BAC Information

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BAC

Clone NameB6Ng01-119B03
Chromosome4 (Build37)
Map Location 61,749,173 - 61,750,166
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039063, LOC667234, LOC100039089, LOC667239, LOC100039116, LOC667242, LOC100039150, LOC100039019, LOC100039177, LOC621093, LOC100039206, LOC621127, LOC100039228, LOC384021, LOC100039247, LOC667278, Mup5, LOC435785, LOC667295, LOC100039305, LOC546832, OTTMUSG00000007485, Mup3
Downstream geneLOC100039345, OTTMUSG00000000231, Zfp37, Slc31a2, Fkbp15, Slc31a1, Cdc26, Prpf4, Rnf183, Wdr31, Bspry, Hdhd3, Alad, Pole3, 4933430I17Rik, Rgs3, Zfp618
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119B03.bB6Ng01-119B03.g
ACCDH923379DH923380
length1,242985
definitionDH923379|Mus musculus domesticus DNA, BAC clone: B6Ng01-119B03, 5' end.DH923380|Mus musculus domesticus DNA, BAC clone: B6Ng01-119B03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaaatgccacacgatcacagatagattctatcttcagctggtta
aaacatgcctctgccagagcacggggcaaaccagtcagctgctgtgaagt
ctccccatatactcatatctgggattaacacaaagacatagacgtataat
atttctctctctcttttttaagaaataaaaatccagaattctcattacat
ttccccctttctgttttaagccatcaactatgctggatgtagcaggaaaa
tataatcagagacactgtaaatgaactaagcacttatcacatcagtggcc
aaggttttcaggggacctctcctgctgaattgtaatctacataagtttcg
atggtatacacaacttttgatttcctgtggaaatataatcaagtctgcaa
ccccaatgcaaaatgttttctggcttccattctgtttcaacacatcctta
caatatatgggttgtgtcttagggtttctattcctgcacaaacatcatga
ccaagaagcaagttggggaggaaagggtttatttggcttacacttccatg
ctgctgttcatcaccaaaggaagtcaggactggaactcaagcagggtagg
gagcaggagctgatgcagaggccatggagggatgttctttactagcctgc
ctcccgtggcttgctcagcctgctctcttatagaacccaagactaccagc
ccagagatggtcccacccacaaggggcctttcccccttgatcactaattg
agaaaatgccttagagttggatctcatggaggcatttcctcaactgaagc
tcctttctctgtgataaccccagctgtgtcaagttgacacaaaactagcc
agtacaggttgatttaatttcacaatttttttctataatcaagtgtctct
tggctgctatagttcctttttcattaagaaaatttaagttaacaaagtac
tatgtagtttgtccctgggagactttattcttccttttgttatataagca
tttcctttaaggggtgatcagatctttgtaccaatgcttgtcctgtggga
ttctgagtatatcttgtatatgcttaaaatataagatgcttccccttatg
gagaatttgttggggcattgtagtcttaattcagtaaacaagagcatgac
ttccagtaaggtgcctacgatcagcctctccggcctaagactttgttctt
ttgtaacctggaattggactacagggatggggtaagttttag
gaattcaactgactggacataatctcattaatgaaaaacgtaagtattgt
gcaaagttgtatttgctgattgaggtccaagtacaaatcatgccaaaaat
catgctcccaaagacatacagttacaattggaacatattttgtatcagta
gacatttcatttacccttgaactagaaacataaactactgtttgatgtga
ggaaataaagaattcaagaatgaggcaaatacttgatatgcttcacttca
actttgaatcagttttatatggtatgtactattttattcttcttaccata
gtattagtaagactcagaaagattaagtaactgcataaggtcatatagtc
agtcaatgtgagaacttagatttaaacccaagactctctaactcaggagc
ctttgttcttattgactccactacagaggtcaggatgttttacaatgtag
gggggaatggttaaatagggaaagaggaatagatagtgctatagagttcc
agacatgtcagactggcagatactagcaaagaaactgcacatggtttctt
taaaataagaggagttggtgaggcccaagattgaatgtggcaatgacaac
tggctctctttggtctacaagggtttggtagatgctctactaggggatta
tcacattcttccccccttctcctcctcctccctctcctcctcttcttcct
cctccttcacctcctcctcctcctcttcctcttctttccaccctcttcca
tttttcattgatatgtgcacacctgtgaacacactaatgcttttgataat
atatgcagaaatcagcacaggacatcaattgtctccctctatctattttt
acatcatcccctcgagtaaggtcttcctctgatctgggaattagtgtgtt
cagatagctggatgtccaccagtcccagcaatcctccatctcaccactac
ccggtgtggggttaatagcagcctgaccagctatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_61749173_61750166
seq2: B6Ng01-119B03.g_67_1051

seq1  GAATTCAACTGACTGGACATAATCTCATTAATGAAAAACGTAAGTATTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTGACTGGACATAATCTCATTAATGAAAAACGTAAGTATTGT  50

seq1  GCAAAGTTGTATTTGCTGATTGAGGTCCAAGTACAAATCATGCCAAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGTTGTATTTGCTGATTGAGGTCCAAGTACAAATCATGCCAAAAAT  100

seq1  CATGCTCCCAAAGACATACAGTTACAATTGGAACATATTTTGTATCAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTCCCAAAGACATACAGTTACAATTGGAACATATTTTGTATCAGTA  150

seq1  GACATTTCATTTACCCTTGAACTAGAAACATAAACTACTGTTTGATGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTCATTTACCCTTGAACTAGAAACATAAACTACTGTTTGATGTGA  200

seq1  GGAAATAAAGAATTCAAGAATGAGGCAAATACTTGATATGCTTCACTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATAAAGAATTCAAGAATGAGGCAAATACTTGATATGCTTCACTTCA  250

seq1  ACTTTGAATCAGTTTTATATGGTATGTACTATTTTATTCTTCTTACCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGAATCAGTTTTATATGGTATGTACTATTTTATTCTTCTTACCATA  300

seq1  GTATTAGTAAGACTCAGAAAGATTAAGTAACTGCATAAGGTCATATAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTAGTAAGACTCAGAAAGATTAAGTAACTGCATAAGGTCATATAGTC  350

seq1  AGTCAATGTGAGAACTTAGATTTAAACCCAAGACTCTCTAACTCAGGAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAATGTGAGAACTTAGATTTAAACCCAAGACTCTCTAACTCAGGAGC  400

seq1  CTTTGTTCTTATTGACTCCACTACAGAGGTCAGGATGTTTTACAATGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTCTTATTGACTCCACTACAGAGGTCAGGATGTTTTACAATGTAG  450

seq1  GGGGGAATGGTTAAATAGGGAAAGAGGAATAGATAGTGCTATAGAGTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAATGGTTAAATAGGGAAAGAGGAATAGATAGTGCTATAGAGTTCC  500

seq1  AGACATGTCAGACTGGCAGATACTAGCAAAGAAACTGCACATGGTTTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGTCAGACTGGCAGATACTAGCAAAGAAACTGCACATGGTTTCTT  550

seq1  TAAAATAAGAGGAGTTGGTGAGGCCCAAGATTGAATGTGGCAATGACAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAGAGGAGTTGGTGAGGCCCAAGATTGAATGTGGCAATGACAAC  600

seq1  TGGCTCTCTTTGGTCTACAAGGGTTTGGTAGATGCTCTACTAGGGGATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCTCTTTGGTCTACAAGGGTTTGGTAGATGCTCTACTAGGGGATTA  650

seq1  TCACATTCTTCCCCCCTTCTCCTCCTCCTCCCTCTCCTCCTCTTCTTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTCTTCCCCCCTTCTCCTCCTCCTCCCTCTCCTCCTCTTCTTCCT  700

seq1  CCTCCTTCCCCTCCTCCTCCTCCTCTTCCTCTTCTTTCCACCCTCTTCCA  750
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTTCACCTCCTCCTCCTCCTCTTCCTCTTCTTTCCACCCTCTTCCA  750

seq1  TTTTTCATTGATATGTGCACACCTGTGAACACACTAATGCTTTTGATAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCATTGATATGTGCACACCTGTGAACACACTAATGCTTTTGATAAT  800

seq1  ATATGCAGAAATCAGCACAGGACATCAATTGTCTCCCTCTATCTATTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCAGAAATCAGCACAGGACATCAATTGTCTCCCTCTATCTATTTTT  850

seq1  ACATCATCCCCTCGAGTAAGGGTCTCCCTCTGAATCTGGGAATTAGTGTG  900
      ||||||||||||||||||| ||||| |||||| |||||||||||||||||
seq2  ACATCATCCCCTCGAGTAA-GGTCTTCCTCTG-ATCTGGGAATTAGTGTG  898

seq1  TTTCAGATAGGCTGGATGTCCACCAGTCCCAGCAATCCTCCAGTCTCCAC  950
       |||||||| |||||||||||||||||||||||||||||||| ||| |||
seq2  -TTCAGATA-GCTGGATGTCCACCAGTCCCAGCAATCCTCCA-TCT-CAC  944

seq1  CATCTACCCAGTGGTGGGGTTAAAAGCAGCCCTGACCAGCTATT  994
      || |||||| || |||||||||| ||||| ||||||||||||||
seq2  CA-CTACCCGGT-GTGGGGTTAATAGCAG-CCTGACCAGCTATT  985