BAC Information

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BAC

Clone NameB6Ng01-120B20
Chromosome4 (Build37)
Map Location 18,266,446 - 18,267,210
singlet/doubletsinglet
Overlap genenone
Upstream geneMmp16
Downstream geneLOC667251, LOC435772, Cngb3, LOC623122
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120B20.bB6Ng01-120B20.g
ACCDH924143DH924144
length9751,159
definitionDH924143|Mus musculus domesticus DNA, BAC clone: B6Ng01-120B20, 5' end.DH924144|Mus musculus domesticus DNA, BAC clone: B6Ng01-120B20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccatgccatccaaggacatgagttacacctgagcacagcctgac
acccaaggctgtcaaggaggatctatgttccagagataagatgcagagtg
cccgctgcctggcgcctgacttcggcccccatgtcagcagatgcccactt
ctttattctttgtaaaatttcccctcaacccctcccctattccccgcgat
gtatgctttaaaaagaaggcacctcagcataataaacgagaccttgatag
gaacccttcttggtctcctgcctctccttcccttcctcccatttccttcc
aggtttgcggtccccctcgcacccacgaatcccgcgggacgggataactt
tcaattaaaagttattaaagagatagggaaggacacttcatactcatcaa
cggaaaaatccactaacatgaactctcaattctgaacatctatgccacaa
atacaagggcacccacattaaaaaaaagataaaaaagttactaaagctca
agacacatactgaacctcacacactaatatagggaaacttcatttggctc
ccagttaagggatggggccacccacttatctcaaaaattttgatccagaa
ttgttcctttctaaaggaaatatagggacaaaaaatggtgcaaagactga
agggcaggccatccagagaccacctaacttgggttccattccatgcacag
gcaccaaacactacactattgctgctgccatgttgtgcatggcatggctg
tcctctggttgtttttaacagcagctaactgaaacatatgcagataatta
cagccaaacattggactgagcctggggaatgctagatatgagttagggga
aggactgaagaattgcagccccatatgaaaaacagtagtattaactaact
ggacccctcagagcttccaggaactgagaaggtccatgggccccactatg
taggtttatgggtggtccactctgc
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatctttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggattgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaaggagctacagagacaaagtttggagctgagatg
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcatccaaacgctgacaccattgcatacactagcaagattttattgaa
aggacccagatgtagctgtctcttgtgagactatgcccggggcctagcaa
acacagaagtggatgctcacagtcagctaatggatgatcatagggctccc
atggagagctagagaaagtagccagagctaaaggatctgcaccctatagt
ggaacacatatgaactaaccagtacccggagctctgactctagctgcaat
atatcaaagatgcctagtcgcatcctgaaaagaaagcccattgaacttgc
actttatgtccagtcaggaaactcactggtaaaaggggagtgcctgcaag
gaagtgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_18266446_18267210
seq2: B6Ng01-120B20.b_44_808 (reverse)

seq1  AAAACAACCAGAGGACAGCCATGCCATGCACAACATGGCAGCAGCAATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAACCAGAGGACAGCCATGCCATGCACAACATGGCAGCAGCAATAG  50

seq1  TGTAGTGTTTGGTGCCTGTGCATGGAATGGAACCCAAGTTAGGTGGTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTGTTTGGTGCCTGTGCATGGAATGGAACCCAAGTTAGGTGGTCTC  100

seq1  TGGATGGCCTGCCCTTCAGTCTTTGCACCATTTTTTGTCCCTATATTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGGCCTGCCCTTCAGTCTTTGCACCATTTTTTGTCCCTATATTTCC  150

seq1  TTTAGAAAGGAACAATTCTGGATCAAAATTTTTGAGATAAGTGGGTGGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAAAGGAACAATTCTGGATCAAAATTTTTGAGATAAGTGGGTGGCC  200

seq1  CCATCCCTTAACTGGGAGCCAAATGAAGTTTCCCTATATTAGTGTGTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCCTTAACTGGGAGCCAAATGAAGTTTCCCTATATTAGTGTGTGAG  250

seq1  GTTCAGTATGTGTCTTGAGCTTTAGTAACTTTTTTATCTTTTTTTTAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGTATGTGTCTTGAGCTTTAGTAACTTTTTTATCTTTTTTTTAATG  300

seq1  TGGGTGCCCTTGTATTTGTGGCATAGATGTTCAGAATTGAGAGTTCATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGCCCTTGTATTTGTGGCATAGATGTTCAGAATTGAGAGTTCATGT  350

seq1  TAGTGGATTTTTCCGTTGATGAGTATGAAGTGTCCTTCCCTATCTCTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGATTTTTCCGTTGATGAGTATGAAGTGTCCTTCCCTATCTCTTTA  400

seq1  ATAACTTTTAATTGAAAGTTATCCCGTCCCGCGGGATTCGTGGGTGCGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTTTTAATTGAAAGTTATCCCGTCCCGCGGGATTCGTGGGTGCGAG  450

seq1  GGGGACCGCAAACCTGGAAGGAAATGGGAGGAAGGGAAGGAGAGGCAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACCGCAAACCTGGAAGGAAATGGGAGGAAGGGAAGGAGAGGCAGGA  500

seq1  GACCAAGAAGGGTTCCTATCAAGGTCTCGTTTATTATGCTGAGGTGCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAGAAGGGTTCCTATCAAGGTCTCGTTTATTATGCTGAGGTGCCTT  550

seq1  CTTTTTAAAGCATACATCGCGGGGAATAGGGGAGGGGTTGAGGGGAAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAAAGCATACATCGCGGGGAATAGGGGAGGGGTTGAGGGGAAATT  600

seq1  TTACAAAGAATAAAGAAGTGGGCATCTGCTGACATGGGGGCCGAAGTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAAGAATAAAGAAGTGGGCATCTGCTGACATGGGGGCCGAAGTCAG  650

seq1  GCGCCAGGCAGCGGGCACTCTGCATCTTATCTCTGGAACATAGATCCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCAGGCAGCGGGCACTCTGCATCTTATCTCTGGAACATAGATCCTCC  700

seq1  TTGACAGCCTTGGGTGTCAGGCTGTGCTCAGGTGTAACTCATGTCCTTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAGCCTTGGGTGTCAGGCTGTGCTCAGGTGTAACTCATGTCCTTGG  750

seq1  ATGGCATGGGAATTC  765
      |||||||||||||||
seq2  ATGGCATGGGAATTC  765