BAC Information

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BAC

Clone NameB6Ng01-121C16
Chromosome4 (Build37)
Map Location 111,323,501 - 111,324,382
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040381, 2310026E23Rik
Downstream geneSpata6, LOC621612, Slc5a9, LOC639774, C130057D23Rik, LOC639781, 9530098N22Rik, A430090E18Rik, A030013N09Rik, LOC665949, LOC630887, OTTMUSG00000008540
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121C16.bB6Ng01-121C16.g
ACCDH924918DH924919
length1,149879
definitionDH924918|Mus musculus domesticus DNA, BAC clone: B6Ng01-121C16, 5' end.DH924919|Mus musculus domesticus DNA, BAC clone: B6Ng01-121C16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccatttttaatggggttatttgtttt
tctggagtccaccttcttgagttctttatatatattggatattagtctcc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggcctt
tttgtcttattgacagtgtcttttaccttacagaagctttgcaattttat
gaggtcccatttatcgattcttgttcttacagcacaagccattgctgttc
tattcaggaatttttcccctgtacccacatctttgaggcttttccctact
ttctcctctataagtttcagtgtagcagccttatttataatagccagaag
ctggaaagaacccagatgcccctaaacagaggaatggatacagaaaatgt
ggtacatttacataatggagtactactcagctattgaaaagaatgaattt
atgaaattcctagccaaatggatggacctggagggcatcatcctgagtga
ggcaacctaatcacaaaagaactcacacaatatgtactcactgataagtg
gatattatagcccagaaactaaggatacccaagatataagatacaatttg
ctaaacacatgaaactcaagaagaacgaagaccaaagtgtggacactttg
ccccttcttagaattgggaacaaaacacccttggaaggagttacagagac
aaagtttggagctgagatgaaaggatggaccaactagagactgccatatc
cggggatccatcccataatcagcttccaaatgctgacaccattgcatacc
ctagcaagattttatcgaaaggacccagatgtagctatctcttgtgagac
tatgccggggcctagcaaacacagaagtggatgctcacagtcagctattg
gatggatcacagggcccccaatggaggagctagagaaattacccaaggag
ctaaagggaactgcaccctataggtggacacatatgactaaccagtaccc
cctggagctcgtgtctctagctgcatgtgtatcagaagatgctagttggg
catcagcagaaaggagaagcccattggtcgtgcaactttatatgctcagt
acagggaacaccaggcatgaactggaatggggtggtgtggggggggaat
gaattcactgttttttactgtctatagaaaagaagtactctttaaaaaaa
agagtttgatttgtttttattttgtatatatgggttttcacatgcatgta
tgtcggcatgccaggtacatgcagtggcccacagaggctagaagagggca
tcatctcccctggaactggagttgcagacggttgtaagccatcatgtggt
tactagaattctaactgggatcttctggaagagaagccaacactgttaac
cactgaaccgtcttggcagtacaaaagattgaacactggcccttgctaca
tactaagcaagtggtccaccgttgggccccattctcagcccccctttccc
ctttgaaagttgtcttttgtccttcagaccttagcttccttccctgaagc
ctttcacagtttctccatttggaagtcagcctccccctacatggagagaa
ttttgtgcttggatttatggtcacactccagagaagaaacagtgcacaca
aactgagaagatcctggggtttgatgctacctccatcactttcaaagaat
gagagtcaataacatgaacactattattttattatctatgaaatacatag
agactcattctttggttttgctgggttgtagagaatgttggtgacagtaa
ctaaattgcacagagcacattctaaaaaagcagtagccatttttgtcaag
gcaaccatgtaaataaccaccttcttaataatagagttaactgaggtaca
tttcctcctctggactctaattcatcttcatctaaccccaatcccttata
cgtatctcagcagtctacccatcgagaacacccctaaaaacctttgaatc
aaagcatgaatagatgggatggatggatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_111323501_111324382
seq2: B6Ng01-121C16.g_66_944

seq1  GAATTCACTGTTTTTTACTGTCTATAGAAAAGAAGTACTCTTTAAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTTTTTTACTGTCTATAGAAAAGAAGTACTCTTTAAAAAAA  50

seq1  AGAGTTTGATTTGTTTTTATTTTGTATATATGGGTTTTCACATGCATGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTGATTTGTTTTTATTTTGTATATATGGGTTTTCACATGCATGTA  100

seq1  TGTCGGCATGCCAGGTACATGCAGTGGCCCACAGAGGCTAGAAGAGGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCGGCATGCCAGGTACATGCAGTGGCCCACAGAGGCTAGAAGAGGGCA  150

seq1  TCATCTCCCCTGGAACTGGAGTTGCAGACGGTTGTAAGCCATCATGTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTCCCCTGGAACTGGAGTTGCAGACGGTTGTAAGCCATCATGTGGT  200

seq1  TACTAGAATTCTAACTGGGATCTTCTGGAAGAGAAGCCAACACTGTTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGAATTCTAACTGGGATCTTCTGGAAGAGAAGCCAACACTGTTAAC  250

seq1  CACTGAACCGTCTTGGCAGTACAAAAGATTGAACACTGGCCCTTGCTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAACCGTCTTGGCAGTACAAAAGATTGAACACTGGCCCTTGCTACA  300

seq1  TACTAAGCAAGTGGTCCACCGTTGGGCCCCATTCTCAGCCCCCCTTTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAGCAAGTGGTCCACCGTTGGGCCCCATTCTCAGCCCCCCTTTCCC  350

seq1  CTTTGAAAGTTGTCTTTTGTCCTTCAGACCTTAGCTTCCTTCCCTGAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAAGTTGTCTTTTGTCCTTCAGACCTTAGCTTCCTTCCCTGAAGC  400

seq1  CTTTCACAGTTTCTCCATTTGGAAGTCAGCCTCCCCCTACATGGAGAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCACAGTTTCTCCATTTGGAAGTCAGCCTCCCCCTACATGGAGAGAA  450

seq1  TTTTGTGCTTGGATTTATGGTCACACTCCAGAGAAGAAACAGTGCACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTGCTTGGATTTATGGTCACACTCCAGAGAAGAAACAGTGCACACA  500

seq1  AACTGAGAAGATCCTGGGGTTTGATGCTACCTCCATCACTTTCAAAGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAGAAGATCCTGGGGTTTGATGCTACCTCCATCACTTTCAAAGAAT  550

seq1  GAGAGTCAATAACATGAACACTATTATTTTATTATCTATGAAATACATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTCAATAACATGAACACTATTATTTTATTATCTATGAAATACATAG  600

seq1  AGACTCATTCTTTGGTTTTGCTGGGTTGTAGAGAATGTTGGTGACAGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCATTCTTTGGTTTTGCTGGGTTGTAGAGAATGTTGGTGACAGTAA  650

seq1  CTAAATTGCACAGAGCACATTCTAAAAAAGCAGTAGCCATTTTTGTCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATTGCACAGAGCACATTCTAAAAAAGCAGTAGCCATTTTTGTCAAG  700

seq1  GCAACCATGTAAATAACCACCTTCTTAATAATAGAGTTAACTGAGGTACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCATGTAAATAACCACCTTCTTAATAATAGAGTTAACTGAGGTACA  750

seq1  TTTCCTCCTCTGGACTCTAATTCATCTTCATCTAACCCCAATCCCTTATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCCTCTGGACTCTAATTCATCTTCATCTAACCCCAATCCCTTATA  800

seq1  CGTATCTCAGCAGTCTACCCATCGAGAACACCCCTAAAAACCTTTGAATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATCTCAGCAGTCTACCCATCGAGAACACCCCTAAAAACCTTTGAATC  850

seq1  AAAGCATGAATAGATGGATGGATGGATGGATG  882
      ||||||||||||||||   |||||||||||||
seq2  AAAGCATGAATAGATG---GGATGGATGGATG  879