAGAG  550

seq1  ACAGAGTGAGGAAGAAGGATTGCCAAAGCAGGCGGGCGGTCTCTCTATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGTGAGGAAGAAGGATTGCCAAAGCAGGCGGGCGGTCTCTCTATGC  600

seq1  GTCCTGACAGCAGTGAGCACACATTTTGTGCAGTGCAGCCCAAATGCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGACAGCAGTGAGCACACATTTTGTGCAGTGCAGCCCAAATGCCTT  650

seq1  TCAACCTATATGGGGGCGGGGCGCTCTCTTACCTTGGTGGATTCTTCAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCTATATGGGGGCGGGGCGCTCTCTTACCTTGGTGGATTCTTCAGC  700

seq1  CCAGTTCGGTTCTCTATCTGAGAATCTATCTGCAAGCTGCCGGACCATAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTCGGTTCTCTATCTGAGAATCTATCTGCAAGCTGCCGGACCATAG  750

seq1  AGGGGAGGTGTGACTTGGACCTCTTCCTCCCCTCCAGCTGCTCACAAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGGTGTGACTTGGACCTCTTCCTCCCCTCCAGCTGCTCACAAAAT  800

seq1  TCATGAAAACACCCATCATCTCCCAAACCACCTCTACCCACCGCTGGAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAAAACACCCATCATCTCCCAAACCACCTCTACCCACCGCTGGAAC  850

seq1  CCCAAACAAGGCTGAAGACCCACAGCGGCTTTAGAATCAAATGCTCATTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAACAAGGCTGAAGACCCACAGCGGCTTTAGAATCAAATGCTCATTC  900

seq1  CAGATCTGCTTTGGACAATGG-CTGGGAAGGAAAGCCAAGCCAGCCCGTC  949
      ||||||||||||||||||||| |||||||||||||||| |||||||||||
seq2  CAGATCTGCTTTGGACAATGGTCTGGGAAGGAAAGCCAGGCCAGCCCGTC  950

seq1  CTTCACACTGACTTTGGTTTTCAAGTGTTTCATCATGATTGCAGCTTCCA  999
      |||||  |||||||  | |||||||||||||||||||  |||||| ||||
seq2  CTTCAACCTGACTT--GGTTTCAAGTGTTTCATCATGGATGCAGCCTCCA  998

seq1  AAGGAGTCAGGGGCAGACATCACAGCTCTCCAGAAAAAGCTGAGTCAGCT  1049
      ||||||||| |||||||| ||||||||||||| |||||||||||||||||
seq2  AAGGAGTCAAGGGCAGACTTCACAGCTCTCCA-AAAAAGCTGAGTCAGCT  1047

seq1  GCAATTAAAGCAAG-AAGGCGGCCACG-GATCCCATTT--GGGGATTTAG  1095
         ||||||||| | |||||||||| | ||||||||||  ||| ||||||
seq2  TGCATTAAAGCAGGAAAGGCGGCCAGGAGATCCCATTTTGGGGTATTTAG  1097

seq1  G  1096
      |
seq2  G  1098