BAC Information

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BAC

Clone NameB6Ng01-118L05
Chromosome4 (Build37)
Map Location 94,061,269 - 94,163,740
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream gene5830433M19Rik, Plaa, LOC667250, Lrrc19, Ift74, Tek, 4930579C15Rik, LOC100039252, Mysm1, LOC100039265, LOC665029, Jun, LOC100042411
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118L05.bB6Ng01-118L05.g
ACCDH923109DH923110
length1,168782
definitionDH923109|Mus musculus domesticus DNA, BAC clone: B6Ng01-118L05, 5' end.DH923110|Mus musculus domesticus DNA, BAC clone: B6Ng01-118L05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,061,269 - 94,062,455)(94,163,211 - 94,163,740)
sequence
gaattcccacaatttagtcattctattctgacacattcaggcccagtgag
ctgcttcttatcactaagactttgataattggcttagacatatcaaataa
actttctggagaattcagttgtaagcaggtatgacatcctaataggggtt
ttattagccctttctctgtgcagtaatgtattagcaatcactgtgacatt
ttctgctctgggggcttttggccttgctcattttttacacttgctagaaa
ataaatttattcacggtagagatctaatccaatacactacagtgtttact
atgctttctaaagggacaggcttcaaagaattaatggaaagtgacatata
catcataggagaaaatgttctgtctccagccgggcatagctgaagagcga
gaatcccttgtggttctagcaacttggggattgtgtcagcacagattttc
tgtccctttccccagtcacactttagttttttaaaacatctaagaaacag
aagggaggcaaaagagccaatagtgtagatggattaaatttctctcctca
tcaacaattgtaggttaaagcatttctctgagacttccactactgagata
atactaatatgctttttaaaatcgttttcttatttatttattgtgggtgt
tcatttctgagtatatgtgcaggcatgcatatgaaggtcaaagaacaact
tgtgggaaccagtttactcctctcaccaggtgggtcccaaggatcaaact
caagctgtcatgtcagccttgacggcagttttcttgagccttttctccaa
ccctagtgcacttctgtcaaaaaaaaaaaaaaaaaatcaacagaggacct
tggtgtcaagtctatggagtgaatgtggtttgattcccacattctatatg
agaatagcttagaatctgtggctctgttctctgaatacagaactatcata
tagctatcctcaaaacttaatgtatccccttttgtcatgggctgtgtgac
tgagtgggggaggaaagctgtcagttatatgtctgtgcatacgtgcagta
gactttgttcacctcactgaattacaaggcagtgtagagaaagacatcat
cagaccctgcatgcactttagtgatccctattattagaatcattcgaaga
atcgtgtactgcacaaga
gaattcctcagggatcagttttttcttcatattcaagaaggggtggtaga
gaagcaatatacctggtcccaagatgtctataatcttcagacactgcaga
acatcatggttagtcaagttggcagccatcttcctatttttacattgcca
tcttatattcaagtagactttaaaaaaatgattttctgttttcatttata
tgtgtttgtgtgtatgtgaacacaggttcctgtggagcctctgaagctgg
agttacaggcagttgtgagcaaccttctttgagtactgggaacccactcg
ggatacctttaaagggcagtagatacttaactcgctctgccacctctcca
gctccactagactttgagacgaaaatttttaattaaaaatcaattttatt
ggggctggcaagatggttcagtggttaagagcactgactgctcttccaga
ggtcctgagttcaattctcagcaaccacatggtggctcacaaccatctgt
aaagggatccggtgccctcttctggtgtgtctgaagatagctacagtgta
cttatatacataaataaatctttttaaaaaataaattttatttatttttg
catgtgagtcctcacaattgtgtgtgtgtgtgtgtgtgtgtgtgtgtgta
gatgagtggacaacttaggagttacttttcttcttgcatcctgtgggttc
tgcaaatgcaattaggtcttcagggtcgaagcattttggttttgcccagt
cagtcatcttgttggccagagacatggttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_94061269_94062455
seq2: B6Ng01-118L05.b_47_1214

seq1  GAATTCCCACAATTTAGTCATTCTATTCTGACACATTCAGGCCCAGTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCACAATTTAGTCATTCTATTCTGACACATTCAGGCCCAGTGAG  50

seq1  CTGCTTCTTATCACTAAGACTTTGATAATTGGCTTAGACATATCAAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCTTATCACTAAGACTTTGATAATTGGCTTAGACATATCAAATAA  100

seq1  ACTTTCTGGAGAATTCAGTTGTAAGCAGGTATGACATCCTAATAGGGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTGGAGAATTCAGTTGTAAGCAGGTATGACATCCTAATAGGGGTT  150

seq1  TTATTAGCCCTTTCTCTGTGCAGTAATGTATTAGCAATCACTGTGACATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGCCCTTTCTCTGTGCAGTAATGTATTAGCAATCACTGTGACATT  200

seq1  TTCTGCTCTGGGGGCTTTTGGCCTTGCTCATTTTTTACACTTGCTAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTCTGGGGGCTTTTGGCCTTGCTCATTTTTTACACTTGCTAGAAA  250

seq1  ATAAATTTATTCACGGTAGAGATCTAATCCAATACACTACAGTGTTTACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTTATTCACGGTAGAGATCTAATCCAATACACTACAGTGTTTACT  300

seq1  ATGCTTTCTAAAGGGACAGGCTTCAAAGAATTAATGGAAAGTGACATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTCTAAAGGGACAGGCTTCAAAGAATTAATGGAAAGTGACATATA  350

seq1  CATCATAGGAGAAAATGTTCTGTCTCCAGCCGGGCATAGCTGAAGAGCGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATAGGAGAAAATGTTCTGTCTCCAGCCGGGCATAGCTGAAGAGCGA  400

seq1  GAATCCCTTGTGGTTCTAGCAACTTGGGGATTGTGTCAGCACAGATTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCCTTGTGGTTCTAGCAACTTGGGGATTGTGTCAGCACAGATTTTC  450

seq1  TGTCCCTTTCCCCAGTCACACTTTAGTTTTTTAAAACATCTAAGAAACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTTTCCCCAGTCACACTTTAGTTTTTTAAAACATCTAAGAAACAG  500

seq1  AAGGGAGGCAAAAGAGCCAATAGTGTAGATGGATTAAATTTCTCTCCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGGCAAAAGAGCCAATAGTGTAGATGGATTAAATTTCTCTCCTCA  550

seq1  TCAACAATTGTAGGTTAAAGCATTTCTCTGAGACTTCCACTACTGAGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAATTGTAGGTTAAAGCATTTCTCTGAGACTTCCACTACTGAGATA  600

seq1  ATACTAATATGCTTTTTAAAATCGTTTTCTTATTTATTTATTGTGGGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAATATGCTTTTTAAAATCGTTTTCTTATTTATTTATTGTGGGTGT  650

seq1  TCATTTCTGAGTATATGTGCAGGCATGCATATGAAGGTCAAAGAACAACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCTGAGTATATGTGCAGGCATGCATATGAAGGTCAAAGAACAACT  700

seq1  TGTGGGAACCAGTTTACTCCTCTCACCAGGTGGGTCCCAAGGATCAAACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGAACCAGTTTACTCCTCTCACCAGGTGGGTCCCAAGGATCAAACT  750

seq1  CAAGCTGTCATGTCAGCCTTGACGGCAGTTTTCTTGAGCCTTTTCTCCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTGTCATGTCAGCCTTGACGGCAGTTTTCTTGAGCCTTTTCTCCAA  800

seq1  CCCTAGTGCACTTCTGTC-AAAAAAAAAAAAAAAAATCAACAGAGGACCT  849
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCCTAGTGCACTTCTGTCAAAAAAAAAAAAAAAAAATCAACAGAGGACCT  850

seq1  TGGTGTCAAGTCTATGGAGTGAATGTGGTTTGATTCCCACATTCTATATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTCAAGTCTATGGAGTGAATGTGGTTTGATTCCCACATTCTATATG  900

seq1  AGAATAGCTTAGAATCTGTGGCTCTGTTCTCTGAATACAGAACTATCATT  949
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AGAATAGCTTAGAATCTGTGGCTCTGTTCTCTGAATACAGAACTATCA-T  949

seq1  ATAGCTATCCTCAAAACTTAATGTATTCCCCTTTTTGTCATGGGCTGTGT  999
      ||||||||||||||||||||||||||  ||| ||||||||||||||||||
seq2  ATAGCTATCCTCAAAACTTAATGTAT--CCCCTTTTGTCATGGGCTGTGT  997

seq1  GACCTGAGT-GGGGAGGAAAGCTGTCAGTTATATGTCTGTGCATACGTGC  1048
      || |||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GA-CTGAGTGGGGGAGGAAAGCTGTCAGTTATATGTCTGTGCATACGTGC  1046

seq1  AGTAGACTTTGTTCAACCTCACTGATTTACCAAGGGCAGTGTAGAGGAAA  1098
      |||||||||||||| |||||||||| ||||  | ||||||||||| ||||
seq2  AGTAGACTTTGTTC-ACCTCACTGAATTAC--AAGGCAGTGTAGA-GAAA  1092

seq1  GACATCATTCAGGACCCTGGCCATGGCACTTTAGTGATCCCTATTAATTT  1148
      ||||||| ||| |||||||  ||| |||||||||||||||||||||   |
seq2  GACATCA-TCA-GACCCTG--CAT-GCACTTTAGTGATCCCTATTA---T  1134

seq1  AAGAATCACATCAGAAGGAAATCGTGTACTGCAGCAAGA  1187
       |||||  |||  ||||  |||||||||||||| |||||
seq2  TAGAAT--CATTCGAAG--AATCGTGTACTGCA-CAAGA  1168

seq1: chr4_94163211_94163740
seq2: B6Ng01-118L05.g_69_598 (reverse)

seq1  ACACACCAGAAGAGGGCACCGGATCCCTTTACAGATGGTTGTGAGCCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCAGAAGAGGGCACCGGATCCCTTTACAGATGGTTGTGAGCCACC  50

seq1  ATGTGGTTGCTGAGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGTTGCTGAGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGC  100

seq1  TCTTAACCACTGAACCATCTTGCCAGCCCCAATAAAATTGATTTTTAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAACCACTGAACCATCTTGCCAGCCCCAATAAAATTGATTTTTAATT  150

seq1  AAAAATTTTCGTCTCAAAGTCTAGTGGAGCTGGAGAGGTGGCAGAGCGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTTTCGTCTCAAAGTCTAGTGGAGCTGGAGAGGTGGCAGAGCGAG  200

seq1  TTAAGTATCTACTGCCCTTTAAAGGTATCCCGAGTGGGTTCCCAGTACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTATCTACTGCCCTTTAAAGGTATCCCGAGTGGGTTCCCAGTACTC  250

seq1  AAAGAAGGTTGCTCACAACTGCCTGTAACTCCAGCTTCAGAGGCTCCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGGTTGCTCACAACTGCCTGTAACTCCAGCTTCAGAGGCTCCACA  300

seq1  GGAACCTGTGTTCACATACACACAAACACATATAAATGAAAACAGAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCTGTGTTCACATACACACAAACACATATAAATGAAAACAGAAAAT  350

seq1  CATTTTTTTAAAGTCTACTTGAATATAAGATGGCAATGTAAAAATAGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTTTAAAGTCTACTTGAATATAAGATGGCAATGTAAAAATAGGAA  400

seq1  GATGGCTGCCAACTTGACTAACCATGATGTTCTGCAGTGTCTGAAGATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTGCCAACTTGACTAACCATGATGTTCTGCAGTGTCTGAAGATTA  450

seq1  TAGACATCTTGGGACCAGGTATATTGCTTCTCTACCACCCCTTCTTGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACATCTTGGGACCAGGTATATTGCTTCTCTACCACCCCTTCTTGAAT  500

seq1  ATGAAGAAAAAACTGATCCCTGAGGAATTC  530
      ||||||||||||||||||||||||||||||
seq2  ATGAAGAAAAAACTGATCCCTGAGGAATTC  530