BAC Information

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BAC

Clone NameB6Ng01-119P20
Chromosome4 (Build37)
Map Location 83,130,661 - 83,131,727
singlet/doubletsinglet
Overlap genePsip1
Upstream geneNfib, Zdhhc21, Cer1, Frem1, LOC667985, 1810054D07Rik, Snapc3
Downstream geneLOC100040611, 4930473A06Rik, LOC668010, Bnc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119P20.bB6Ng01-119P20.g
ACCDH924056DH924057
length1,1571,047
definitionDH924056|Mus musculus domesticus DNA, BAC clone: B6Ng01-119P20, 5' end.DH924057|Mus musculus domesticus DNA, BAC clone: B6Ng01-119P20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaaa
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaca
cagaagtggatgctcacagtcagctcatggatggatcacagggctcccaa
tggaggagctagagaagtacccaaggagctaaagggatctcaccctatag
gtggacacattatgaactacagtaccctgagctcttgactctagctgcat
atgtatcaaagatggctagtcggcatcactggaagagaaggccatggaac
cgcggacttgtggtgccctggttaatgggaaacgccaggcccaaaggagg
gggcatt
gaattcattatttttaagtaatacctttcaaagattaaattagttacgtg
cataaaaaaaatagccaggcagtggtagtgtacgcctttagtcccagcac
tccagaagcagaggcaggtagatctccgagtttgaagccagcctggtcta
cgagtgagttccagaacaatcagcgctacacagagaaactgtcttgaaaa
tgaaaataaaaaataggttgtatgaaaaaataattacaattttagaacat
gagtctatttttgagtttatctaataaccttctttaagtcttatctatag
tattctgaaccttgacaccattataaactaacaaaaaaaacctatttttt
ttttcctgaaaatggagctcggctgtttaatgtaacatcttgagccctta
ggacttctccagttaggttaatccagtgtccggtctacttctccctttgg
ctatggagaacaaaaaatggaaaacaacatcttcaaggtcataaagccaa
agactgtgaatctaaagatccaaatgagccgccaactgcaaatcggtacg
aagcaacctaaaccacagctgacatgcaagggcttggagtctgcattttt
cgttgacgctttgtattttgttcaaaattccaaattttaaggaaatgtca
tgatttcaactcacaaaaatcctacttgatgatttcgcctcaatgaaacg
ttaattgaatgtcatccccaaaaactgctatatagaacacctgtcagaga
ctcaaaaagggaaaccgccgcggatatgaaggaaaacctagaattttaca
attgtacgtgagtatacagaaaaaaaaaaaaagaaagaaagctaaaatga
aaggttcaagtaacggtaagagaaaaggagaggaaggactgaaaggaagc
cgagaagaacgatgggaggcagccgcacgctacaccgggctacaatcact
tactcgagctggcaatgagataccttcatctgcgaagatgagttcaggtt
tgaaatcgcgagtcatgtttgagggcgacgccgagtccaagatcaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_83130661_83131727
seq2: B6Ng01-119P20.g_69_1115

seq1  GAATTCATTATTTTTAAGTAATACCTTTCAAAGATTAAATTAGTTACGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTATTTTTAAGTAATACCTTTCAAAGATTAAATTAGTTACGTG  50

seq1  CATAAAAAAAATAGCCAGGCAGTGGTAGTGTACGCCTTTAGTCCCAGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAAAAAATAGCCAGGCAGTGGTAGTGTACGCCTTTAGTCCCAGCAC  100

seq1  TCCAGAAGCAGAGGCAGGTAGATCTCCGAGTTTGAAGCCAGCCTGGTCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAAGCAGAGGCAGGTAGATCTCCGAGTTTGAAGCCAGCCTGGTCTA  150

seq1  CGAGTGAGTTCCAGAACAATCAGCGCTACACAGAGAAACTGTCTTGAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTGAGTTCCAGAACAATCAGCGCTACACAGAGAAACTGTCTTGAAAA  200

seq1  TGAAAATAAAAAATAGGTTGTATGAAAAAATAATTACAATTTTAGAACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATAAAAAATAGGTTGTATGAAAAAATAATTACAATTTTAGAACAT  250

seq1  GAGTCTATTTTTGAGTTTATCTAATAACCTTCTTTAAGTCTTATCTATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTATTTTTGAGTTTATCTAATAACCTTCTTTAAGTCTTATCTATAG  300

seq1  TATTCTGAACCTTGACACCATTATAAACTAACAAAAAAAACCTATTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGAACCTTGACACCATTATAAACTAACAAAAAAAACCTATTTTTT  350

seq1  TTTTCCTGAAAATGGAGCTCGGCTGTTTAATGTAACATCTTGAGCCCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTGAAAATGGAGCTCGGCTGTTTAATGTAACATCTTGAGCCCTTA  400

seq1  GGACTTCTCCAGTTAGGTTAATCCAGTGTCCGGTCTACTTCTCCCTTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTCTCCAGTTAGGTTAATCCAGTGTCCGGTCTACTTCTCCCTTTGG  450

seq1  CTATGGAGAACAAAAAATGGAAAACAACATCTTCAAGGTCATAAAGCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGAGAACAAAAAATGGAAAACAACATCTTCAAGGTCATAAAGCCAA  500

seq1  AGACTGTGAATCTAAAGATCCAAATGAGCCGCCAACTGCAAATCGGTACG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTGAATCTAAAGATCCAAATGAGCCGCCAACTGCAAATCGGTACG  550

seq1  AAGCAACCTAAACCACAGCTGACATGCAAGGGCTTGGAGTCTGCATTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAACCTAAACCACAGCTGACATGCAAGGGCTTGGAGTCTGCATTTTT  600

seq1  CGTTGACGCTTTGTATTTTGTTCAAAATTCCAAATTTTAAGGAAATGTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGACGCTTTGTATTTTGTTCAAAATTCCAAATTTTAAGGAAATGTCA  650

seq1  TGATTTCAACTCACAAAAATCCTACTTGATGATTTCGCCTCAATGAAACG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCAACTCACAAAAATCCTACTTGATGATTTCGCCTCAATGAAACG  700

seq1  TTAATTGAATGTCATCCCCAAAAACTGCTATATAGAACACCTGTCAGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTGAATGTCATCCCCAAAAACTGCTATATAGAACACCTGTCAGAGA  750

seq1  CTCAAAAAGGGAAACCGCCGCGGATATGAAGGAAAACCTAGAATTTTACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAAAGGGAAACCGCCGCGGATATGAAGGAAAACCTAGAATTTTACA  800

seq1  ATTGTACGTGAGTATACAGAAAAAAAAAAAAAGAAAGAAAGCTAAAATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTACGTGAGTATACAGAAAAAAAAAAAAAGAAAGAAAGCTAAAATGA  850

seq1  AAGGTTCCAAGTAACGGTAAAGAGAAAAGGAGAGGAAGGACTGAAAGGAA  900
      |||||| ||||||||||| |||||||||||||||||||||||||||||||
seq2  AAGGTT-CAAGTAACGGT-AAGAGAAAAGGAGAGGAAGGACTGAAAGGAA  898

seq1  GCCGAGAAGAAACGATGGGAGGCAGGCCGCACCGCTACACCGGGGCTACA  950
      ||||||||| |||||||||||||| |||||| ||||||||| ||||||| 
seq2  GCCGAGAAG-AACGATGGGAGGCA-GCCGCA-CGCTACACC-GGGCTAC-  943

seq1  AATCACTTACTCGAGCTGGCCAATGAGGATAACCTTTCATCTTGGCGAAG  1000
      ||||||||||||||||||| |||||| ||||  | |||||||  ||||||
seq2  AATCACTTACTCGAGCTGG-CAATGA-GATA--CCTTCATCT--GCGAAG  987

seq1  ATGAGGTCTCCAGGTTTGAAATCGCGAGTCATGTTTGAGGGGCGACGCCG  1050
      |||||   | |||||||||||||||||||||||||||| |||||||||| 
seq2  ATGAG---TTCAGGTTTGAAATCGCGAGTCATGTTTGA-GGGCGACGCC-  1032

seq1  GGAGTCCCAAGACCAGA  1067
       |||| |||||| ||||
seq2  -GAGT-CCAAGATCAGA  1047