BAC Information

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BAC

Clone NameB6Ng01-121B16
Chromosome4 (Build37)
Map Location 146,433,701 - 146,627,434
singlet/doubletdoublet
Overlap geneLOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546
Upstream geneLOC384084, LOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498
Downstream geneLOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121B16.bB6Ng01-121B16.g
ACCDH924872DH924873
length1,1801,113
definitionDH924872|Mus musculus domesticus DNA, BAC clone: B6Ng01-121B16, 5' end.DH924873|Mus musculus domesticus DNA, BAC clone: B6Ng01-121B16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(146,626,267 - 146,627,434)(146,433,701 - 146,434,534)
sequence
gaattcttcttgaaatttcacatcaaggtctgaatgattcagagatgaaa
taaatacaacaccattacagacaatggtaaacaacatttatatatataaa
cattaaaagcaaaatgataccaggaatcttgacaatgtgcagtcatgaaa
gtaagtaatgatatatttagactgtaagtgtaacctagttcctcccacca
ccctagattctcaaagtttattcacaacacctcatatggaaatccctgtc
acctgacctaaatgacacacagcaaaagaaaattgagaggctgtagctaa
agcaatttgaaaatgttaataaaatttccctaccccaaatcactaatgca
ataccaattctcatgacaaaatgaattatgaaacaaactcaaaatataat
atgaacaccattcaatgtggacaaatgtcataaagagggaacaagcacag
gaattcaaagaaggcagaaacaaacttaatgaaattccagagaattcctt
caagtgggtaagagaataattatacatgtgcaggatgtgaacatcttatc
cagagatataaaaatctaaggaatgctcactctgaaataaactgtaagcc
tggtggtaactcaatggccaatatgtgaagatacaccattcaaacaaaca
aacaaacaaacaaaaaatcagctcgtcaatgaaaggtctttcatcctagc
tgtcagggatgtaacctaaaagccattctggtctctatataaggacatgt
gaaagttagaaatagagtgtgggaccctgttttacaaacaaacaaacaca
caaacaaacaaacaggaaacccatacaaaaaattagagctttgtcttcta
cattgatatcaaaatcaattttaaaagtacaaggatattagaaaggctga
ttctcctattggataatacttttatcttttaaagttgggtcctcagtggg
tcacaatcgtttgaggaatttagctgtggacattactgaattaagtatga
cactgggggtggctatgagaaaaagaatagatagatccaagccatctatt
ctttctctctttagtgactggggtgaagaatgtgatctttcactttctac
ttcacaacatggcatttctatctgtcctccctgtcatggttgatgcctat
ccttgaagccaatacccaaaagtagccttt
gaattcatcagagaattcatacaggagagaaaccttacaaatgtagtgaa
tgtgacaaatgctttactaaaaaatccagtttgaggattcatcagagatt
tcatacaggagagaaaccttacaaatgtagtgaatgtgacaaatgtttta
ttcaaaaatgcagtctgataattcatcagagaattcatacaggagagaaa
ccttacaaatgtagtgaatgtgacaaagctttactgagaaagtcaatctg
agaaggcatcagagaactcatacaggggagaattcttacaaatgtattga
atgtgacaaatgttttgcccagaaatcctatcttgtttttaatcacagaa
atcatacattaaagaagccttacaaatgcagtcaatgtgacaaatgattt
tcccacaaacttagtctgagaatgcatcagagaattcatacagtagagaa
aacttacaaaaatgcagtgaatgtgataaatgctttactaataaaggcag
actgagaattaatcagataatttatacatttaaaaaaacccttacaagta
ttttgtatgtgataaatgcagtacccacaacatcagtctgacaaatcaac
agatatttcaaacagtagagcaacattataaatgaaatgaatgagatagt
cctttaacaagaaatatcatcttaaaattcactggagaattcttccaaaa
gggaaacatttcaaatacattgacggtttgaatcctttattttggcctat
ctcttagaatgtaatagataatttatacaggcagaatcttaacaaatata
atatatgctgaaatatctttgacttcatttcagtgcagaaaaaatatgta
aaaaattttttttatgggaaaatagttctgaggaaatgtggcatatgttt
tacacgggtaatattcttttcaacagtcagtgctctaaactagagatatt
atgaatctgaaaactttgaaaacttcatgcatgtcaaatctagatatgtc
actatatgctgcagtactctgaattatgatagtgaagaaacattcataac
ttttactgtccctcaaaattatatgatgagtcagggtgaaggcagaagaa
ttgatgttgtgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146626267_146627434
seq2: B6Ng01-121B16.b_47_1226 (reverse)

seq1  AAAGACTAC-TTTGGGTAATGCTTCCAGAGGATAGCCATCAACCATGACA  49
      |||| |||| |||||||| ||  | || ||||||| ||||||||||||||
seq2  AAAGGCTACTTTTGGGTATTGGCTTCA-AGGATAGGCATCAACCATGACA  49

seq1  GGGAGGACAGATAGAACATTGCCATGTTGTTGAAGTAGAAAGGTGAAAGA  99
      |||||||||||||||  | |||||||||| ||||||||||| ||||||||
seq2  GGGAGGACAGATAGA--AATGCCATGTTG-TGAAGTAGAAA-GTGAAAGA  95

seq1  TCACA-TCTTCAACCCCAGTCACTAAAGAGGAAGAAAGAATTAAGATGGC  148
      ||||| ||||| ||||||||||||||||||  |||||||||  |||||||
seq2  TCACATTCTTC-ACCCCAGTCACTAAAGAG--AGAAAGAAT--AGATGGC  140

seq1  TTGGATCTATCTATTCTTTCTTCTCATAGCCAACCCCCATGTCATACTTA  198
      ||||||||||||||||||| |||||||||||| ||||  |||||||||||
seq2  TTGGATCTATCTATTCTTT-TTCTCATAGCCACCCCCAGTGTCATACTTA  189

seq1  ATTCAGTAATGTTCCAACAGCTAAATTCCTCAAACGATTGTGACCCACTG  248
      ||||||||||||  | ||||||||||||||||||||||||||||||||||
seq2  ATTCAGTAATGT--CCACAGCTAAATTCCTCAAACGATTGTGACCCACTG  237

seq1  AGGACCCAACTTTAAAAGATAAAAGTATTATCCAATAGGAGAATCAGCC-  297
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGGACCCAACTTTAAAAGATAAAAGTATTATCCAATAGGAGAATCAGCCT  287

seq1  TTCTAATATCCTTGTACTTTTTAAATTGATTTTGATATCAATGTAGAAGA  347
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTCTAATATCCTTGTACTTTTAAAATTGATTTTGATATCAATGTAGAAGA  337

seq1  CAAAACTCTAATTTTTTGTATGGGTTTCC----------------TGTTT  381
      |||| ||||||||||||||||||||||||                |||||
seq2  CAAAGCTCTAATTTTTTGTATGGGTTTCCTGTTTGTTTGTTTGTGTGTTT  387

seq1  GTTTGTTTGTAAAACAGGGTCCCACACTCTATTTCTAACTTTCACATGTC  431
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTGTAAAACAGGGTCCCACACTCTATTTCTAACTTTCACATGTC  437

seq1  CTGATATAGAGACCAGAATGGCTTTTAGGTCACATCCCTGACAGCTAGGA  481
      || ||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTTATATAGAGACCAGAATGGCTTTTAGGTTACATCCCTGACAGCTAGGA  487

seq1  TGAAAGACCTTTCGTTGACGAGCTGATTT--------TTTGTTTGTTTGT  523
      ||||||||||||| |||||||||||||||        |||||||||||||
seq2  TGAAAGACCTTTCATTGACGAGCTGATTTTTTGTTTGTTTGTTTGTTTGT  537

seq1  TTGAATGGTGTATCTTCACATATTGGCCATTGAGTTACCACCAGGCTTAC  573
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATGGTGTATCTTCACATATTGGCCATTGAGTTACCACCAGGCTTAC  587

seq1  AGAATTTATTTCAGAGTGAGCATTCCTTAGATTTTTATATCTCTGGATAA  623
      ||  ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AG--TTTATTTCAGAGTGAGCATTCCTTAGATTTTTATATCTCTGGATAA  635

seq1  GATGTTCACATCCTGCACATGTATAATTATTCTCTTACCCACTTGTAGGA  673
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GATGTTCACATCCTGCACATGTATAATTATTCTCTTACCCACTTGAAGGA  685

seq1  ATTCTCTGGAATTTCATTAAGTTTGTTTCTGCCTTCTTTGAATTCCTGTG  723
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTGGAATTTCATTAAGTTTGTTTCTGCCTTCTTTGAATTCCTGTG  735

seq1  CTTGTTCCCTCTTTATGACATTTGTCCACATTGAATGGTGTTCATATTAT  773
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTCCCTCTTTATGACATTTGTCCACATTGAATGGTGTTCATATTAT  785

seq1  ATTTTGAGTTTGTTTCATAATTCATTTTGTCATGAGAATTGGTATTGCAT  823
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGAGTTTGTTTCATAATTCATTTTGTCATGAGAATTGGTATTGCAT  835

seq1  TAGTGATTTGGGGTAGGGAAATTTTATTAACATTTTCAAATTGCTTTAGC  873
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGATTTGGGGTAGGGAAATTTTATTAACATTTTCAAATTGCTTTAGC  885

seq1  TACAGCCTCTCAATTTTCTTTTGCTGTGTGTCATTTAGGTCAGGTGACAG  923
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCCTCTCAATTTTCTTTTGCTGTGTGTCATTTAGGTCAGGTGACAG  935

seq1  GGATTTCCATATGAGGTGTTGTGAAATAACTTTGAGAATCTAGGGTGGTG  973
      |||||||||||||||||||||||||  |||||||||||||||||||||||
seq2  GGATTTCCATATGAGGTGTTGTGAATAAACTTTGAGAATCTAGGGTGGTG  985

seq1  GGAGGAACTAGGTTACACTTACAGTCTAAATATATCATTACTTACTTTCA  1023
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAACTAGGTTACACTTACAGTCTAAATATATCATTACTTACTTTCA  1035

seq1  TGACTGCACATTGTCAAGATTCCTGGTATCATTTTGCTTTTAATGTTTAT  1073
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGCACATTGTCAAGATTCCTGGTATCATTTTGCTTTTAATGTTTAT  1085

seq1  ATATATAAATGTTGTTTGCCATTGTCTGTAATGGTGTTGTATTTATTTCA  1123
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATATATAAATGTTGTTTACCATTGTCTGTAATGGTGTTGTATTTATTTCA  1135

seq1  TCTCTGAATCATTCAGACCTTGATGTGAAATTTCAAGAAGAATTC  1168
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGAATCATTCAGACCTTGATGTGAAATTTCAAGAAGAATTC  1180

seq1: chr4_146433701_146434534
seq2: B6Ng01-121B16.g_377_1180

seq1  ATGTTTTGCCCAGAAATCCTATCTTGTTTTTAATCACAGAAATCATACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTGCCCAGAAATCCTATCTTGTTTTTAATCACAGAAATCATACAT  50

seq1  TAAAGAAGCCTTACAAATGCAGTCAATGTGACAAATGATTTTCCCACAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAGCCTTACAAATGCAGTCAATGTGACAAATGATTTTCCCACAAA  100

seq1  CTTAGTCTGAGAATGCATCAGAGAATTCATACAGTAGAGAAAACTTACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTCTGAGAATGCATCAGAGAATTCATACAGTAGAGAAAACTTACAA  150

seq1  AAATGCAGTGAATGTGATAAATGCTTTACTAATAAAGGCAGACTGAGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAGTGAATGTGATAAATGCTTTACTAATAAAGGCAGACTGAGAAT  200

seq1  TAATCAGATAATTTATACATTTAAAAAAACCCTTACAAGTATTTTGTATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAGATAATTTATACATTTAAAAAAACCCTTACAAGTATTTTGTATG  250

seq1  TGATAAATGCAGTACCCACAACATCAGTCTGACAAATCAACAGATATTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAATGCAGTACCCACAACATCAGTCTGACAAATCAACAGATATTTC  300

seq1  AAACAGTAGAGCAACATTATAAATGAAATGAATGAGATAGTCCTTTAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTAGAGCAACATTATAAATGAAATGAATGAGATAGTCCTTTAACA  350

seq1  AGAAATATCATCTTAAAATTCACTGGAGAATTCTTCCAAAAGGGAAACTT  400
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AGAAATATCATCTTAAAATTCACTGGAGAATTCTTCCAAAAGGGAAACAT  400

seq1  TTCAAATACATTGACGGTTTGAATCCTTTATTTTGGCCTATCTCTTAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATACATTGACGGTTTGAATCCTTTATTTTGGCCTATCTCTTAGAA  450

seq1  TGTAATAGATAATTTATACAGGCAAGAATCTTAACAAATATAATATATGC  500
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGTAATAGATAATTTATACAGGC-AGAATCTTAACAAATATAATATATGC  499

seq1  TGAAATATCTTTGACTTCATTTCAGTGCAGAAAAAATATGTAAAAAA-AA  549
      |||||||||||||||||||||||||||||||||||||||||||||||   
seq2  TGAAATATCTTTGACTTCATTTCAGTGCAGAAAAAATATGTAAAAAATTT  549

seq1  TTTTTATGGGAAAAATAGTTCTCCTGGGGAAATGTGGCATATGTTTTACA  599
      |||||||||| |||||||||   ||| |||||||||||||||||||||||
seq2  TTTTTATGGG-AAAATAGTT---CTGAGGAAATGTGGCATATGTTTTACA  595

seq1  CGGGTAATATTCTTTTCAACAGTCAGTGCTCTAAACTAGAGAATTATTAT  649
      ||||||||||||||||||||||||||||||||||||||||||  ||||||
seq2  CGGGTAATATTCTTTTCAACAGTCAGTGCTCTAAACTAGAGA--TATTAT  643

seq1  GAATCTGAAAACTTTTGAAAACCTTCATGCAATGTTCAAATCTTAGATAA  699
      |||||||||||| |||||||| |||||||| ||| ||||||| ||||| |
seq2  GAATCTGAAAAC-TTTGAAAA-CTTCATGC-ATG-TCAAATC-TAGAT-A  687

seq1  TGTCAACTATTATGCTGGCAGTAACTCTGAATATATGATAGTGAAGAAAC  749
      |||| |||| |||||| ||||| ||||||||| |||||||||||||||||
seq2  TGTC-ACTA-TATGCT-GCAGT-ACTCTGAAT-TATGATAGTGAAGAAAC  732

seq1  ATTTTCATTAAACTTTTACTTGTTCACCCTCAAATATTATATGATGAAGT  799
      |  |||||  ||||||||| |||   |||||||| ||||||||||| |||
seq2  A--TTCAT--AACTTTTAC-TGT---CCCTCAAA-ATTATATGATG-AGT  772

seq1  CAGGTGTGAAAGCCAGAAGAATATGATGTTGTGCA  834
      |||| ||| ||| ||||||||| ||||||||||||
seq2  CAGG-GTG-AAGGCAGAAGAAT-TGATGTTGTGCA  804