BAC Information

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BAC

Clone NameB6Ng01-117F02
Chromosome4 (Build37)
Map Location 147,049,291 - 147,050,069
singlet/doubletsinglet
Overlap geneLOC100043100
Upstream geneMGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618
Downstream geneLOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7, Exosc10, LOC100043151, Srm, Masp2, Tardbp, Gm572
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-117F02.bB6Ng01-117F02.g
ACCDH922088DH922089
length1,225965
definitionDH922088|Mus musculus domesticus DNA, BAC clone: B6Ng01-117F02, 5' end.DH922089|Mus musculus domesticus DNA, BAC clone: B6Ng01-117F02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttcttgaaaactttgctgttaaaatggtggttttttaaaatga
aattcccaagcccatagtacacttcctatcaataactggtcaatttcatt
attaccctgtgccagagagcctggcaaacctgtatgtgttcttatatgtc
ttatatatagtcaattactcttatttctgattatttattgtagttgaata
aatagtgaagtcaattcagaatcatcctaagtaagatcaagagtctctat
gtgtaaaacaaacgtttctgtatactgacagttagttactatgttaagac
acttgaaaatctgagaacaccatgagtattgcacgtaattaagatttttg
aactgatttctagggactgccagccaccttacttaaatcttctgcctttc
ctgattttttagcctcagtgtaaaatggagcggctccagatattggaatt
ccctttagtgtatgagggaaaatccaagtagtccattttatgaactgaag
ccacttgtttttagggtatctgttgttaataactccaagaaattactgca
tgctttttaccaaagttcatgttgtgtccatagtgagtcaatctctgcat
taataaatggtaccacgatttcagctggatccattccaactaatttttga
agtctctctcttttttttaataacaattcagagaccatctctatgtaggc
ttttaatttcttaccctgtttatgtgctaaaaatatccattctaatatat
aatcttccatctgcatgagcattcctgtatgggaatgagtacaaggtaag
ataactaagatgcagggcattttggaacaatatgaactagtttgtgtatc
ctgcatttacctttctttccagagctaagtccttctcagtcttggctggt
aattttccttgggctatttatatctttatcaccttgtaagggtttgaaat
aaattgcttagcacttgattggccaagccaattgtaggccacagccagtt
agtatcttccaatatttctgaaaatcattgaggagtcctcaaatggtctt
actgatttgcaccttttgtggacctatctttttgcagacttaattttagg
tatacatttaagaggccactcgttatatttttcagggggattgcatcttc
agcagcaggtgtttgttgattttcgtatgttttggatcttttctcacgac
acgtctcttcccggatacttctaac
gaattctctgatgaatactaagacaggattgttgggtaaagcatttgtca
cattcactgcatttgtaaggtttctctcctgtatgaattctctgatgaat
actaagattggattgtttggtaaagcatttgtcacattcactgcatttgt
aaggtttctctcctgtatgaattctctgatgaattctcagactgcttttt
tcagtaaagcatttgtcacattcactgcatttgtaaggtttctctcctgt
atgaattctctgatgaatactaagacaggattgttgggtaaagcatttgt
cacattcactgcatttgtaaggtttctctcctgtatgaattctctgatga
atactaagattggattgtttggtaaaacatttgtcacattcactgcattt
gtaaggtttctctcctgtatgaattctctgatgcatagtaagattgaatt
tgtttttaaaacatttgtcacattcactacatttgtaaattttctcttct
gtatgaatttcctgatgaatactaagatggatctgatgggtaaagcattt
gtcacttttactactttcgtaaggtttctttccatgataaattctctgct
gactttgtagtttttctctgtgggtaagatatttgtgaaattcactacat
ttgtaagggttccctgcaatattgtcttttttcaccatgactttatgttt
agaaacaaaaaccttctctaattctgcatttcgggttgtgtttttttctt
ctgcatgttaattcctttgattgagactaatggtagaaaacaaacttaaa
ctgtttacagagtcattgtatttgcaaacttttttagtgttcctggggct
taagtcttttttggttccgagaattgaagagcatcagagctggtggttaa
gttttgtaaaggtgtaacactggagggattcaagaatgacctttgcttag
cttgtccccatttag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_147049291_147050069
seq2: B6Ng01-117F02.g_246_1035

seq1  CTGATGAATTCTCAGACTGCTTTTTTCAGTAAAGCATTTGCCACATTCAC  50
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CTGATGAATTCTCAGACTGCTTTTTTCAGTAAAGCATTTGTCACATTCAC  50

seq1  TGCATTTGTAAGGTTTCTCTCCTGTATGAATTCTCTGATGAATTCTCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||| || |||
seq2  TGCATTTGTAAGGTTTCTCTCCTGTATGAATTCTCTGATGAATACTAAGA  100

seq1  CTGCTTTTTTCAGTAAAGCATTTGCCACATTCACTGCATTTGTAAGGTTT  150
      | |  || ||  |||||||||||| |||||||||||||||||||||||||
seq2  CAGGATTGTTGGGTAAAGCATTTGTCACATTCACTGCATTTGTAAGGTTT  150

seq1  CTCTCCTGTATGAATTCTCTGATGAATTCTCAGACTGGTTTTATCAGTAA  200
      ||||||||||||||||||||||||||| || ||| ||| ||  |  ||||
seq2  CTCTCCTGTATGAATTCTCTGATGAATACTAAGATTGGATTGTTTGGTAA  200

seq1  AGCATTTGCCACATTCACTGCATTTGTAAGGTTTCTCTCCTTTATGAATT  250
      | |||||| |||||||||||||||||||||||||||||||| ||||||||
seq2  AACATTTGTCACATTCACTGCATTTGTAAGGTTTCTCTCCTGTATGAATT  250

seq1  CTCTGATGCATAGTAAGATTGAATTTGTTTTTAAAACATTTGTCACATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATGCATAGTAAGATTGAATTTGTTTTTAAAACATTTGTCACATTC  300

seq1  ACTACATTTGTAAATTTTCTCTTCTGTATGAATTCCCTGATGAATACTAA  350
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ACTACATTTGTAAATTTTCTCTTCTGTATGAATTTCCTGATGAATACTAA  350

seq1  GATGGATCTGATGGGTAAAGCATTTGTCACTTTTACTACTTTCGTAAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGATCTGATGGGTAAAGCATTTGTCACTTTTACTACTTTCGTAAGGT  400

seq1  TTCTTTCCATGATAAATTCTCTGCTGACTTTGTAGTTTTTCTCTCTGGGT  450
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTCTTTCCATGATAAATTCTCTGCTGACTTTGTAGTTTTTCTCTGTGGGT  450

seq1  AAGATATTTGTGAAATTCACTACATTTGTAAGGGTTCCCTGCAATATTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATTTGTGAAATTCACTACATTTGTAAGGGTTCCCTGCAATATTGT  500

seq1  CTTTTTTCACCATGACTTTATGTTTAGAAACAAAAATCTTGTCTAATTCT  550
      |||||||||||||||||||||||||||||||||||| ||| |||||||||
seq2  CTTTTTTCACCATGACTTTATGTTTAGAAACAAAAACCTTCTCTAATTCT  550

seq1  GCATTTC-GGTTGTG-TTTTTTCTTCTGCATGTTAATTCC-TTGATTGAG  597
      ||||||| ||||||| |||||||||||||||||||||||| |||||||||
seq2  GCATTTCGGGTTGTGTTTTTTTCTTCTGCATGTTAATTCCTTTGATTGAG  600

seq1  ACTAATGGTAGAAAACAAACTTAAACTGTTTACAGAGTCATTGTATTTGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATGGTAGAAAACAAACTTAAACTGTTTACAGAGTCATTGTATTTGC  650

seq1  AAACTTCTTTAGTGTTCCT-GGGCTTAAGTCTTTTTTGGGT-CGAGAATT  695
      |||||| |||||||||||| ||||||||||||||||||| | ||||||||
seq2  AAACTTTTTTAGTGTTCCTGGGGCTTAAGTCTTTTTTGGTTCCGAGAATT  700

seq1  GAAGAGCATCAGAGCT-GTGATT-AGTTTTGT-AAGGTGT-ACACTGGAG  741
      |||||||||||||||| ||| || |||||||| ||||||| |||||||||
seq2  GAAGAGCATCAGAGCTGGTGGTTAAGTTTTGTAAAGGTGTAACACTGGAG  750

seq1  GGATTCAAGAATGA-CATTGCTAAGCTTGT-CCCATTTAG  779
      |||||||||||||| | ||||| ||||||| |||||||||
seq2  GGATTCAAGAATGACCTTTGCTTAGCTTGTCCCCATTTAG  790