BAC Information

Click to search

BAC

Clone NameB6Ng01-120P02
Chromosome4 (Build37)
Map Location 24,350,419 - 24,351,424
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC625462, LOC383998, LOC100040464, LOC623873, LOC664973
Downstream geneF730047E07Rik, Klhl32, 1110007M04Rik, C230012O17Rik, Gpr63, Fhl5, 1810074P20Rik, Prdx6-rs2, LOC665019
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120P02.bB6Ng01-120P02.g
ACCDH924753DH924754
length1,0061,179
definitionDH924753|Mus musculus domesticus DNA, BAC clone: B6Ng01-120P02, 5' end.DH924754|Mus musculus domesticus DNA, BAC clone: B6Ng01-120P02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttgcgtgtgaaaagaaaatgtgtgcttgctctctcctaagaa
ttactgggctgagatctcagaatgctgattcatagaataatcaaaggaaa
cctgaagtgagtgggttggtatgtaaaataaaagactaggcttctgatct
gcataagatgagctatccagagaattttttcgaatagcaagagtgtactg
cttggagaactatctcgagaagaacatagagagaactttctagagatctc
tagagaaaccagatcagaaagaaagaaagcagaacagagagaaagcaagc
aggaaagctgtttcgagtgaagtatagaccaccagcttccacccacaaat
tgacttggagtcactcccagagatacttttcccaaaatccctctctaagc
caaggctggcccttggcatggtggtggtgggaagagtttggagcagtact
ccttctagaggaacaagttggccaggagtgagtgagtgaatttgtttccc
attcttgggtaccacagagatgttagtgggctgggctactttctaatgga
tgctggctaacctgagttcttccaggctgaagatcctgtgtgcttagact
ttggtgtggtatctcacagaagggcatctacaatatgggtctgatgggac
tggatacttggccaggcacaatgtggcacacttttgcatgctgagccatg
agtctatggatattacatgctagctggttataccaagagtccactctctg
cttatggttcctatggaagtagaactttaagatcgtgccattctagctgg
gcaccgtgactgtctcctgtgcagaatggccaaactggaaaggacccagt
gccccaaagtatcttggagttgtctatttgtgttttgtttgtctgcctgt
ctctccctcatctatgtatgtatctatggatgatgtatgtggtgcactat
catttttatgtatatatgcatgtacctattttgtatggtatgtatgtagt
atgtat
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactatggaaatcagtctggcggttcctca
gaaaactggatatagtactaccgaaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaacaatgaatttatgaaattcctagccaa
atggatcgacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccagaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaataaagactgaagtgtgaacactatgcccctccttagaagagggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagataa
aaggatggaccatgtagacactagcatatcccggggatccatcccataat
cagcttccaaatgctgacaccattgcatacactagaaagattatgctgaa
aggaccctgatatagctgtctcttgtcagagtaatgcctgggcctagcaa
acatagaagttgatgctcacagtcggcttttggatggatcacatggcccc
aatgaaggagctagagaaagtaccaaagagctaaaggatctgcaacccta
tagtggacacattatgacttacagtacccggagctcttgactctagctgc
atatgcatcaaaagattgcctagtcgcatcacttgtaaagagagccattt
gaaccgcaactttatatgcccagtaccgggtaacgccaagtccaataagg
gaatgtgtgtggtataatgagcagtaact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_24350419_24351424
seq2: B6Ng01-120P02.b_47_1052 (reverse)

seq1  ATACATACATACATACATA-CATACATAATAGGTACATACATATATACAT  49
      |||||||| |||||||||| |||||| ||||||||||| |||||||||||
seq2  ATACATAC-TACATACATACCATACAAAATAGGTACATGCATATATACAT  49

seq1  AAAAATGATAAGTGCA-CACATACATCATTCATAGATACATACATAGATG  98
      ||||||||| |||||| |||||||||||| ||||||||||||||||||||
seq2  AAAAATGAT-AGTGCACCACATACATCATCCATAGATACATACATAGATG  98

seq1  AGGGAGAGACAGGCAGACAAACAAAACACAAATAGACAACTCCAAGATAC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGAGACAGGCAGACAAACAAAACACAAATAGACAACTCCAAGATAC  148

seq1  TTTGGGGCACTGGGTCCTTTCCAGTTTGGCCATTCTGCACAGGAGACAGT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGGCACTGGGTCCTTTCCAGTTTGGCCATTCTGCACAGGAGACAGT  198

seq1  CACGGTGCCCAGCTAGAATGGCACGATCTTAAAGTTCTACTTCCATAGGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGTGCCCAGCTAGAATGGCACGATCTTAAAGTTCTACTTCCATAGGA  248

seq1  ACCATAAGCAGAGAGTGGACTCTTGGTATAACCAGCTAGCATGTAATATC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATAAGCAGAGAGTGGACTCTTGGTATAACCAGCTAGCATGTAATATC  298

seq1  CATAGACTCATGGCTCAGCATGCAAAAGTGTGCCACATTGTGCCTGGCCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGACTCATGGCTCAGCATGCAAAAGTGTGCCACATTGTGCCTGGCCA  348

seq1  AGTATCCAGTCCCATCAGACCCATATTGTAGATGCCCTTCTGTGAGATAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCCAGTCCCATCAGACCCATATTGTAGATGCCCTTCTGTGAGATAC  398

seq1  CACACCAAAGTCTAAGCACACAGGATCTTCAGCCTGGAAGAACTCAGGTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCAAAGTCTAAGCACACAGGATCTTCAGCCTGGAAGAACTCAGGTT  448

seq1  AGCCAGCATCCATTAGAAAGTAGCCCAGCCCACTAACATCTCTGTGGTAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGCATCCATTAGAAAGTAGCCCAGCCCACTAACATCTCTGTGGTAC  498

seq1  CCAAGAATGGGAAACAAATTCACTCACTCACTCCTGGCCAACTTGTTCCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAATGGGAAACAAATTCACTCACTCACTCCTGGCCAACTTGTTCCT  548

seq1  CTAGAAGGAGTACTGCTCCAAACTCTTCCCACCACCACCATGCCAAGGGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAGGAGTACTGCTCCAAACTCTTCCCACCACCACCATGCCAAGGGC  598

seq1  CAGCCTTGGCTTAGAGAGGGATTTTGGGAAAAGTATCTCTGGGAGTGACT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTGGCTTAGAGAGGGATTTTGGGAAAAGTATCTCTGGGAGTGACT  648

seq1  CCAAGTCAATTTGTGGGTGGAAGCTGGTGGTCTATACTTCACTCGAAACA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTCAATTTGTGGGTGGAAGCTGGTGGTCTATACTTCACTCGAAACA  698

seq1  GCTTTCCTGCTTGCTTTCTCTCTGTTCTGCTTTCTTTCTTTCTGATCTGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCCTGCTTGCTTTCTCTCTGTTCTGCTTTCTTTCTTTCTGATCTGG  748

seq1  TTTCTCTAGAGATCTCTAGAAAGTTCTCTCTATGTTCTTCTCGAGATAGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTAGAGATCTCTAGAAAGTTCTCTCTATGTTCTTCTCGAGATAGT  798

seq1  TCTCCAAGCAGTACACTCTTGCTATTCGAAAAAATTCTCTGGATAGCTCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAAGCAGTACACTCTTGCTATTCGAAAAAATTCTCTGGATAGCTCA  848

seq1  TCTTATGCAGATCAGAAGCCTAGTCTTTTATTTTACATACCAACCCACTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATGCAGATCAGAAGCCTAGTCTTTTATTTTACATACCAACCCACTC  898

seq1  ACTTCAGGTTTCCTTTGATTATTCTATGAATCAGCATTCTGAGATCTCAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGGTTTCCTTTGATTATTCTATGAATCAGCATTCTGAGATCTCAG  948

seq1  CCCAGTAATTCTTAGGAGAGAGCAAGCACACATTTTCTTTTCACACGCAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTAATTCTTAGGAGAGAGCAAGCACACATTTTCTTTTCACACGCAA  998

seq1  AAGAATTC  1006
      ||||||||
seq2  AAGAATTC  1006