BAC Information

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BAC

Clone NameB6Ng01-113F12
Chromosome4 (Build37)
Map Location 150,938,062 - 151,065,024
singlet/doubletdoublet
Overlap geneCamta1
Upstream geneRere, Slc45a1, LOC677027, Errfi1, Park7, Tnfrsf9, Uts2, Per3, Vamp3
Downstream geneLOC100041960, Dnajc11, Thap3, Phf13, Klhl21, Zbtb48, Tas1r1, Nol9, EG666980, Plekhg5, Tnfrsf25, Espn, LOC100043284, Hes2, Acot7, Gpr153, Hes3, Icmt, Rnf207, Rpl22, Chd5, Kcnab2, LOC100042028, Nphp4, LOC667039
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113F12.bB6Ng01-113F12.g
ACCDH919164DH919165
length309970
definitionDH919164|Mus musculus domesticus DNA, BAC clone: B6Ng01-113F12, 5' end.DH919165|Mus musculus domesticus DNA, BAC clone: B6Ng01-113F12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,064,717 - 151,065,024)(150,938,062 - 150,939,032)
sequence
atgtgctctgtgctctgaggggagatggcttcactgcgcaggcttcgggg
attcctgtaagttgtcactgccctttctgagtggtgtttcattgtgtgag
tgagcggctctgcgctcactcccagcctctctttggcatctgctatgttt
cctgtgtagggccgttaggagtaaagagactgggaatattttatacaagt
ctcttttgaaggacacgtgcttttgtttcttttgggtaagtgcctaagaa
ttggaggtgttatatttttattttattaaaagaagagaaagctatcaatc
tgccagatt
gaattccaggatctccttggtccctgagggccgtgcttcctgaagcccgc
tcgatggacctgcttgtgacgattggtgatacattctcttgtctcagccc
catggagggcaggacagctcttctcaacatccttctctgtgggcccaagt
tagtaagggagattgctgatgtagcattttttaatggagggccctgaggg
caggaagtctgtaccctcaatctcacctctatggagcaccacggggtact
aagggtactcactaaggaccctgctaagaaaaaccgaggaaaggtcacac
tggtaacttgtgtcagcttagtccccaggagacccccaggtgagataggc
ttttaatctttattgtccctatggtacatcagatccctgccccctccctg
caggaatgccagttttcctattgtggggatcctctgagctcctagcttgt
tctatacatacacagagctgcctgcttcaccccttcagggagcccagaca
gacccagagcggttggatcacagcaagcctgtctcccctggacaaacatt
tctgctgcactttgggctcaagggtccgtccacattgatgccccaggaca
cacacttctcaggacacaattaaagatggcctgtgtggttgactgccatc
tgattctgctgattgttttgcctggggtgggaggctgaggccccctcccc
tgcccactcatctgcacctcctgtttgaagccctggcttctatgggcttc
ccccgagcttctgccttgagctagtctcaacctgagaccccatcaggaca
gacagaaaggtgggggtcccacagcctcacaggagcttaaggactggttt
ggagggagcttgagccaatggagtctttttatgaaaaggatcagccgcta
gcaaatccttgaagaaacataaggctttatcctttaatttctgaaattga
acttgacattaggggtcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_151064717_151065024
seq2: B6Ng01-113F12.b_54_362 (reverse)

seq1  ACTCTGGCAGCTTGCTTGCTTTCTCTTCTTTTAATAAAATAAAAATATAA  50
      | |||||||| ||| | |||||||||||||||||||||||||||||||||
seq2  AATCTGGCAGATTGATAGCTTTCTCTTCTTTTAATAAAATAAAAATATAA  50

seq1  CACCTCCAATTCTTAGGCACTTACCCAAAAGAAACAAAAGCACGTGTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCCAATTCTTAGGCACTTACCCAAAAGAAACAAAAGCACGTGTCCT  100

seq1  TC-AAAGAGACTTGTATAAAATATTCCCAGTCTCTTTACTCCTAACGGCC  149
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGAGACTTGTATAAAATATTCCCAGTCTCTTTACTCCTAACGGCC  150

seq1  CTACACAGGAAACATAGCAGATGCCAAAGAGAGGCTGGGAGTGAGCGCAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACAGGAAACATAGCAGATGCCAAAGAGAGGCTGGGAGTGAGCGCAG  200

seq1  AGCCGCTCACTCACACAATGAAACACCACTCAGAAAGGGCAGTGACAACT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGCTCACTCACACAATGAAACACCACTCAGAAAGGGCAGTGACAACT  250

seq1  TACAGGAATCCCCGAAGCCTGCGCAGTGAAGCCATCTCCCCTCAGAGCAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGAATCCCCGAAGCCTGCGCAGTGAAGCCATCTCCCCTCAGAGCAC  300

seq1  AGAGCACAT  308
      |||||||||
seq2  AGAGCACAT  309

seq1: chr4_150938062_150939032
seq2: B6Ng01-113F12.g_71_1040

seq1  GAATTCCAGGATCTCCTTGGTCCCTGAGGGCCGTGCTTCCTGAAGCCCGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGATCTCCTTGGTCCCTGAGGGCCGTGCTTCCTGAAGCCCGC  50

seq1  TCGATGGACCTGCTTGTGACGATTGGTGATACATTCTCTTGTCTCAGCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATGGACCTGCTTGTGACGATTGGTGATACATTCTCTTGTCTCAGCCC  100

seq1  CATGGAGGGCAGGACAGCTCTTCTCAACATCCTTCTCTGTGGGCCCAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGGGCAGGACAGCTCTTCTCAACATCCTTCTCTGTGGGCCCAAGT  150

seq1  TAGTAAGGGAGATTGCTGATGTAGCATTTTTTAATGGAGGGCCCTGAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAGGGAGATTGCTGATGTAGCATTTTTTAATGGAGGGCCCTGAGGG  200

seq1  CAGGAAGTCTGTACCCTCAATCTCACCTCTATGGAGCACCACGGGGTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGTCTGTACCCTCAATCTCACCTCTATGGAGCACCACGGGGTACT  250

seq1  AAGGGTACTCACTAAGGACCCTGCTAAGAAAAACCGAGGAAAGGTCACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTACTCACTAAGGACCCTGCTAAGAAAAACCGAGGAAAGGTCACAC  300

seq1  TGGTAACTTGTGTCAGCTTAGTCCCCAGGAGACCCCCAGGTGAGATAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAACTTGTGTCAGCTTAGTCCCCAGGAGACCCCCAGGTGAGATAGGC  350

seq1  TTTTAATCTTTATTGTCCCTATGGTACATCAGATCCCTGCCCCCTCCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATCTTTATTGTCCCTATGGTACATCAGATCCCTGCCCCCTCCCTG  400

seq1  CAGGAATGCCAGTTTTCCTATTGTGGGGATCCTCTGAGCTCCTAGCTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATGCCAGTTTTCCTATTGTGGGGATCCTCTGAGCTCCTAGCTTGT  450

seq1  TCTATACATACACAGAGCTGCCTGCTTCACCCCTTCAGGGAGCCCAGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATACATACACAGAGCTGCCTGCTTCACCCCTTCAGGGAGCCCAGACA  500

seq1  GACCCAGAGCGGTTGGATCACAGCAAGCCTGTCTCCCCTGGACAAACATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAGAGCGGTTGGATCACAGCAAGCCTGTCTCCCCTGGACAAACATT  550

seq1  TCTGCTGCACTTTGGGCTCAAGGGTCCGTCCACATTGATGCCCCAGGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGCACTTTGGGCTCAAGGGTCCGTCCACATTGATGCCCCAGGACA  600

seq1  CACACTTCTCAGGACACAATTAAAGATGGCCTGTGTGGTTGACTGCCATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTCTCAGGACACAATTAAAGATGGCCTGTGTGGTTGACTGCCATC  650

seq1  TGATTCTGCTGATTGTTTTGCCTGGGATGGGAGGCTGAGGCCCCCTCCCC  700
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TGATTCTGCTGATTGTTTTGCCTGGGGTGGGAGGCTGAGGCCCCCTCCCC  700

seq1  TGCCCACTCATCTGCACCTCCTGTTTGAAGCCCTGGCTTCTATGGGCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCACTCATCTGCACCTCCTGTTTGAAGCCCTGGCTTCTATGGGCTTC  750

seq1  CCC--GGCTTCTGCCTTGAGCTAGTCTCAACCTGAGACCCCAGCAGGACA  798
      |||   |||||||||||||||||||||||||||||||||||| |||||||
seq2  CCCCGAGCTTCTGCCTTGAGCTAGTCTCAACCTGAGACCCCATCAGGACA  800

seq1  GACAGAAAGGTGGGGTTCCCACAGCCTCACAGGAGCTT-AGGACTGGTTT  847
      ||||||||||||||| |||||||||||||||||||||| |||||||||||
seq2  GACAGAAAGGTGGGGGTCCCACAGCCTCACAGGAGCTTAAGGACTGGTTT  850

seq1  GGAGGGAGCTTGAGCCAATGGAGTCATTTTAATGAAAAGGATCAAGCGCT  897
      ||||||||||||||||||||||||| |||| |||||||||||||  ||||
seq2  GGAGGGAGCTTGAGCCAATGGAGTC-TTTTTATGAAAAGGATCAGCCGCT  899

seq1  AGCAAATCCTTGGAGGAAACAGAAGGCGTTTAATCCTTTAATTTCTGAAA  947
      ||||||||||| || |||||| |||||  || ||||||||||||||||||
seq2  AGCAAATCCTT-GAAGAAACATAAGGC--TTTATCCTTTAATTTCTGAAA  946

seq1  TTTGAAC-TGACATTAGGGGTCCTT  971
       |||||| |||||||||||||||||
seq2  -TTGAACTTGACATTAGGGGTCCTT  970