BAC Information

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BAC

Clone NameB6Ng01-118H10
Chromosome4 (Build37)
Map Location 46,744,567 - 46,941,631
singlet/doubletdoublet
Overlap geneGabbr2
Upstream geneLOC100040567, LOC100040580, Aldh1b1, Igfbpl1, 1300002K09Rik, Tdrd7, Tmod1, BC057893, AU014645, Xpa, LOC624430, LOC666379, LOC666389, Foxe1, 5830415F09Rik, Hemgn, LOC100040643, Anp32b, Nans, Trim14, Coro2a, Tbc1d2
Downstream geneAnks6, LOC435781, Galnt12, Col15a1, Tgfbr1, LOC666236, LOC666473, Alg2, Sec61b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118H10.bB6Ng01-118H10.g
ACCDH922935DH922936
length1,191861
definitionDH922935|Mus musculus domesticus DNA, BAC clone: B6Ng01-118H10, 5' end.DH922936|Mus musculus domesticus DNA, BAC clone: B6Ng01-118H10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(46,940,443 - 46,941,631)(46,744,567 - 46,745,427)
sequence
gaattccaggcagaacataggcaggctaggctggggcactcaaagccaat
ggaccttatcatggcctctcttgtcaaggagaaaagctactaagggtttg
tgtcacatatgaaaaccaccacatcaaatatgccaagaagctgcatttat
tgagcacttcctgtgtaccagacatttgacatattttaactcaacttccc
agatactgggaaggtactgtggccacatttgctttgcagataaggagcct
gagagaggctaagaaaggtccctaaagccccaaagcttcatttattgtga
ttcctctcccagggttgtgaagagggcactgtggcttttgttgggttggg
ggcagaaatgactcaggcaggctcacttgcagccctggtgcaccctagtg
atcgccatctgggctcagccaggagccttctcttctctgttcctaaaaat
cagtcaaggcagccgggactgctcatgctgagtcactgttctggtccagg
ctaattctgcttcataaccttgtatctgaagccagtggtgcagaggactt
taaattagcgatacaatttcaacccaattgctaaactgcctaaattatca
agtttgctcattgcaacttgaatgcatgcataattaatttttctaaagtc
tggactaaaagctgctgaaatcagatcttttttttttttttcttgaatta
gattcaaatgtcataggaagtctttggtgtgatgatgtaaccctgcactg
cacagcagcttcaagaactgtaattgagatccatcttaggaagggagtta
gatgagttagagaatgcaactatttttaaatcgaaatatgtttttggtaa
ccgaaagatggccgggtttccgttgatggcaactatgaattgtagcgttg
tcctgactctggggtagtggttatcagtattaataagactttgttagcta
acttcttttcggagctgagttttttaaagacaggggttgctgtctgtttc
cccaattgcttgtatcctcactatggggaataaatgacaggaagcacaca
gttggggtgctcaggcagtataaggtgagggtctgcattagagacatgat
ctaagagcacttacagggatagccatgttcaactcattctgagaggcaga
cagttggactggagaagccaactgttcttcaggggttcaca
gaattctggccaagagaactgccatttccccagccccagctcaggctcag
gtcgatttgtaaagcacgtcatgatttattcatgctgcctctccgggctt
cccaggatgaccttcctctcacacaaatgagcgcgactcccagaacagaa
tgtcaggcttcattaaggaaaaagccccagtgtggggacagcctttgcct
tgctccccagctccccggcctgtcattagcacttggagaattcaggtcaa
attccagaaaaccccagctggaagtgccttggagggtggggcgcaagggt
gacgcacatggagggcccacctctgagagtaggctctcctggagggcagc
tctcagggttcctctgcacccaaggctcaactgccccactggaggcatct
tggaggcagtgccaaggagccaacagagccccaggagggactgggccagc
cacagaaccaggggtacagttctgcagtgcacttgggggacaggtctctc
atccttgtgggatgccagtgaggggctggaccgctgtgtagcctagaggt
cgtcaggagaatcccagtaccaggctcatcattgttatcatcatcgttct
taaccttgcagaggggctccaagcctttgcagctgaagttgaggatgttt
ttgctctttcccaggtacttagcgaggtgcctcagggcagcacaggaccc
agctccctggcctgatgagctcagcatacactaagacaaagtccaggaag
ggcaggacactgcttattcagaaacagtggggactgggcactgccatctg
aggctgcctcacagccctgggaatacctgtgatcccaaaagcttgatgta
gtatgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_46940443_46941631
seq2: B6Ng01-118H10.b_46_1236 (reverse)

seq1  TGTGGACCCCTTGGAAGGACAGTTGGCTTCCTCAGTCCAACTGTCCTGCT  50
      |||| ||||||  |||| ||||||||||||  |||||||||||| |||| 
seq2  TGTGAACCCCT--GAAGAACAGTTGGCTTCTCCAGTCCAACTGT-CTGC-  46

seq1  CTCTCAG-ATGAGGTTGAACAT-GCTAT-CCTGTAAGGTTGCTCTTAGGA  97
      ||||||| |||| ||||||||| ||||| ||||||||  |||||||| ||
seq2  CTCTCAGAATGA-GTTGAACATGGCTATCCCTGTAAG--TGCTCTTA-GA  92

seq1  TCATGGTCTCTAATGCAGACACTCACCTTAATACTGCCTGAGCACCC--A  145
      |||| ||||||||||||||| |||||||| |||||||||||||||||  |
seq2  TCAT-GTCTCTAATGCAGACCCTCACCTT-ATACTGCCTGAGCACCCCAA  140

seq1  CTGTGTGCTTCCTGTCATTTATTCCCCATAGTGAGGATACAAGCAATTGG  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGCTTCCTGTCATTTATTCCCCATAGTGAGGATACAAGCAATTGG  190

seq1  GG-AACAGACAGCAACCCCTGTCTTTAAAAAACTCAGCTTCTGAAAGAAG  244
      || |||||||||||||||||||||||||||||||||||| |  |||||||
seq2  GGAAACAGACAGCAACCCCTGTCTTTAAAAAACTCAGCTCCGAAAAGAAG  240

seq1  TTAGCTAAC-AAGTC-TATTAATACTGATAA-CACTA-CCCAGAGTCAGG  290
      ||||||||| ||||| ||||||||||||||| ||||| ||||||||||||
seq2  TTAGCTAACAAAGTCTTATTAATACTGATAACCACTACCCCAGAGTCAGG  290

seq1  ACAACGCTACAATTCATAGTTGCCATCAACGG-AACCCGGCCATCTTTCG  339
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACAACGCTACAATTCATAGTTGCCATCAACGGAAACCCGGCCATCTTTCG  340

seq1  GTTACCAAAAACATATTTCGATTTAAAAATAGTTGCATTCTCTAACTCAT  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCAAAAACATATTTCGATTTAAAAATAGTTGCATTCTCTAACTCAT  390

seq1  CTAACTCCCTTCCTAAGATGGATCTCAATTACAGTTCTTGAAGCTGCTGT  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTCCCTTCCTAAGATGGATCTCAATTACAGTTCTTGAAGCTGCTGT  440

seq1  GCAGTGCAGGGTTACATCATCACACCAAAGACTTCCTATGACATTTGAAT  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGCAGGGTTACATCATCACACCAAAGACTTCCTATGACATTTGAAT  490

seq1  CTAATTCAAG-AAAAAAAAAAAAAGATCTGATTTCAGCAGCTTTTAGTCC  538
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTAATTCAAGAAAAAAAAAAAAAAGATCTGATTTCAGCAGCTTTTAGTCC  540

seq1  AGACTTTAGAAAAATTAATTATGCATGCATTCAAGTTGCAATGAGCAAAC  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTAGAAAAATTAATTATGCATGCATTCAAGTTGCAATGAGCAAAC  590

seq1  TTGATAATTTAGGCAGTTTAGCAATTGGGTTGAAATTGTATCGCTAATTT  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAATTTAGGCAGTTTAGCAATTGGGTTGAAATTGTATCGCTAATTT  640

seq1  AAAGTCCTCTGCACCACTGGCTTCAGATACAAGGTTATGAAGCAGAATTA  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCCTCTGCACCACTGGCTTCAGATACAAGGTTATGAAGCAGAATTA  690

seq1  GCCTGGACCAGAACAGTGACTCAGCATGAGCAGTCCCGGCTGCCTTGACT  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGACCAGAACAGTGACTCAGCATGAGCAGTCCCGGCTGCCTTGACT  740

seq1  GATTTTTAGGAACAGAGAAGAGAAGGCTCCTGGCTGAGCCCAGATGGCGA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTAGGAACAGAGAAGAGAAGGCTCCTGGCTGAGCCCAGATGGCGA  790

seq1  TCACTAGGGTGCACCAGGGCTGCAAGTGAGCCTGCCTGAGTCATTTCTGC  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAGGGTGCACCAGGGCTGCAAGTGAGCCTGCCTGAGTCATTTCTGC  840

seq1  CCCCAACCCAACAAAAGCCACAGTGCCCTCTTCACAACCCTGGGAGAGGA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAACCCAACAAAAGCCACAGTGCCCTCTTCACAACCCTGGGAGAGGA  890

seq1  ATCACAATAAATGAAGCTTTGGGGCTTTAGGGACCTTTCTTAGCCTCTCT  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAATAAATGAAGCTTTGGGGCTTTAGGGACCTTTCTTAGCCTCTCT  940

seq1  CAGGCTCCTTATCTGCAAAGCAAATGTGGCCACAGTACCTTCCCAGTATC  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTCCTTATCTGCAAAGCAAATGTGGCCACAGTACCTTCCCAGTATC  990

seq1  TGGGAAGTTGAGTTAAAATATGTCAAATGTCTGGTACACAGGAAGTGCTC  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGTTGAGTTAAAATATGTCAAATGTCTGGTACACAGGAAGTGCTC  1040

seq1  AATAAATGCAGCTTCTTGGCATATTTGATGTGGTGGTTTTCATATGTGAC  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATGCAGCTTCTTGGCATATTTGATGTGGTGGTTTTCATATGTGAC  1090

seq1  ACAAACCCTTAGTAGCTTTTCTCCTTGACAAGAGAGGCCATGATAAGGTC  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACCCTTAGTAGCTTTTCTCCTTGACAAGAGAGGCCATGATAAGGTC  1140

seq1  CATTGGCTTTGAGTGCCCCAGCCTAGCCTGCCTATGTTCTGCCTGGAATT  1188
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGCTTTGAGTGCCCCAGCCTAGCCTGCCTATGTTCTGCCTGGAATT  1190

seq1  C  1189
      |
seq2  C  1191

seq1: chr4_46744567_46745427
seq2: B6Ng01-118H10.g_71_931

seq1  GAATTCTGGCCAAGAGAACTGCCATTTCCCCAGCCCCAGCTCAGGCTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGCCAAGAGAACTGCCATTTCCCCAGCCCCAGCTCAGGCTCAG  50

seq1  GTCGATTTGTAAAGCACGTCATGATTTATTCATGCTGCCTCTCCGGGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGATTTGTAAAGCACGTCATGATTTATTCATGCTGCCTCTCCGGGCTT  100

seq1  CCCAGGATGACCTTCCTCTCACACAAATGAGCGCGACTCCCAGAACAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGATGACCTTCCTCTCACACAAATGAGCGCGACTCCCAGAACAGAA  150

seq1  TGTCAGGCTTCATTAAGGAAAAAGCCCCAGTGTGGGGACAGCCTTTGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGGCTTCATTAAGGAAAAAGCCCCAGTGTGGGGACAGCCTTTGCCT  200

seq1  TGCTCCCCAGCTCCCCGGCCTGTCATTAGCACTTGGAGAATTCAGGTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCCCAGCTCCCCGGCCTGTCATTAGCACTTGGAGAATTCAGGTCAA  250

seq1  ATTCCAGAAAACCCCAGCTGGAAGTGCCTTGGAGGGTGGGGCGCAAGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGAAAACCCCAGCTGGAAGTGCCTTGGAGGGTGGGGCGCAAGGGT  300

seq1  GACGCACATGGAGGGCCCACCTCTGAGAGTAGGCTCTCCTGGAGGGCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGCACATGGAGGGCCCACCTCTGAGAGTAGGCTCTCCTGGAGGGCAGC  350

seq1  TCTCAGGGTTCCTCTGCACCCAAGGCTCAACTGCCCCACTGGAGGCATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGGTTCCTCTGCACCCAAGGCTCAACTGCCCCACTGGAGGCATCT  400

seq1  TGGAGGCAGTGCCAAGGAGCCAACAGAGCCCCAGGAGGGACTGGGCCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGCAGTGCCAAGGAGCCAACAGAGCCCCAGGAGGGACTGGGCCAGC  450

seq1  CACAGAACCAGGGGTACAGTTCTGCAGTGCACTTGGGGGACAGGTCTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAACCAGGGGTACAGTTCTGCAGTGCACTTGGGGGACAGGTCTCTC  500

seq1  ATCCTTGTGGGATGCCAGTGAGGGGCTGGACCGCTGTGTAGCCTAGAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTGTGGGATGCCAGTGAGGGGCTGGACCGCTGTGTAGCCTAGAGGT  550

seq1  CGTCAGGAGAATCCCAGTACCAGGCTCATCATTGTTATCATCATCGTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCAGGAGAATCCCAGTACCAGGCTCATCATTGTTATCATCATCGTTCT  600

seq1  TAACCTTGCAGAGGGGCTCCAAGCCTTTGCAGCTGAAGTTGAGGATGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTTGCAGAGGGGCTCCAAGCCTTTGCAGCTGAAGTTGAGGATGTTT  650

seq1  TTGCTCTTTCCCAGGTACTTAGCGAGGTGCCTCAGGGCAGCACAGGACCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTTTCCCAGGTACTTAGCGAGGTGCCTCAGGGCAGCACAGGACCC  700

seq1  AGCTCCCTGGCCTGATGAGCTCAGCATACACTAAGACAAAGTCCAGGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCCTGGCCTGATGAGCTCAGCATACACTAAGACAAAGTCCAGGAAG  750

seq1  GGCAGGACACTGCTTATTCAGAAACAGTGGGGACTGGGCACTGCCATCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGACACTGCTTATTCAGAAACAGTGGGGACTGGGCACTGCCATCTG  800

seq1  AGGCTGCCTCACAGCCCTGGGAATACCTGTGATCCCAAAAGCTTGATGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGCCTCACAGCCCTGGGAATACCTGTGATCCCAAAAGCTTGATGTA  850

seq1  GTATGTGTGTG  861
      |||||||||||
seq2  GTATGTGTGTG  861