BAC Information

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BAC

Clone NameB6Ng01-115B12
Chromosome4 (Build37)
Map Location 90,911,110 - 90,912,195
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC619842, LOC435792, Ppia-ps4_804.1, LOC664840, LOC664848, LOC100042274
Downstream geneElavl2, LOC664864, LOC620016, LOC654475, 4930577H14Rik, LOC664886, 1700011H22Rik, LOC68280
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115B12.bB6Ng01-115B12.g
ACCDH920446DH920447
length5501,087
definitionDH920446|Mus musculus domesticus DNA, BAC clone: B6Ng01-115B12, 5' end.DH920447|Mus musculus domesticus DNA, BAC clone: B6Ng01-115B12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ttgtaaattggtcaacagttttgttttctttttgtttttgtttttggggg
tggggtgggatattttatttacctgtcaaatgttatcccctttcccagtt
tcccctccggaaaccccctattccccctcctcctgagggtgctcccccac
ccacccacatactccacctccgtgctctggcgtttccctatgctggagca
tcaagccttcacaggaccatggacttctcctaccactgatacccaacaag
gccatcctctgctacatatgtgtctggagccatggattgctccttggttg
gtggtttagtccctgggagctctgggggtgatctgctttgttgatattat
tgttcttcctatggggttgcaaaccccttaagctccttcattcctttctc
taactgctccattgaggactctgttctcagtccaatgggtggctgggagc
atctgcctctgtatttttcaggctctggcagtctctcaggagacagctat
atcaggcttctgtcagcaagcacttctggacatcagcaatagtgtctggg


gaattctgcatggtttcccattagtgtattcccctagatttgtgtgaatg
ggctgaagaaaatccaaaactggggttctcgctccaaagtaaagcttaca
gtggcaatgtgtaaatgcttgccacagcattcaattggcagtttgatggc
agtactctgtgtagcaggatcctggatgagacgaggaggaatctgcagcc
atggagaacagatgcgtatgccagggtcctggatgagacgaggagggatc
tgcagccatggagaacagatgcgtatgccagggtcctggatgagacgagg
agggatctgcagccatggagaacagatgcgtatgccagggtcctggatga
gacgaggagggatctgcagccatggagaacagatgcgtatgccagggtcc
tggatgagacgaggagggatctgcagccatggagaacagatgcgtatgcc
agtaccaggaagtcagctaagaaaatgctttcttccctaatctcggccag
gaagaggatgtctgcggaaccaattgtagggaagtaattctttttctcct
cttcccctctgtctctgattgcagtgatctttcctcttgcaaggatctgg
gtaaatactggctccttattgcatgtacgcagacaagtagctgatggaga
agtgcacttttaaaaggattgatgagcttaaaagacactcgttagagtgc
acctggatcctgccatgacatcacaggcgaagcatcagccgctctcggga
aagcatggcagcctttttttcacctctttcttaacaatgagacgtagatt
gggcctgctctctattcaagcatccttatgagtaaatgtctatttttacg
aaagagctgcacgtttaaaaatagctccaatcagtgtgactcttttcccc
catatgttaaaaagttatgcacgagttaaaatatctcagattgcttaaat
tccttcaaacgcaaagcacattccttttcacttggaggggctggactggg
tagagggggagggttaaaatacattcatatgtgtactgcatacatcgggg
gtgaggggtgggcagtaccttcctccactctggtttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_90911110_90912195
seq2: B6Ng01-115B12.g_68_1154 (reverse)

seq1  CAAACACAGAGTTGAGG-AGGTACTGCCCCACCCTCA-CCCCGATGTATG  48
      ||||| |||||| |||| |||||||||||  |||||| ||||||||||||
seq2  CAAAC-CAGAGTGGAGGAAGGTACTGCCCACCCCTCACCCCCGATGTATG  49

seq1  CAGTACACATATTGATTGTATTTTAACCCT-CCCCTCTACCCAGTCCAGC  97
      ||||||||||| ||| |||||||||||||| |||||||||||||||||| 
seq2  CAGTACACATA-TGAATGTATTTTAACCCTCCCCCTCTACCCAGTCCAG-  97

seq1  CCCCTCCAAGTGAAAAAGGAATGTGCTTTGCGTTTGAAGGAATTTAAGCA  147
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCAAGTG-AAAAGGAATGTGCTTTGCGTTTGAAGGAATTTAAGCA  146

seq1  ATCTGAGATATTTTAACTCGTGCATAACTTTTTAACATATGGGGGAAAAG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGATATTTTAACTCGTGCATAACTTTTTAACATATGGGGGAAAAG  196

seq1  AGTCACACTGATTGGAGCTATTTTT-AACGTGCAGCTCTTTCGTAAAAAT  246
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGTCACACTGATTGGAGCTATTTTTAAACGTGCAGCTCTTTCGTAAAAAT  246

seq1  AGACATTTACTCATAAGGATGCTTGAATAGAGAGCAGGCCCAATCTACGT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTTACTCATAAGGATGCTTGAATAGAGAGCAGGCCCAATCTACGT  296

seq1  CTCATTGTTAAGAAAGAGGTG-AAAAAAGGCTGCCATGCTTTCCCGAGAG  345
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTCATTGTTAAGAAAGAGGTGAAAAAAAGGCTGCCATGCTTTCCCGAGAG  346

seq1  CGGCTGATGCTTCGCCTGTGATGTCATGGCAGGATCCAGGTGCACTCTAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTGATGCTTCGCCTGTGATGTCATGGCAGGATCCAGGTGCACTCTAA  396

seq1  CGAGTGTCTTTTAAGCTCATCAATCCTTTTAAAAGTGCACTTCTCCATCA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTGTCTTTTAAGCTCATCAATCCTTTTAAAAGTGCACTTCTCCATCA  446

seq1  GCTACTTGTCTGCGTACATGCAATAAGGAGCCAGTATTTACCCAGATCCT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTTGTCTGCGTACATGCAATAAGGAGCCAGTATTTACCCAGATCCT  496

seq1  TGCAAGAGGAAAGATCACTGCAATCAGAGACAGAGGGGAAGAGGAGAAAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGAGGAAAGATCACTGCAATCAGAGACAGAGGGGAAGAGGAGAAAA  546

seq1  AGAATTACTTCCCTACAATTGGTTCCGCAGACATCCTCTTCCTGGCCGAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTACTTCCCTACAATTGGTTCCGCAGACATCCTCTTCCTGGCCGAG  596

seq1  ATTAGGGAAGAAAGCATTTTCTTAGCTGACTTCCTGGTACTGGCATACGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGGAAGAAAGCATTTTCTTAGCTGACTTCCTGGTACTGGCATACGC  646

seq1  ATCTGTTCTCCATGGCTGCAGATCCCTCCTCGTCTCATCCAGGACCCTGG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTCTCCATGGCTGCAGATCCCTCCTCGTCTCATCCAGGACCCTGG  696

seq1  CATACGCATCTGTTCTCCATGGCTGCAGATCCCTCCTCGTCTCATCCAGG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACGCATCTGTTCTCCATGGCTGCAGATCCCTCCTCGTCTCATCCAGG  746

seq1  ACCCTGGCATACGCATCTGTTCTCCATGGCTGCAGATCCCTCCTCGTCTC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGGCATACGCATCTGTTCTCCATGGCTGCAGATCCCTCCTCGTCTC  796

seq1  ATCCAGGACCCTGGCATACGCATCTGTTCTCCATGGCTGCAGATCCCTCC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGGACCCTGGCATACGCATCTGTTCTCCATGGCTGCAGATCCCTCC  846

seq1  TCGTCTCATCCAGGACCCTGGCATACGCATCTGTTCTCCATGGCTGCAGA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCTCATCCAGGACCCTGGCATACGCATCTGTTCTCCATGGCTGCAGA  896

seq1  TTCCTCCTCGTCTCATCCAGGATCCTGCTACACAGAGTACTGCCATCAAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCTCGTCTCATCCAGGATCCTGCTACACAGAGTACTGCCATCAAA  946

seq1  CTGCCAATTGAATGCTGTGGCAAGCATTTACACATTGCCACTGTAAGCTT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAATTGAATGCTGTGGCAAGCATTTACACATTGCCACTGTAAGCTT  996

seq1  TACTTTGGAGCGAGAACCCCAGTTTTGGATTTTCTTCAGCCCATTCACAC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTGGAGCGAGAACCCCAGTTTTGGATTTTCTTCAGCCCATTCACAC  1046

seq1  AAATCTAGGGGAATACACTAATGGGAAACCATGCAGAATTC  1086
      |||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTAGGGGAATACACTAATGGGAAACCATGCAGAATTC  1087


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