BAC Information

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BAC

Clone NameB6Ng01-119F10
Chromosome4 (Build37)
Map Location 64,198,820 - 64,317,396
singlet/doubletdoublet
Overlap genenone
Upstream geneAtp6v1g1, 6330416G13Rik, LOC670833, 1700018C11Rik, LOC667451, Tnfsf15, Tnfsf8, Rpl17-ps, Tnc
Downstream genePappa, Astn2, Trim32
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119F10.bB6Ng01-119F10.g
ACCDH923583DH923584
length1,1181,080
definitionDH923583|Mus musculus domesticus DNA, BAC clone: B6Ng01-119F10, 5' end.DH923584|Mus musculus domesticus DNA, BAC clone: B6Ng01-119F10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,316,262 - 64,317,396)(64,198,820 - 64,199,909)
sequence
gaattccatttctgtcactcgtaatgtaaagagttttgggaactatttat
atatgggaatttcatgtatgactttatttaaggaaaggttctttcccact
gcttttgtctgccaaaatataaatttggtaactactgatctcatccaatg
taatcatttgcagaggaggtaactaaagcaaatgacaggatcatttcctg
aagttatacagtgaacacatgcagagctggtaccagaaggcaagactaat
gctatgtgtagcagcttgtctcgtgctgacatgtctgtacatgtgtgtaa
tgccaccaaccatctctaggcaatgtcactgggacctacaaaatataaag
aaatgatatttgcatgctggccaagagataaatatttaaataagaatgct
tatctgttcttacaaagatctcaccatagtcacatacaaagatgtattga
gcaaaagcaaagaaaattttactcaatccaccagagggtctgaaaatgac
cttttaggattcttggaagcccattgtccccacagggccagtttgtctgg
actcttagtagtttctcataatggaactggtacactacctcctgggtatg
ctggttgcttggcttaccttttcaagttaaaaaagtgttaacattaacta
gagttttggactttagagccaaaggggcctttatgaataacctaattcat
tactactagtttataaatgaagatacagactaaaagtggatgggaaaatg
tcttcctactatcagttaccagttacaagaagagagaaaatgtgagccca
aatattccagctttccctctctctgcccagtgcctagttctgacactgaa
gagtgcttaaagaatgaagtagtcaactttgataccttggcaaagacagg
aggaaatggagatacaggagtctccaggtagagcagttgtaggcagtctc
tagttcagtagatgagtttcaaatatctttcattctttcttaatttattc
taaaggagatgagatagtagggtgcacctatgcctatacatagtagacag
tctaagcaagttctattatgctatagagattaggacttctattaagatgt
atttttctaatagaaatt
gaattctttgtgcaagaaaatctcgtaagcagcgagaggttatgagcctt
ggatggagtatccaataagaagttttagatactgattctgaaatcattga
ctccgtgattctgaatgaagtgtgctcattgatttcacgtagaacctgct
tacttcttaactggcaaaggaatacactatggagacagaggggaggattt
ctcagactctgagttagttataaaagttgtcaaagtaacgcaatgtcaaa
tgctttcaaagaggaaacttcacgaaaaacagctatatctcaaatgtcca
gcacataaatataaacagatttgttctacacaggccattaattgctttca
caaagtcagtgtgcttacttgaaccctacttgaactagctgtttgctggt
gcagtcactactgaaagaaagatttcttaaaggctttgggttgctcccac
ttcttgtcatagaatgatccaaattttatgtctgtttattactttgtagc
ccagctggaccccagaaggatggagttgttgcgaccatggaaaaacacaa
ctgcacacagataccgaaatgaagccagtgatgtcctggaggcttagata
aacatttagtctcataaataaatacattatcagaccacacaaaatatttc
ttaaccagacgcctcctcagaagtcatcttccaagtatcattttaagttt
ttccatgttcgaagaatcaagaaggttattgatcatgtacgggctaacca
accctaactatatgtttccagacaatatagtaatatggtttcttgtagac
attgatatagaatctgaacacatacttaagtagccaataacattccaggg
tgaatatcaacttgcaacacagtagacaacagattgtaatgtaagaattt
ttcatttcttttctcaaaagatatattcacttttccttgattaaacaaac
atctaaacattcttgttgaccaggcactctcctagacactgaacagtagc
tgaaaacctgcttcatttgtaaatcatcccttactgatataagagttact
ctgtaggtgggcattgtcagatgctgagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_64316262_64317396
seq2: B6Ng01-119F10.b_46_1163 (reverse)

seq1  AATTTCTATTAGGAAAAATACATCTTTATAGGTATTTTCTATATCTTTCT  50
      ||||||||||| |||||||||||||| ||||  |  | ||| |||  |||
seq2  AATTTCTATTA-GAAAAATACATCTTAATAG--AAGTCCTA-ATC--TCT  44

seq1  ATAGCATAATAGAACTTGGCTTTTAGACTGTCTTACTATGTATAGGCATA  100
      ||||||||||||||||||    |||||||||| |||||||||||||||||
seq2  ATAGCATAATAGAACTTG---CTTAGACTGTC-TACTATGTATAGGCATA  90

seq1  GGTTGCACCCTACCTATTCTTCATCTCCTTTAGAATAAATTAACACAAGA  150
      || ||||||||| ||||   ||||||||||||||||||||||| | ||||
seq2  GG-TGCACCCTA-CTAT--CTCATCTCCTTTAGAATAAATTAAGA-AAGA  135

seq1  ATGAAAGATATTTGAAACTCATTCTTACTGAACTAGAGACTGCCTACAAC  200
      ||||||||||||||||||||||   |||||||||||||||||||||||||
seq2  ATGAAAGATATTTGAAACTCAT--CTACTGAACTAGAGACTGCCTACAAC  183

seq1  TGCTCTACCTGGAGACTCCTGTATCTCCATTTCCTCCTGTCTTTGCCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTACCTGGAGACTCCTGTATCTCCATTTCCTCCTGTCTTTGCCAAG  233

seq1  GTATCAAAGTTGACTACTTCATTCTTTAAGCACTCTTCAGTGTCAGAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAAAGTTGACTACTTCATTCTTTAAGCACTCTTCAGTGTCAGAACT  283

seq1  AGGCACTGGGCAGAGAGAGGGAAAGCTGGAATATTTGGGCTCACATTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACTGGGCAGAGAGAGGGAAAGCTGGAATATTTGGGCTCACATTTTC  333

seq1  TCTCTTCTTGTAACTGGTAACTGATAGTAGGAAGACATTTTCCCATCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCTTGTAACTGGTAACTGATAGTAGGAAGACATTTTCCCATCCAC  383

seq1  TTTTAGTCTGTATCTTCATTTATAAACTAGTAGTAATGAATTAGGTTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTCTGTATCTTCATTTATAAACTAGTAGTAATGAATTAGGTTATT  433

seq1  CATAAAGGCCCCTTTGGCTCTAAAGTCCAAAACTCTAGTTAATGTTAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAGGCCCCTTTGGCTCTAAAGTCCAAAACTCTAGTTAATGTTAACA  483

seq1  CTTTTTTAACTTGAAAAGGTAAGCCAAGCAACCAGCATACCCAGGAGGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTAACTTGAAAAGGTAAGCCAAGCAACCAGCATACCCAGGAGGTA  533

seq1  GTGTACCAGTTCCATTATGAGAAACTACTAAGAGTCCAGACAAACTGGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACCAGTTCCATTATGAGAAACTACTAAGAGTCCAGACAAACTGGCC  583

seq1  CTGTGGGGACAATGGGCTTCCAAGAATCCTAAAAGGTCATTTTCAGACCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGGGACAATGGGCTTCCAAGAATCCTAAAAGGTCATTTTCAGACCC  633

seq1  TCTGGTGGATTGAGTAAAATTTTCTTTGCTTTTGCTCAATACATCTTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTGGATTGAGTAAAATTTTCTTTGCTTTTGCTCAATACATCTTTGT  683

seq1  ATGTGACTATGGTGAGATCTTTGTAAGAACAGATAAGCATTCTTATTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGACTATGGTGAGATCTTTGTAAGAACAGATAAGCATTCTTATTTAA  733

seq1  ATATTTATCTCTTGGCCAGCATGCAAATATCATTTCTTTATATTTTGTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATCTCTTGGCCAGCATGCAAATATCATTTCTTTATATTTTGTAG  783

seq1  GTCCCAGTGACATTGCCTAGAGATGGTTGGTGGCATTACACACATGTACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAGTGACATTGCCTAGAGATGGTTGGTGGCATTACACACATGTACA  833

seq1  GACATGTCAGCACGAGACAAGCTGCTACACATAGCATTAGTCTTGCCTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGTCAGCACGAGACAAGCTGCTACACATAGCATTAGTCTTGCCTTC  883

seq1  TGGTACCAGCTCTGCATGTGTTCACTGTATAACTTCAGGAAATGATCCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACCAGCTCTGCATGTGTTCACTGTATAACTTCAGGAAATGATCCTG  933

seq1  TCATTTGCTTTAGTTACCTCCTCTGCAAATGATTACATTGGATGAGATCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGCTTTAGTTACCTCCTCTGCAAATGATTACATTGGATGAGATCA  983

seq1  GTAGTTACCAAATTTATATTTTGGCAGACAAAAGCAGTGGGAAAGAACCT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTACCAAATTTATATTTTGGCAGACAAAAGCAGTGGGAAAGAACCT  1033

seq1  TTCCTTAAATAAAGTCATACATGAAATTCCCATATATAAATAGTTCCCAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTAAATAAAGTCATACATGAAATTCCCATATATAAATAGTTCCCAA  1083

seq1  AACTCTTTACATTACGAGTGACAGAAATGGAATTC  1135
      |||||||||||||||||||||||||||||||||||
seq2  AACTCTTTACATTACGAGTGACAGAAATGGAATTC  1118

seq1: chr4_64198820_64199909
seq2: B6Ng01-119F10.g_68_1147

seq1  GAATTCTTTGTGCAAGAAAATCTCGTAAGCAGCGAGAGGTTATGAGCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTGCAAGAAAATCTCGTAAGCAGCGAGAGGTTATGAGCCTT  50

seq1  GGATGGAGTATCCAATAAGAAGTTTTAGATACTGATTCTGAAATCATTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGAGTATCCAATAAGAAGTTTTAGATACTGATTCTGAAATCATTGA  100

seq1  CTCCGTGATTCTGAATGAAGTGTGCTCATTGATTTCACGTAGAACCTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGTGATTCTGAATGAAGTGTGCTCATTGATTTCACGTAGAACCTGCT  150

seq1  TACTTCTTAACTGGCAAAGGAATACACTATGGAGACAGAGGGGAGGATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCTTAACTGGCAAAGGAATACACTATGGAGACAGAGGGGAGGATTT  200

seq1  CTCAGACTCTGAGTTAGTTATAAAAGTTGTCAAAGTAACGCAATGTCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACTCTGAGTTAGTTATAAAAGTTGTCAAAGTAACGCAATGTCAAA  250

seq1  TGCTTTCAAAGAGGAAACTTCACGAAAAACAGCTATATCTCAAATGTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCAAAGAGGAAACTTCACGAAAAACAGCTATATCTCAAATGTCCA  300

seq1  GCACATAAATATAAACAGATTTGTTCTACACAGGCCATTAATTGCTTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATAAATATAAACAGATTTGTTCTACACAGGCCATTAATTGCTTTCA  350

seq1  CAAAGTCAGTGTGCTTACTTGAACCCTACTTGAACTAGCTGTTTGCTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTCAGTGTGCTTACTTGAACCCTACTTGAACTAGCTGTTTGCTGGT  400

seq1  GCAGTCACTACTGAAAGAAAGATTTCTTAAAGGCTTTGGGTTGCTCCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCACTACTGAAAGAAAGATTTCTTAAAGGCTTTGGGTTGCTCCCAC  450

seq1  TTCTTGTCATAGAATGATCCAAATTTTATGTCTGTTTATTACTTTGTAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTCATAGAATGATCCAAATTTTATGTCTGTTTATTACTTTGTAGC  500

seq1  CCAGCTGGACCCCAGAAGGATGGAGTTGTTGCGACCATGGAAAAACACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGGACCCCAGAAGGATGGAGTTGTTGCGACCATGGAAAAACACAA  550

seq1  CTGCACACAGATACCGAAATGAAGCCAGTGATGTCCTGGAGGCTTAGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACACAGATACCGAAATGAAGCCAGTGATGTCCTGGAGGCTTAGATA  600

seq1  AACATTTAGTCTCATAAATAAATACATTATCAGACCACACAAAATATTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTAGTCTCATAAATAAATACATTATCAGACCACACAAAATATTTC  650

seq1  TTAACCAGACGCCTCCTCAGAAGTCATCTTCCAAGTATCATTTTAAGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCAGACGCCTCCTCAGAAGTCATCTTCCAAGTATCATTTTAAGTTT  700

seq1  TTCCATGTTCGAAGAATCAAGAAGGTTATTGATCATGTACGGGCTAACCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATGTTCGAAGAATCAAGAAGGTTATTGATCATGTACGGGCTAACCA  750

seq1  ACCCTAACTATATGTTTCCAGACAATATAGTAATATGGTTTCTTGTAGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTAACTATATGTTTCCAGACAATATAGTAATATGGTTTCTTGTAGAC  800

seq1  ATTGATATAGAATCTGAACACATACTTAAGTAGCCAATAACATTCCAGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATATAGAATCTGAACACATACTTAAGTAGCCAATAACATTCCAGGG  850

seq1  TGAATATCAACTTGCAACACAGTAGACAACAGATTGTAATGTAAGAATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATCAACTTGCAACACAGTAGACAACAGATTGTAATGTAAGAATTT  900

seq1  TCCATTTCATTTCTCAAAAAGATATATTCACTTTTCCTTTGATTAAACAA  950
      | |||||| |||||| ||||||||||||||||||||| ||||||||||||
seq2  TTCATTTCTTTTCTC-AAAAGATATATTCACTTTTCC-TTGATTAAACAA  948

seq1  ACATCTAAACAATTCTTGTTGACCAGGCACTCTCCTAGACACTG-ACAGT  999
      |||||||||| ||||||||||||||||||||||||||||||||| |||||
seq2  ACATCTAAAC-ATTCTTGTTGACCAGGCACTCTCCTAGACACTGAACAGT  997

seq1  AGCTTGAAAAACCTTGCTTCATTTGTAAATCAATTCCCTTACTGATATAA  1049
      ||| ||||||  | ||||||||||||||||||  ||||||||||||||||
seq2  AGC-TGAAAA--CCTGCTTCATTTGTAAATCA--TCCCTTACTGATATAA  1042

seq1  GAGTTACTCTGTAGGTGGGGCATTGTTCAGGATGCTGAGAA  1090
      |||||||||||||||| |||||||| ||| |||||||||||
seq2  GAGTTACTCTGTAGGT-GGGCATTG-TCA-GATGCTGAGAA  1080