BAC Information

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BAC

Clone NameB6Ng01-116C10
Chromosome4 (Build37)
Map Location 24,204,008 - 24,205,085
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC625462, LOC383998, LOC100040464, LOC623873, LOC664973
Downstream geneF730047E07Rik, Klhl32, 1110007M04Rik, C230012O17Rik, Gpr63, Fhl5, 1810074P20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116C10.bB6Ng01-116C10.g
ACCDH921223DH921224
length1,071992
definitionDH921223|Mus musculus domesticus DNA, BAC clone: B6Ng01-116C10, 5' end.DH921224|Mus musculus domesticus DNA, BAC clone: B6Ng01-116C10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttggcagagttggaaagggcggggctcacacaactcaagccacc
agatggatcccaataagccacttttcagttttcactaattttttatttta
atgttcaaaacccaaaaccatgatctttttctacagaaaaagatttttga
agcattagcccagtatgtatcttttgtctggattgtttccaaattgcttg
caaggtacagtatagatcagctagctagcttagcaagtagacaaaagtat
gttcctgcacattgtaaatgctcagtagttactttacatgtatcttgatt
ttattacttgattttacagtggctttctgtttgactggtgccaaccaacc
acacacacataattattaccagactggcaagcacagcccagcttcaaggg
ccagacccatgcttgttctgtttacctttgttcccacaattctcacacag
aagacaggtagcttatacattgaacagaccaattttttagcagcaattca
cgatctgcaatgcaaaaagtcttggaactggtccagattaaaggaagtta
aaagttaaatctaaatgtaaatactgatatcagcttcgattctttactgt
aaggtgaaaaattaatacaaaaaggtattcagtctgtttataaaattgca
aaatggtggccagttagaaagtattgcatcagtgctaatccaccaaatca
ataaccatactgcagacttggaagaaaatatccctcctttttaggaagta
ttcactgaagttttcagttaaggatagcaattgctatagctgagcctcaa
acagtcctgtgagatgataacaaatgaaacagagtgtgaccaatagatga
aattattgtaattagtataaaaattgtataaaattgttctttatactaat
atatcctgaacttcctgtaagcttaatattttgcaaataaaaatttaaac
aaagaaatactttgcaatttatttcccataggcaatttgaagatatccct
tctttaatgcttataggaagggattttttgttttgttttgttgttgattg
ggtggttgattttttggttag
gaattctctttaatgtttctatctctttgttgaattcatctttgtgactc
tagattgtctttgttgtttcactcagcattatgtctttgtttttcttggg
catcactcgggtatttattatctttaagttcattttgttgtttacttctt
ttttaaaactccgtgaatcatttgataaagcctatagttgttcttttcaa
ttctgtgtccctgagttcatccgggtaattctcactggagaacagtttca
taggactggtggatttagggaagtaccactgcaatgatctttcatattgt
ttttactttttcgatgaggtcagagtatatggatgtctttggttaattct
ctgtttgttattgacacagtagaacaaaatggataacagaatgtgaacct
gaggtagaatatgccttgggtataatatactaaggtggacacagagggct
gggttggtgcataggataggagcgctggtctctctctgagtttagaagaa
aatctcttggttggggaagatatatttagtgagaataaagtggaattgcc
taactagaccctgggacaagatgtgtaggatttggctaggctgagatgtt
tgatacggtttgggcatggcgaggatcacagaagcagcatgggtccttga
cagagcctggaggttttgagtgaggcaaggttggctgtctagtctaggta
gaaacattaggtatgggagtcaggctatatctgggggtgtgggacgattg
ctcagcggggaactcatttgcctatactctcataaggtatgcaggaccag
gatggatagagagtttagatgtggcaacaaaggacaatattttcttaatt
tttttttgttactggaaaaattataaatttgagatataatttattacaac
atgtctcccttcccttttctccctccaaacctcccacatacctctctctt
ctctgtaaactcacggctcttcttttctacttgtaataacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_24204008_24205085
seq2: B6Ng01-116C10.b_46_1116

seq1  GAATTCTTGGCAGAGTTGGAAAGGGCGGGGCTCACACAACTCAAGCCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGCAGAGTTGGAAAGGGCGGGGCTCACACAACTCAAGCCACC  50

seq1  AGATGGATCCCAATAAGCCACTTTTCAGTTTTCACTAATTTTTTATTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGATCCCAATAAGCCACTTTTCAGTTTTCACTAATTTTTTATTTTA  100

seq1  ATGTTCAAAACCCAAAACCATGATCTTTTTCTACAGAAAAAGATTTTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCAAAACCCAAAACCATGATCTTTTTCTACAGAAAAAGATTTTTGA  150

seq1  AGCATTAGCCCAGTATGTATCTTTTGTCTGGATTGTTTCCAAATTGCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTAGCCCAGTATGTATCTTTTGTCTGGATTGTTTCCAAATTGCTTG  200

seq1  CAAGGTACAGTATAGATCAGCTAGCTAGCTTAGCAAGTAGACAAAAGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTACAGTATAGATCAGCTAGCTAGCTTAGCAAGTAGACAAAAGTAT  250

seq1  GTTCCTGCACATTGTAAATGCTCAGTAGTTACTTTACATGTATCTTGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTGCACATTGTAAATGCTCAGTAGTTACTTTACATGTATCTTGATT  300

seq1  TTATTACTTGATTTTACAGTGGCTTTCTGTTTGACTGGTGCCAACCAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACTTGATTTTACAGTGGCTTTCTGTTTGACTGGTGCCAACCAACC  350

seq1  ACACACACATAATTATTACCAGACTGGCAAGCACAGCCCAGCTTCAAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACATAATTATTACCAGACTGGCAAGCACAGCCCAGCTTCAAGGG  400

seq1  CCAGACCCATGCTTGTTCTGTTTACCTTTGTTCCCACAATTCTCACACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACCCATGCTTGTTCTGTTTACCTTTGTTCCCACAATTCTCACACAG  450

seq1  AAGACAGGTAGCTTATACATTGAACAGACCAATTTTTTAGCAGCAATTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGGTAGCTTATACATTGAACAGACCAATTTTTTAGCAGCAATTCA  500

seq1  CGATCTGCAATGCAAAAAGTCTTGGAACTGGTCCAGATTAAAGGAAGTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATCTGCAATGCAAAAAGTCTTGGAACTGGTCCAGATTAAAGGAAGTTA  550

seq1  AAAGTTAAATCTAAATGTAAATACTGATATCAGCTTCGATTCTTTACTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTAAATCTAAATGTAAATACTGATATCAGCTTCGATTCTTTACTGT  600

seq1  AAGGTGAAAAATTAATACAAAAAGGTATTCAGTCTGTTTATAAAATTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGAAAAATTAATACAAAAAGGTATTCAGTCTGTTTATAAAATTGCA  650

seq1  AAATGGTGGCCAGTTAGAAAGTATTGCATCAGTGCTAATCCACCAAATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTGGCCAGTTAGAAAGTATTGCATCAGTGCTAATCCACCAAATCA  700

seq1  ATAACCATACTGCAGACTTGGAAGAAAATATCCCTCCTTTTTAGGAAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCATACTGCAGACTTGGAAGAAAATATCCCTCCTTTTTAGGAAGTA  750

seq1  TTCACTGAAGTTTTCAGTTAAGGATAGCAATTGCTATAGCTGAGCCTCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGAAGTTTTCAGTTAAGGATAGCAATTGCTATAGCTGAGCCTCAA  800

seq1  ACAGTCCTGTGAGATGATAACAAATGAAACAGAGTGTGACCAATAGATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCCTGTGAGATGATAACAAATGAAACAGAGTGTGACCAATAGATGA  850

seq1  AATTATTGTAATTAGTATAAAAATTGTATAAAATTGTTCTTTATACTAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTGTAATTAGTATAAAAATTGTATAAAATTGTTCTTTATACTAAT  900

seq1  ATATCCTGAACTTCCTGTAAGCTTAATATTTTGCAAATAAAAAATTTAAA  950
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATATCCTGAACTTCCTGTAAGCTTAATATTTTGCAAAT-AAAAATTTAAA  949

seq1  CAAAGAAATACTTTGCAATTTAATTTCCCATAGGCAATTTTGAAGATATC  1000
      ||||||||||||||||||||| ||||||||||||||| ||||||||||| 
seq2  CAAAGAAATACTTTGCAATTT-ATTTCCCATAGGCAA-TTTGAAGATAT-  996

seq1  CCCTTCTTTAATGCTTATAGGAAGGGATTTTTTGTTTTGTTTTGTTTGTT  1050
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CCCTTCTTTAATGCTTATAGGAAGGGATTTTTTGTTTTGTTTTG-TTGTT  1045

seq1  GATTGGTTGGTTGATTTTTTTTGGTTAG  1078
      |||||| |||||||  ||||||||||||
seq2  GATTGGGTGGTTGA--TTTTTTGGTTAG  1071