BAC Information

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BAC

Clone NameB6Ng01-115I23
Chromosome4 (Build37)
Map Location 146,092,977 - 146,093,702
singlet/doubletsinglet
Overlap geneMGC117846
Upstream geneLOC622846, LOC666314, LOC545701, OTTMUSG00000010965, LOC666334, LOC545703, LOC384081, LOC100041379, LOC666349, LOC666351, LOC545704, 1700029I01Rik, LOC236069, LOC384084, LOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445
Downstream geneOTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115I23.bB6Ng01-115I23.g
ACCDH920791DH920792
length1,1741,109
definitionDH920791|Mus musculus domesticus DNA, BAC clone: B6Ng01-115I23, 5' end.DH920792|Mus musculus domesticus DNA, BAC clone: B6Ng01-115I23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacaatgaagcaactgtggaaggctgagaaacttcaaaagaaatg
ttcaaagtctttagtgatcagaaacatatacatcaaagcaacactgagat
tccaccttccaccaatcagaatggctaatataaaaagctcaggtgacagc
acatgctggccaggatgtggagaaagaggaccactcctccattgcttgtg
gaattgaaaactggtcaactattctggaaatcaatctggagattcctcag
aatattggaaatagatataccttaaaacccagctataccactcttgggca
tatacacaaaagatgaccaaccatgacacaggggcttgtgttccactatg
ttcagagtggccttacttgtgatagccaggatctggaaacaacccagatg
ccccacaatggaagaatcgacactgaaatatggttcatttacacaatgga
gtattattcatctattaagaacaacgacatcaggagctttggaggaaaat
ggattgaactagaaaattccatcctgagtgaggcaactcagacccaaaaa
aggacatgcatagtatgtacacactaacaaatggatatcagccaaaaaaa
agtatataataaaacataaatgactacagagggttaaaaagctcaagttt
ccaagtgaggatgtctcaatcccacttgggagacagaggaaagcattttg
gggggaagaagtggggagagaactgagtggaagcagggacagagagggga
aggggaaacatgatcagtcattgtgagggatgggggaggactgaagccct
gagaaccagtagaaaaaatggaaatagacagcctcaggaggtaggctatg
gaggtccatctcacatgttccaaagacctaggaggtgagagactcccagg
actcaaagggagagaccttggataaagtgctgtccagtggagggacaggc
atcagtgagtgatgaagttgaaatcctaaacaccaaacctctgatccaga
aatgttcctgtttgaaggatctcaggagaaactggagaacgacatgaaag
aaaagagctcatggccaggcccaaattagattcatttcaaggtggcaaag
gcagtgaacctggtacctcatactgtggtgcttatagacggactcggtat
gcatgcctctaagaagttccacat
gaattcatcagagaattcatacaggagagaaaccttacaaatgcagtgaa
tgtggcaaatgctttactgaaaaaagcagtctgagaattcatcagagaat
tcatacaggacagaaaccttacaaatgcagtgaatgtggcaaatgcttta
cccaacaatccaatcttagtattcatcagagaattcatacaggagagaaa
ccttacaaatgcagtgaatgtgacaaatgctttacccaacaatccaatct
tagtattcatcagagaattcatacaggagagaaaccttacaaatgcagtg
aatgtgacaaatgcttttcccgaaaattccatcttggtattcatcagaga
attcatacaggagagaatccttataaatgtagtgaatgtaacaaatgctt
tacccaaaattcctatcttaatattcatcagagaattcatgcaggagaga
aaccttacaaatgcagtgaatgtgacaaatgctttactgaaaaaggcagt
ctgacaattcatcagagaattcatacaggagagaaaccttacaaatgtag
tgaatgtgacaaatgcttttcccgaaaattccatcttggtattcatcaga
gaattcatacaagagagaaacctcacaaatgtagtgaatgtgacaaatgc
tttacccagaaatcccatcttagtattcatcagaaaattcatacaagaga
gaaaccttacaaatagattgtatgtgacaaatacaatactcacaatgtca
gtctgagaaatcatcagttatttcatgcagtagagaatctttataaatga
agtgaacgagacaatcctttaccaagatatatcatctcaaaattcattag
agaatacttagagaagacaaacttttcaaatatattgtaggtatgaatcc
tttccttttggcctagttcctagaatataacagtgaatatacttacaggc
tagaaacttaactcatgcattgtatgagaaatagctttgacttcatttca
gtcagagagacatctagacttttagggtaaagtatttctgtagggaaaat
gttgtatcctgacatcactggagcttccaccttagagattagtatgatta
tggaaatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146092977_146093702
seq2: B6Ng01-115I23.g_457_1175

seq1  ACAAATGCTTTACCAAACCATCCCATCTTAGTATTCATCAGAGAATTCAT  50
      |||||||||||||| ||   ||| |||||| |||||||||||||||||||
seq2  ACAAATGCTTTACCCAAAATTCCTATCTTAATATTCATCAGAGAATTCAT  50

seq1  ACAGGAGAGAAACCTTACAAATGCAGTGAATGTGAAAAATGCTTTAATGA  100
       |||||||||||||||||||||||||||||||||| |||||||||| |||
seq2  GCAGGAGAGAAACCTTACAAATGCAGTGAATGTGACAAATGCTTTACTGA  100

seq1  AAAAAACATTCTGAAAATTCATCAGAGAATTCATACAGGAGAGAGACCTT  150
      ||||  || ||||| ||||||||||||||||||||||||||||| |||||
seq2  AAAAGGCAGTCTGACAATTCATCAGAGAATTCATACAGGAGAGAAACCTT  150

seq1  ACAAATGTAGTGAATGTGACAAATGCTTTTCCCGAAAATTCCATCTTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGTAGTGAATGTGACAAATGCTTTTCCCGAAAATTCCATCTTGGT  200

seq1  ATTCATCAGAGAATTCATACAGGAAAGAAACCTTACAAATGTAGTGAATG  250
      ||||||||||||||||||||| || |||||||| ||||||||||||||||
seq2  ATTCATCAGAGAATTCATACAAGAGAGAAACCTCACAAATGTAGTGAATG  250

seq1  TGACAAATGCTTTACCCAGAAATCCCATCTTAGTATTCATCAGAAAATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAATGCTTTACCCAGAAATCCCATCTTAGTATTCATCAGAAAATTC  300

seq1  ATACAGGAGAGAAACCTTACAAATAGAATGTATGTGACAAATACAATACT  350
      ||||| ||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATACAAGAGAGAAACCTTACAAATAGATTGTATGTGACAAATACAATACT  350

seq1  CACAATGTCAGTCTTAGAAATCATCAGTTATTTCATACAGTAGAGAATCT  400
      |||||||||||||| ||||||||||||||||||||| |||||||||||||
seq2  CACAATGTCAGTCTGAGAAATCATCAGTTATTTCATGCAGTAGAGAATCT  400

seq1  TTATAAATGAAGTGAACGAGACAATCCTTTACCAAGATATATCATCTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAATGAAGTGAACGAGACAATCCTTTACCAAGATATATCATCTCAA  450

seq1  AATTCATTAGAGAATACTTAGAGAAGACAAACTTTTCAAATATATTGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATTAGAGAATACTTAGAGAAGACAAACTTTTCAAATATATTGTAG  500

seq1  GTATGAATCCTTTCCTTTTGGCCTATTTCCTAGACTGTAACAGTGA--AT  548
      ||||||||||||||||||||||||| |||||||| | |||||||||  ||
seq2  GTATGAATCCTTTCCTTTTGGCCTAGTTCCTAGAATATAACAGTGAATAT  550

seq1  ACTTACAGGCTATAAACTTAACTCATGCATTGTATGAAGAAATATCTTTG  598
      |||||||||||| ||||||||||||||||||||||| ||||||| |||||
seq2  ACTTACAGGCTAGAAACTTAACTCATGCATTGTATG-AGAAATAGCTTTG  599

seq1  ACTTCATTTCAGGTCAGAGAGAACATCTAAGAACTTTTTAGGGTAAAGTA  648
      ||||||||||| ||||||||| |||||| |||   |||||||||||||||
seq2  ACTTCATTTCA-GTCAGAGAG-ACATCT-AGA--CTTTTAGGGTAAAGTA  644

seq1  TTTCTGTTGGGGAAAATGTTGTATTCTTGACAACACTTGAGGCTCCACAC  698
      |||||| | |||||||||||||| || ||||| |||| |||  |||||  
seq2  TTTCTG-TAGGGAAAATGTTGTA-TCCTGACATCACTGGAGCTTCCACCT  692

seq1  TAGAGAATTAGTATGATTATGAAAATCT  726
      ||||| ||||||||||||||| ||||||
seq2  TAGAG-ATTAGTATGATTATGGAAATCT  719