BAC Information

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BAC

Clone NameB6Ng01-122I23
Chromosome4 (Build37)
Map Location 71,682,551 - 71,838,309
singlet/doubletdoublet
Overlap geneTle1
Upstream geneLOC100039565, LOC100039979, LOC667638, EG667649
Downstream geneAldoa-ps2, EG384113, LOC667713, LOC100039698
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122I23.bB6Ng01-122I23.g
ACCDH925952DH925953
length1,183856
definitionDH925952|Mus musculus domesticus DNA, BAC clone: B6Ng01-122I23, 5' end.DH925953|Mus musculus domesticus DNA, BAC clone: B6Ng01-122I23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,837,120 - 71,838,309)(71,682,551 - 71,683,404)
sequence
gaattcattgggaggcagaggtagtcagatttttctgagtttgaggctag
cctggtcttaacagactcgtctggacaaaaagaaaaagaaggatcacaag
tactggattacaggcatatggtatcattctcagcgaacatctgcgcctgg
tatcctgttcacagtctctatagggtcccatggaacaggagttacaagaa
attccaccatgtagatgttagaaactgaacaccagacttctgtaagcaac
cagtgctttttcaccactgaaacatctctttagtctcatgtatatcatgt
ctacaactggaaacttcaagtgcatttgaaagagaatgaacagaatgatg
ctaggatgtttggaagttgggttatgagtactacacctggcatgtctcta
ctcctgtgtgcatttgctagtgtgttccctacacgaatcataccctctgc
ctgtacatgccctttataatgtgctctgtaatgctattccattggttgtc
aggagaattgggtttatataaatttaatcctatgaaaccaaagagctggt
ctgctcatggaaccagaatccagttggaagacaaaagacaactcctgcat
ataccttactgtaaagttcttggagttcttgctttctcatgggcatgacc
tgttcatcttataattttctgctcttgatcctttccccaacttctatctt
cattcttcttagtattaaatacctttgattggccttgaaatcattatgta
gtagaagaccttgaatttctccaactcccttatatatggtcatatctagt
cattaacccttagaggttcttgtatccattccctcaattgagctacatct
cttgtactctagatcctttctattacctaatctagtaataaaggcagcat
taagtattaagtattaagcatagacagaaaacgatgaaatataaggcttc
tttacagatgactttattgcctccttccctcctaatttgcctttctcctt
ccacttttgctctcctcttctttttccttgtttccaggtttaagttgctt
tagctagcagggactttccctgctttatttactagagactatacagctat
ttcagggcttctatgtgcttagctagcagtcttttcacgcaagggctggc
atttgtgtgaacactgccattttctccacatgt
gaattctttgattagctctgtaccccatttttaataggattatttggttc
tctggagtcttacttcttgagttctttgtatatgttggatactgggcctc
tatagggttggtaaagatcttttcccaacttgttggttgtcattttgtcc
tattgatagtgtcttgatcgttgacaaaggagctaaaaccatccagtggc
aaaaggacagcattttcaatgaatggtactggttcaactaatagttaaca
tgcagaagaatgcaaattgatccattcttatctccttgtacaaagttcaa
gtccaagtggatcaaggatctccacataaaaacagataaactgatactaa
tagaaaagaaagtggggaaagcctcaagcacatggacacagggaaatttt
tcctgaacagaataccaatagcttatgctctaagatcaagcattgacaaa
tgggacctctgaaaattacaaagcttctgtaagacactaagcaattttca
aaaatgctacaggaccaggaatggcactcagtgagcttcacatggatcct
ggatttcatccctagtccataaatttaagaaagtggggagagagggggaa
ttatttttggcaaaataaagatgtttgattcttctactcctcttttaaat
gatattaaaaaaataaagcatttaagaaaacagaaaggtaggcctcgttt
ggcaggttagtgcacaatccaagccaaatttgtagaagaaattgtgatct
ataacaagagccacactgagaggcaggtgtacatcgtagtcacaaagcca
aactatatagtgtccttgggaggtaaagctaggagtgctattggtggtgg
gtgttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_71837120_71838309
seq2: B6Ng01-122I23.b_49_1231 (reverse)

seq1  ACATGTTGAGAAAAT-GCAGTG-TCAC-CAAATGCCAAGCCCTTGC-TGA  46
      |||||| |||||||| |||||| |||| |||||||| ||||||||| |||
seq2  ACATGTGGAGAAAATGGCAGTGTTCACACAAATGCC-AGCCCTTGCGTGA  49

seq1  AAAGACCTTGGCTAGGCTAAGCACATAGGAGCCCTG-AATAGCTGTATAG  95
      ||||||    |||| ||||||||||||| ||||||| |||||||||||||
seq2  AAAGAC---TGCTA-GCTAAGCACATAGAAGCCCTGAAATAGCTGTATAG  95

seq1  TCTCTATGTAAATAAAGCAGGGAAAGTCCCTGCTTAGCTAAAGCAAACTT  145
      |||||| |||||||||||||||||||||||||| |||||||||| |||||
seq2  TCTCTA-GTAAATAAAGCAGGGAAAGTCCCTGC-TAGCTAAAGC-AACTT  142

seq1  AAAACCTGGAAACAAAGAAAAAGAAGAGGAGAGCAAAAGTGGAAGGGAGA  195
       |||||||||||||| |||||||||||||||||||||||||||| |||||
seq2  -AAACCTGGAAACAAGGAAAAAGAAGAGGAGAGCAAAAGTGGAA-GGAGA  190

seq1  AAGGCAAATTAGGAGGGAAGGAGGCAATAAAGTCATCTGTAAAGAAGCCT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAAATTAGGAGGGAAGGAGGCAATAAAGTCATCTGTAAAGAAGCCT  240

seq1  TTATTATTTCATCGTTTTCTGTCTATGCTTAATACTTAATACTTAATGCT  295
      |   ||||||||||||||||||||||||||||||||||||||||||||||
seq2  T--ATATTTCATCGTTTTCTGTCTATGCTTAATACTTAATACTTAATGCT  288

seq1  GCCTTTATTACTAGATTAGGTAATAGAAAGGATCTAGAGTACAAGAGATG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTATTACTAGATTAGGTAATAGAAAGGATCTAGAGTACAAGAGATG  338

seq1  TAGCTCAATTGAGGGAATGGATACAAGAACCTCTAAGGGTTAATGACTAG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCAATTGAGGGAATGGATACAAGAACCTCTAAGGGTTAATGACTAG  388

seq1  ATATGACCATATATAAGGGAGTTGGAGAAATTCAAGGTCTTCTACTACAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGACCATATATAAGGGAGTTGGAGAAATTCAAGGTCTTCTACTACAT  438

seq1  AATGATTTCAAGGCCAATCAAAGGTATTTAATACTAAGAAGAATGAAGAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTTCAAGGCCAATCAAAGGTATTTAATACTAAGAAGAATGAAGAT  488

seq1  AGAAGTTGGGGAAAGGATCAAGAGCAGAAAATTATAAGATGAACAGGTCA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTGGGGAAAGGATCAAGAGCAGAAAATTATAAGATGAACAGGTCA  538

seq1  TGCCCATGAGAAAGCAAGAACTCCAAGAACTTTACAGTAAGGTATATGCA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCATGAGAAAGCAAGAACTCCAAGAACTTTACAGTAAGGTATATGCA  588

seq1  GGAGTTGTCTTTTGTCTTCCAACTGGATTCTGGTTCCATGAGCAGACCAG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTGTCTTTTGTCTTCCAACTGGATTCTGGTTCCATGAGCAGACCAG  638

seq1  CTCTTTGGTTTCATAGGATTAAATTTATATAAACCCAATTCTCCTGACAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGGTTTCATAGGATTAAATTTATATAAACCCAATTCTCCTGACAA  688

seq1  CCAATGGAATAGCATTACAGAGCACATTATAAAGGGCATGTACAGGCAGA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGGAATAGCATTACAGAGCACATTATAAAGGGCATGTACAGGCAGA  738

seq1  GGGTATGATTCGTGTAGGGAACACACTAGCAAATGCACACAGGAGTAGAG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATGATTCGTGTAGGGAACACACTAGCAAATGCACACAGGAGTAGAG  788

seq1  ACATGCCAGGTGTAGTACTCATAACCCAACTTCCAAACATCCTAGCATCA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCCAGGTGTAGTACTCATAACCCAACTTCCAAACATCCTAGCATCA  838

seq1  TTCTGTTCATTCTCTTTCAAATGCACTTGAAGTTTCCAGTTGTAGACATG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTCATTCTCTTTCAAATGCACTTGAAGTTTCCAGTTGTAGACATG  888

seq1  ATATACATGAGACTAAAGAGATGTTTCAGTGGTGAAAAAGCACTGGTTGC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACATGAGACTAAAGAGATGTTTCAGTGGTGAAAAAGCACTGGTTGC  938

seq1  TTACAGAAGTCTGGTGTTCAGTTTCTAACATCTACATGGTGGAATTTCTT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGAAGTCTGGTGTTCAGTTTCTAACATCTACATGGTGGAATTTCTT  988

seq1  GTAACTCCTGTTCCATGGGACCCTATAGAGACTGTGAACAGGATACCAGG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTCCTGTTCCATGGGACCCTATAGAGACTGTGAACAGGATACCAGG  1038

seq1  CGCAGATGTTCGCTGAGAATGATACCATATGCCTGTAATCCAGTACTTGT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGATGTTCGCTGAGAATGATACCATATGCCTGTAATCCAGTACTTGT  1088

seq1  GATCCTTCTTTTTCTTTTTGTCCAGACGAGTCTGTTAAGACCAGGCTAGC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTTCTTTTTCTTTTTGTCCAGACGAGTCTGTTAAGACCAGGCTAGC  1138

seq1  CTCAAACTCAGAAAAATCTGACTACCTCTGCCTCCCAATGAATTC  1190
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACTCAGAAAAATCTGACTACCTCTGCCTCCCAATGAATTC  1183

seq1: chr4_71682551_71683404
seq2: B6Ng01-122I23.g_65_920

seq1  GAATTCTTTGATTAGCTCTGTACCCCATTTTTAATAGGATTATTTGGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGATTAGCTCTGTACCCCATTTTTAATAGGATTATTTGGTTC  50

seq1  TCTGGAGTCTTACTTCTTGAGTTCTTTGTATATGTTGGATACTGGGCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGTCTTACTTCTTGAGTTCTTTGTATATGTTGGATACTGGGCCTC  100

seq1  TATAGGGTTGGTAAAGATCTTTTCCCAACTTGTTGGTTGTCATTTTGTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGGTTGGTAAAGATCTTTTCCCAACTTGTTGGTTGTCATTTTGTCC  150

seq1  TATTGATAGTGTCTTGATCGTTGACAAAGGAGCTAAAACCATCCAGTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGATAGTGTCTTGATCGTTGACAAAGGAGCTAAAACCATCCAGTGGC  200

seq1  AAAAGGACAGCATTTTCAATGAATGGTACTGGTTCAACTAATAGTTAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGACAGCATTTTCAATGAATGGTACTGGTTCAACTAATAGTTAACA  250

seq1  TGCAGAAGAATGCAAATTGATCCATTCTTATCTCCTTGTACAAAGTTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAAGAATGCAAATTGATCCATTCTTATCTCCTTGTACAAAGTTCAA  300

seq1  GTCCAAGTGGATCAAGGATCTCCACATAAAAACAGATAAACTGATACTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAGTGGATCAAGGATCTCCACATAAAAACAGATAAACTGATACTAA  350

seq1  TAGAAAAGAAAGTGGGGAAAGCCTCAAGCACATGGACACAGGGAAATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAGAAAGTGGGGAAAGCCTCAAGCACATGGACACAGGGAAATTTT  400

seq1  TCCTGAACAGAATACCAATAGCTTATGCTCTAAGATCAAGCATTGACAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAACAGAATACCAATAGCTTATGCTCTAAGATCAAGCATTGACAAA  450

seq1  TGGGACCTCTGAAAATTACAAAGCTTCTGTAAGACACTAAGCAATTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACCTCTGAAAATTACAAAGCTTCTGTAAGACACTAAGCAATTTTCA  500

seq1  AAAATGCTACAGGACCAGGAATGGCACTCAGTGAGCTTCACATGGATCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGCTACAGGACCAGGAATGGCACTCAGTGAGCTTCACATGGATCCT  550

seq1  GGATTTCATCCCTAGTCCATAAATTTAAGAAAGTGGGGAGAGAGGGGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCATCCCTAGTCCATAAATTTAAGAAAGTGGGGAGAGAGGGGGAA  600

seq1  TTA-TTTTGGCAAAATAAAGATGTTTGATTCTTCTACTCCTCTTTTAAAT  649
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTGGCAAAATAAAGATGTTTGATTCTTCTACTCCTCTTTTAAAT  650

seq1  GATATTAAAAAAATAAAGCATTTAAG-AAACAGAAAGGTAGGCCTCGTTT  698
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GATATTAAAAAAATAAAGCATTTAAGAAAACAGAAAGGTAGGCCTCGTTT  700

seq1  GGCAGGTTAGTGCACAATCCAAAGCCAAA-TTGTAGAAGAAATTGTGATC  747
      |||||||||||||||||||| |||||||| ||||||||||||||||||||
seq2  GGCAGGTTAGTGCACAATCC-AAGCCAAATTTGTAGAAGAAATTGTGATC  749

seq1  TATAACAAGAGCCACACTGAGAGGCAGGTGTACATCGTAGTCACCAAGCC  797
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TATAACAAGAGCCACACTGAGAGGCAGGTGTACATCGTAGTCACAAAGCC  799

seq1  AAACTATATAGTGTCCTTGGGAGGTAAAGCTAGGAGTGCTATTGGTGGTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATATAGTGTCCTTGGGAGGTAAAGCTAGGAGTGCTATTGGTGGTG  849

seq1  GGTGTTG  854
      |||||||
seq2  GGTGTTG  856