BAC Information

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BAC

Clone NameB6Ng01-121K14
Chromosome4 (Build37)
Map Location 15,314,228 - 15,414,012
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC433688, Slc26a7, 1700034K16Rik, Otud6b, LOC100040047, Tmem55a, OTTMUSG00000004551, Efcbp1, Tmem64
Downstream geneLOC100040095, LOC633695, Calb1, Decr1, Nbn, Osgin2, Ripk2, LOC667150, LOC383994
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121K14.bB6Ng01-121K14.g
ACCDH925290DH925291
length1,038135
definitionDH925290|Mus musculus domesticus DNA, BAC clone: B6Ng01-121K14, 5' end.DH925291|Mus musculus domesticus DNA, BAC clone: B6Ng01-121K14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,412,971 - 15,414,012)(15,314,228 - 15,314,362)
sequence
gaattccacttcatttccagtccatctcttaggtcatccaggcccagcag
ccttcttgagtaaaaagccatttcttcaatttagttttcttctccttctt
tgataatacaagtgtgccaaccactgagaaataaaagggcgtatactagc
aaaagctaatgcaccaggggacatctcaaagagccatcaaactggtctct
gtgaggagggctgattacttgtctacaaagataattttgcctgcagttag
cgtttccagtttatgaagtctctgaaggacattctttttgttttgttttg
gttttggttttttttttttttttttgattttttgagacagggtttctctg
tgtagtcctggctgtcctggaactcactctgtagacaaggctggcctcta
actcaaaaattcgactgcatctgccacccaagtcctcctgcaatctaatg
agcacaagagcgatctgctcattgtggttgcctctggaccctcggtctga
gctttctgttttccaactccttcactccctaagtttggctgtcttgaaaa
attttactatgtatacttttcagtctcaatatcctcactaggatattcat
ctttggcattggattttgtttgcctgtgttttctttctgtattttttttc
tcattttgtttgaaacaggagcttgagatgtagccaaggtgagcctcaaa
ctccatcatcccatgtcagcctcctgatcataggcatacagcaccatgaa
taattctgcttgagacaaagtcttactgtgtagccaaagatggtctgaat
cacctgctctactccagaatggtcttaaactcctgatcatcctacctcgg
actcctatgacttggtttaccacaatatctgggtggtgatgatattgttt
tcttgtttgcatgtgtgtgtgtgtttgtctgtgtgtgtgtgtgtgtgtga
gacatctactacatgtatgtttctgactgtgagtgagttatacactatca
aagcaacaatatggtagtctgagaatataaacctaaag
catttaaaacttgaagtctctggaagtggggagtagggggtgggagaggg
gagctagatttgcctatctaggaccatcttatctttctttttatggtgtt
gagaataaaatccttgaacttttagagctagttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_15412971_15414012
seq2: B6Ng01-121K14.b_50_1087 (reverse)

seq1  CTTTAGGTTTATATTCTCAGACTACCATATGTGTGCTTTGATAGTGTATA  50
      ||||||||||||||||||||||||||||||   |||||||||||||||||
seq2  CTTTAGGTTTATATTCTCAGACTACCATATTGTTGCTTTGATAGTGTATA  50

seq1  ACTTCACTCACAGTCAGAAACATACATGTAGTAGATGTACTACACACACA  100
      || ||||||||||||||||||||||||||||||||||| || ||||||||
seq2  AC-TCACTCACAGTCAGAAACATACATGTAGTAGATGT-CT-CACACACA  97

seq1  CACACACACACAGACAAACACACACACACATGCAAACAAGAAAACAATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACAGACAAACACACACACACATGCAAACAAGAAAACAATAT  147

seq1  CATCAACCACCCAGATATTGTGGTAAACCAAGTCATAGGAGTCCGAGGTA  200
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CATC-ACCACCCAGATATTGTGGTAAACCAAGTCATAGGAGTCCGAGGTA  196

seq1  GGATGATCAGGAGTTTAAGACCATTCTGGAGTAGAGCAGGTGATTCAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGATCAGGAGTTTAAGACCATTCTGGAGTAGAGCAGGTGATTCAGAC  246

seq1  CATCTTTGGCTACACAGTAAGACTTTGTCTCAAGCAGAATTATTCATGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTGGCTACACAGTAAGACTTTGTCTCAAGCAGAATTATTCATGGT  296

seq1  GCTGTATGCCTATGATCAGGAGGCTGACATGGGATGATGGAGTTTGAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTATGCCTATGATCAGGAGGCTGACATGGGATGATGGAGTTTGAGGC  346

seq1  TCACCTTGGCTACATCTCAAGCTCCTGTTTCAAACAAAATGAGAAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTTGGCTACATCTCAAGCTCCTGTTTCAAACAAAATGAGAAAAAAA  396

seq1  ATACAGAAAGAAAACACAGGCAAACAAAATCCAATGCCAAAGATGAATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGAAAGAAAACACAGGCAAACAAAATCCAATGCCAAAGATGAATAT  446

seq1  CCTAGTGAGGATATTGAGACTGAAAAGTATACATAGTAAAATTTTTCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTGAGGATATTGAGACTGAAAAGTATACATAGTAAAATTTTTCAAG  496

seq1  ACAGCCAAACTTAGGGAGTGAAGGAGTTGGAAAACAGAAAGCTCAGACCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCAAACTTAGGGAGTGAAGGAGTTGGAAAACAGAAAGCTCAGACCG  546

seq1  AGGGTCCAGAGGCAACCACAATGAGCAGATCGCTCTTGTGCTCATTAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCCAGAGGCAACCACAATGAGCAGATCGCTCTTGTGCTCATTAGAT  596

seq1  TGCAGGAGGACTTGGGTGGCAGATGCAGTCGAATTTTTGAGTTAGAGGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGAGGACTTGGGTGGCAGATGCAGTCGAATTTTTGAGTTAGAGGCC  646

seq1  AGCCTTGTCTACAGAGTGAGTTCCAGGACAGCCAGGACTACACAGAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTGTCTACAGAGTGAGTTCCAGGACAGCCAGGACTACACAGAGAAA  696

seq1  CCCTGTCTCAAAAAATCAAAAAAAAAAAAAAAAAACCAAAACCAAAACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTCTCAAAAAATCAAAAAAAAAAAAAAAAAACCAAAACCAAAACAA  746

seq1  AACAAAAAGAATGTCCTTCAGAGACTTCATAAACTGGAAACGCTAACTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAAGAATGTCCTTCAGAGACTTCATAAACTGGAAACGCTAACTGC  796

seq1  AGGCAAAATTATCTTTGTAGACAAGTAATCAGCCCTCCTCACAGAGACCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAAATTATCTTTGTAGACAAGTAATCAGCCCTCCTCACAGAGACCA  846

seq1  GTTTGATGGCTCTTTGAGATGTCCCCTGGTGCATTAGCTTTTGCTAGTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGATGGCTCTTTGAGATGTCCCCTGGTGCATTAGCTTTTGCTAGTAT  896

seq1  ACGCCCTTTTATTTCTCAGTGGTTGGCACACTTGTATTATCAAAGAAGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCCTTTTATTTCTCAGTGGTTGGCACACTTGTATTATCAAAGAAGGA  946

seq1  GAAGAAAACTAAATTGAAGAAATGGCTTTTTACTCAAGAAGGCTGCTGGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAACTAAATTGAAGAAATGGCTTTTTACTCAAGAAGGCTGCTGGG  996

seq1  CCTGGATGACCTAAGAGATGGACTGGAAATGAAGTGGAATTC  1042
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGATGACCTAAGAGATGGACTGGAAATGAAGTGGAATTC  1038

seq1: chr4_15314228_15314362
seq2: B6Ng01-121K14.g_74_208

seq1  CATTTAAAACTTGAAGTCTCTGGAAGTGGGGAGTAGGGGGTGGGAGAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAAACTTGAAGTCTCTGGAAGTGGGGAGTAGGGGGTGGGAGAGGG  50

seq1  GAGCTAGATTTGCCTATCTAGGACCATCTTATCTTTCTTTTTATGGTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTAGATTTGCCTATCTAGGACCATCTTATCTTTCTTTTTATGGTGTT  100

seq1  GAGAATAAAATCCTTGAACTTTTATAGCTAGTTCT  135
      |||||||||||||||||||||||| ||||||||||
seq2  GAGAATAAAATCCTTGAACTTTTAGAGCTAGTTCT  135