BAC Information

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BAC

Clone NameB6Ng01-120C02
Chromosome4 (Build37)
Map Location 18,664,863 - 18,666,109
singlet/doubletsinglet
Overlap genenone
Upstream geneMmp16
Downstream geneLOC667251, LOC435772, Cngb3, LOC623122, Cpne3, LOC100040306, 2410005O16Rik, Wwp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120C02.bB6Ng01-120C02.g
ACCDH924155DH924156
length1,2301,230
definitionDH924155|Mus musculus domesticus DNA, BAC clone: B6Ng01-120C02, 5' end.DH924156|Mus musculus domesticus DNA, BAC clone: B6Ng01-120C02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccactgtgaaataaaatatattttgagaccaaacactctatagtt
aataaattccagtttaaaaagttatcaagggctggagagatggctcagcc
gttaaaggctaggctcacaaccaaaaaaaaaaataaataaataaataaaa
taaaaaataaaaagttatcaagatgcctgaagctggtaatgtatttttaa
cctctctatagctaaagagaaaattgatggactgtgagcacttggaaggc
aatctgcatttaaaatatgtgaactgcaagactatcatttgtcataaagt
tgtcttatctaaaggataaaggacttaaagcctcaaagtttctatttcac
aggaactataaataggaaaaataggatatgttaaataatagatggttccc
cattcttggccatttcaatggtgaaattgatagaatccattctatcaaaa
gccaaaagttcagttatgtgacattgtaacactgaggtataacatttaaa
gtaggttttaaaattaatcttaagaaaattagaatttctttaaaaatcat
tattacaatagagtttctcaacctttaatgtgcatcagaataatttactg
tatattttcacattttagaatgtgtatgtatgtgtgtgtgcttatttcga
ctttttggctatgttgttcgcattcactctttagaacatgtctgtaaaca
tatacacatatttctagttttagactttaatgattgcatgcttgcatatg
tttgtataggtattcctaaatatgcatgtatctatggagggccaaccgtg
atatcagattacttcctctatttttccccactttgtttttttgagacaat
ctcttactgaacatggaacttgggattttggctagactgtctggccataa
ataaattaagatcatcctgtctctatcttcctttagtagggttaaagatg
ttggcctagcctttacaccagagcggatgtaaatttaaatgtcactttta
ttgctcagatgagtgatgagatgagagctatacggaactatataaataca
tggcttgggttgttcccagaacatttctattgtacttatcctgcagtctg
gagcttcttagctactctatacaataatcttctgcagcttgatgaagctt
cagctttcacctcacttgtacttaagccttgaatgtttcagcctagagat
tcaatggtctcaattatactcacgcttcta
gaattcagaggcagtctttccaagtagagtaagacaagagaagtcaattt
gaatggcaaggactttgagccagaacagctgagttgaaccagttatacag
agttcagaaagagatagaaatattgagtttccttagcattaagtctcaga
ggctaaaataaaacctgctaggcctaggttagtagattgaggttggaatc
taaagccttcatggctggggggtccagaagactagattgtatggaggcaa
gaatctttctggcttaggctgaggctctgagctcagcccaaaccatgtat
ttttaaatatttggtatgcctcccatctcatcttttcatgtgaggaaata
aaagcaatattttcatttccacatattaaatttattgtttcttttattta
ttcaatttttgtaaagaattttattgaaattttgatggggatgaaacttt
agattgcttttggtagtatggtcattttcacaattttgatcctaccaatc
agtgaacatggtagatctcttcgtcttctgatattttctatatcttttta
cagttttgtacggttttcaatgtactttacttccttagatttattcatga
tttttaaaagactatatttaatgctattatttatttccttgtgggtgtgt
atgtcatttctaggatgtttactcttttgatgagagtatttataagctgt
aagatttttcttatgggctcttaagaatatatatatatatatatatatag
tgtctaaaatcacatctccaaagaacaaccctttgctatttctatccagt
ttatatctctcatttgtcttattgttgtagctaaaatggtgagtactatt
ttgaacaagagtggacagactggatatctttgcagtctttctgattttgt
ggaaatactatgagaatttctctagttaggaggatagatgatcttagctc
tggatatatgtatatttgcctttattatgtagggaaagtcttcaggatca
ttcatgatgaatgtggattttattagaagatcattttgcatgcagaaagg
atcatgtgcttcctgtcttagagtaatttcttcaaatgcattgctgaatc
attatgtaacctgggaagtgagctatgagtagagctacttggtgtggggg
aaactctctgaagtccgaatccaatctagtatatggcagtttgtgaatcg
tccctaacaaagagtataaattttacttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_18664863_18666109
seq2: B6Ng01-120C02.b_48_1277

seq1  GAATTCCACTGTGAAATAAAATATATTTTGAGACCAAACACTCTATAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTGTGAAATAAAATATATTTTGAGACCAAACACTCTATAGTT  50

seq1  AATAAATTCCAGTTTAAAAAGTTATCAAGGGCTGGAGAGATGGCTCAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATTCCAGTTTAAAAAGTTATCAAGGGCTGGAGAGATGGCTCAGCC  100

seq1  GTTAAAGGCTAGGCTCACAACCAAAAAAAAAAATAAATAAATAAATAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAGGCTAGGCTCACAACCAAAAAAAAAAATAAATAAATAAATAAAA  150

seq1  TAAAAAATAAAAAGTTATCAAGATGCCTGAAGCTGGTAATGTATTTTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATAAAAAGTTATCAAGATGCCTGAAGCTGGTAATGTATTTTTAA  200

seq1  CCTCTCTATAGCTAAAGAGAAAATTGATGGACTGTGAGCACTTGGAAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTATAGCTAAAGAGAAAATTGATGGACTGTGAGCACTTGGAAGGC  250

seq1  AATCTGCATTTAAAATATGTGAACTGCAAGACTATCATTTGTCATAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGCATTTAAAATATGTGAACTGCAAGACTATCATTTGTCATAAAGT  300

seq1  TGTCTTATCTAAAGGATAAAGGACTTAAAGCCTCAAAGTTTCTATTTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTATCTAAAGGATAAAGGACTTAAAGCCTCAAAGTTTCTATTTCAC  350

seq1  AGGAACTATAAATAGGAAAAATAGGATATGTTAAATAATAGATGGTTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACTATAAATAGGAAAAATAGGATATGTTAAATAATAGATGGTTCCC  400

seq1  CATTCTTGGCCATTTCAATGGTGAAATTGATAGAATCCATTCTATCAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTGGCCATTTCAATGGTGAAATTGATAGAATCCATTCTATCAAAA  450

seq1  GCCAAAAGTTCAGTTATGTGACATTGTAACACTGAGGTATAACATTTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAAGTTCAGTTATGTGACATTGTAACACTGAGGTATAACATTTAAA  500

seq1  GTAGGTTTTAAAATTAATCTTAAGAAAATTAGAATTTCTTTAAAAATCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTTTTAAAATTAATCTTAAGAAAATTAGAATTTCTTTAAAAATCAT  550

seq1  TATTACAATAGAGTTTCTCAACCTTTAATGTGCATCAGAATAATTTACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACAATAGAGTTTCTCAACCTTTAATGTGCATCAGAATAATTTACTG  600

seq1  TATATTTTCACATTTTAGAATGTGTATGTATGTGTGTGTGCTTATTTCGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTCACATTTTAGAATGTGTATGTATGTGTGTGTGCTTATTTCGA  650

seq1  CTTTTTGGCTATGTTGTTCGCATTCACTCTTTAGAACATGTCTGTAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGGCTATGTTGTTCGCATTCACTCTTTAGAACATGTCTGTAAACA  700

seq1  TATACACATATTTCTAGTTTTAGACTTTAATGATTGCATGCTTGCATATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACACATATTTCTAGTTTTAGACTTTAATGATTGCATGCTTGCATATG  750

seq1  TTTGTATAGGTATTCCTAAATATGCATGTATCTATGGAGGGCCAACCGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATAGGTATTCCTAAATATGCATGTATCTATGGAGGGCCAACCGTG  800

seq1  ATATCAGATTACTTCCTCTATTTTTCCCCACTTTGTTTTTTTGAGACAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAGATTACTTCCTCTATTTTTCCCCACTTTGTTTTTTTGAGACAAT  850

seq1  CTCTTACTGAACATGGAACTTGGGATTTTGGCTAGACTGTCTGGCCATAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTACTGAACATGGAACTTGGGATTTTGGCTAGACTGTCTGGCCATAA  900

seq1  ATAAATTAAGATCATCCTGTCTCTATCTTCCTTTAGTAGGGTTAAAGATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTAAGATCATCCTGTCTCTATCTTCCTTTAGTAGGGTTAAAGATG  950

seq1  TTGGCCTAGCCTTTTACACCAGAGCGGATGTAAATTTAAATGTCACTTTT  1000
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCTAGCC-TTTACACCAGAGCGGATGTAAATTTAAATGTCACTTTT  999

seq1  ATTGCCTCAGATGAAGTGATGAGATGAGAGCTATACCGAAACTATATAAA  1050
      |||| |||||||| ||||||||||||||||||||| || |||||||||||
seq2  ATTG-CTCAGATG-AGTGATGAGATGAGAGCTATA-CGGAACTATATAAA  1046

seq1  TACATGGCTTGGGTTGTTCCCAGAACATTTCTATGTAACTAATCCTTGGC  1100
      ||||||||||||||||||||||||||||||||||   ||| |||||  ||
seq2  TACATGGCTTGGGTTGTTCCCAGAACATTTCTATTGTACTTATCCT--GC  1094

seq1  AAGGTCTGGAAGCTTC-TAGCTACTCTATACAATAATCTTCTGCAAGCCT  1149
      |  |||||| |||||| ||||||||||||||||||||||||||| ||| |
seq2  A--GTCTGG-AGCTTCTTAGCTACTCTATACAATAATCTTCTGC-AGCTT  1140

seq1  GGAATTTGAAGGCTTCAGCTTCTACCCTCCATCTGATAACCTAGGGCTAG  1199
      |     |||| ||||||||||  |||   | | |    || || | || |
seq2  G----ATGAA-GCTTCAGCTTTCACCTCACTTGT----ACTTAAGCCTTG  1181

seq1  AATGTTTCAGCCTCAAAGATTCATTG--CTCAA-TATACTCACACCTTCT  1246
      ||||||||||||| | ||||||| ||  ||||| |||||||||  |||||
seq2  AATGTTTCAGCCT-AGAGATTCAATGGTCTCAATTATACTCAC-GCTTCT  1229

seq1  A  1247
      |
seq2  A  1230